RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 MYT1Q01538 1121 aa10.71□□□□□ -0.69
SKP2-203ENST00000504386 OVOS2Q6IE36 1432 aa10.71□□□□□ -0.69
SKP2-203ENST00000504386 CDCA7Q9BWT1 371 aaPredicted RBP10.71□□□□□ -0.69
SKP2-203ENST00000504386 STRN4Q9NRL3 753 aa10.71□□□□□ -0.69
SKP2-203ENST00000504386 NSD3Q9BZ95 1437 aa10.7□□□□□ -0.7
SKP2-203ENST00000504386 RTL1A6NKG5 1358 aa10.7□□□□□ -0.7
SKP2-203ENST00000504386 KIF24Q5T7B8 1368 aa10.7□□□□□ -0.7
SKP2-203ENST00000504386 ONECUT3O60422 494 aaPredicted RBP10.7□□□□□ -0.7
SKP2-203ENST00000504386 CSB-PGBD3P0DP91 1061 aa10.7□□□□□ -0.7
SKP2-203ENST00000504386 BARGINQ6ZT62 677 aa10.7□□□□□ -0.7
SKP2-203ENST00000504386 TCP11L2Q8N4U5 519 aa10.7□□□□□ -0.7
SKP2-203ENST00000504386 BLMP54132 1417 aaPredicted RBP10.69□□□□□ -0.7
SKP2-203ENST00000504386 CRB1P82279 1406 aa10.69□□□□□ -0.7
SKP2-203ENST00000504386 SPATA31A1Q5TZJ5 1347 aa10.69□□□□□ -0.7
SKP2-203ENST00000504386 WDR17Q8IZU2 1322 aa10.69□□□□□ -0.7
SKP2-203ENST00000504386 FYB1O15117 783 aa10.69□□□□□ -0.7
SKP2-203ENST00000504386 SOX12O15370 315 aa10.69□□□□□ -0.7
SKP2-203ENST00000504386 TOM1L2Q6ZVM7 507 aa10.69□□□□□ -0.7
SKP2-203ENST00000504386 CCDC125Q86Z20 511 aa10.69□□□□□ -0.7
SKP2-203ENST00000504386 RNF39Q9H2S5 420 aa10.69□□□□□ -0.7
SKP2-203ENST00000504386 KNSTRNQ9Y448 316 aa10.69□□□□□ -0.7
SKP2-203ENST00000504386 NFAT5O94916 1531 aa10.68□□□□□ -0.7
SKP2-203ENST00000504386 COL5A2P05997 1499 aaPredicted RBP10.68□□□□□ -0.7
SKP2-203ENST00000504386 NRAPQ86VF7 1730 aa10.68□□□□□ -0.7
SKP2-203ENST00000504386 AMPHP49418 695 aa10.68□□□□□ -0.7
SKP2-203ENST00000504386 SEPT12Q8IYM1 358 aa10.68□□□□□ -0.7
SKP2-203ENST00000504386 LMO7Q8WWI1 1683 aa10.68□□□□□ -0.7
SKP2-203ENST00000504386 SMG6Q86US8 1419 aaKnown RBP10.67□□□□□ -0.7
SKP2-203ENST00000504386 CCDC7Q96M83 1385 aa10.67□□□□□ -0.7
SKP2-203ENST00000504386 CAMTA1Q9Y6Y1 1673 aa10.67□□□□□ -0.7
SKP2-203ENST00000504386 KIF7Q2M1P5 1343 aa10.67□□□□□ -0.7
SKP2-203ENST00000504386 FAM98CQ17RN3 349 aaKnown RBP10.67□□□□□ -0.7
SKP2-203ENST00000504386 PANK3Q9H999 370 aa10.67□□□□□ -0.7
SKP2-203ENST00000504386 MYOM1P52179 1685 aa10.66□□□□□ -0.7
SKP2-203ENST00000504386 GLI3P10071 1580 aa10.66□□□□□ -0.7
SKP2-203ENST00000504386 LARP1Q6PKG0 1096 aaKnown RBP10.66□□□□□ -0.7
SKP2-203ENST00000504386 KRT27Q7Z3Y8 459 aa10.66□□□□□ -0.7
SKP2-203ENST00000504386 IP6K1Q92551 441 aa10.66□□□□□ -0.7
SKP2-203ENST00000504386 CARD10Q9BWT7 1032 aa10.66□□□□□ -0.7
SKP2-203ENST00000504386 CARD14Q9BXL6 1004 aa10.66□□□□□ -0.7
SKP2-203ENST00000504386 GGNBP2Q9H3C7 697 aa10.66□□□□□ -0.7
SKP2-203ENST00000504386 ERBB3P21860 1342 aa10.65□□□□□ -0.7
SKP2-203ENST00000504386 DCAF8L1A6NGE4 600 aa10.65□□□□□ -0.7
SKP2-203ENST00000504386 PDE3BQ13370 1112 aa10.65□□□□□ -0.7
SKP2-203ENST00000504386 SF3B2Q13435 895 aaKnown RBP10.65□□□□□ -0.7
SKP2-203ENST00000504386 USP35Q9P2H5 1018 aa10.65□□□□□ -0.7
SKP2-203ENST00000504386 FLT4P35916 1363 aa10.65□□□□□ -0.71
SKP2-203ENST00000504386 ZRANB1Q9UGI0 708 aa10.64□□□□□ -0.71
SKP2-203ENST00000504386 KIF20BQ96Q89 1820 aa10.63□□□□□ -0.71
SKP2-203ENST00000504386 MAP3K19Q56UN5 1328 aa10.63□□□□□ -0.71
SKP2-203ENST00000504386 HOXC9P31274 260 aa10.63□□□□□ -0.71
SKP2-203ENST00000504386 ANKRD24Q8TF21 1146 aa10.63□□□□□ -0.71
SKP2-203ENST00000504386 NLRP2Q9NX02 1062 aa10.63□□□□□ -0.71
SKP2-203ENST00000504386 AXIN2Q9Y2T1 843 aa10.63□□□□□ -0.71
SKP2-203ENST00000504386 FAM196AQ6ZSG2 479 aa10.62□□□□□ -0.71
SKP2-203ENST00000504386 MORC1Q86VD1 984 aa10.62□□□□□ -0.71
SKP2-203ENST00000504386 INSRP06213 1382 aa10.62□□□□□ -0.71
SKP2-203ENST00000504386 NPC1L1Q9UHC9 1359 aa10.62□□□□□ -0.71
SKP2-203ENST00000504386 WASHC2AQ641Q2 1341 aa10.61□□□□□ -0.71
SKP2-203ENST00000504386 FAM208AQ9UK61 1670 aaKnown RBP10.61□□□□□ -0.71
SKP2-203ENST00000504386 DDB1Q16531 1140 aa10.61□□□□□ -0.71
SKP2-203ENST00000504386 UPF1Q92900 1129 aaKnown RBP eCLIP10.61□□□□□ -0.712e-6■□□□□ 8.5
SKP2-203ENST00000504386 COL18A1P39060 1754 aa10.61□□□□□ -0.71
SKP2-203ENST00000504386 THSD7AQ9UPZ6 1657 aa10.6□□□□□ -0.71
SKP2-203ENST00000504386 EXOC5O00471 708 aa10.6□□□□□ -0.71
SKP2-203ENST00000504386 IL2RBP14784 551 aa10.6□□□□□ -0.71
SKP2-203ENST00000504386 LTN1O94822 1766 aa10.6□□□□□ -0.71
SKP2-203ENST00000504386 RRS1Q15050 365 aaKnown RBP10.59□□□□□ -0.71
SKP2-203ENST00000504386 OVOS2A0A0G2JMS6 1433 aa10.58□□□□□ -0.72
SKP2-203ENST00000504386 PLEKHG2Q9H7P9 1386 aa10.58□□□□□ -0.72
SKP2-203ENST00000504386 PPM1GO15355 546 aaPredicted RBP10.58□□□□□ -0.72
SKP2-203ENST00000504386 BAG6P46379 1132 aa10.58□□□□□ -0.72
SKP2-203ENST00000504386 RAPGEF4Q8WZA2 1011 aa10.58□□□□□ -0.72
SKP2-203ENST00000504386 LTV1Q96GA3 475 aaPredicted RBP10.58□□□□□ -0.72
SKP2-203ENST00000504386 AMER1Q5JTC6 1135 aaPredicted RBP10.57□□□□□ -0.72
SKP2-203ENST00000504386 ANKRD26Q9UPS8 1709 aa10.57□□□□□ -0.72
SKP2-203ENST00000504386 BCL9O00512 1426 aa10.57□□□□□ -0.72
SKP2-203ENST00000504386 PARP4Q9UKK3 1724 aaKnown RBP10.56□□□□□ -0.72
SKP2-203ENST00000504386 HMGB2P26583 209 aaKnown RBP10.56□□□□□ -0.72
SKP2-203ENST00000504386 POLKQ9UBT6 870 aa10.56□□□□□ -0.72
SKP2-203ENST00000504386 DISP2A7MBM2 1401 aa10.56□□□□□ -0.72
SKP2-203ENST00000504386 TNS2Q63HR2 1409 aa10.56□□□□□ -0.72
SKP2-203ENST00000504386 PARD3Q8TEW0 1356 aa10.55□□□□□ -0.72
SKP2-203ENST00000504386 PER1O15534 1290 aaPredicted RBP10.55□□□□□ -0.72
SKP2-203ENST00000504386 TATP17735 454 aaPredicted RBP10.55□□□□□ -0.72
SKP2-203ENST00000504386 TNNT2P45379 298 aaPredicted RBP10.55□□□□□ -0.72
SKP2-203ENST00000504386 HSP90AB2PQ58FF8 381 aa10.55□□□□□ -0.72
SKP2-203ENST00000504386 EMILIN1Q9Y6C2 1016 aa10.55□□□□□ -0.72
SKP2-203ENST00000504386 CFAP53Q96M91 514 aa10.54□□□□□ -0.72
SKP2-203ENST00000504386 BRWD3Q6RI45 1802 aa10.53□□□□□ -0.72
SKP2-203ENST00000504386 RGPD5Q99666 1765 aa10.52□□□□□ -0.72
SKP2-203ENST00000504386 LRRC37A3O60309 1634 aa10.52□□□□□ -0.73
SKP2-203ENST00000504386 FBLN1P23142 703 aa10.52□□□□□ -0.73
SKP2-203ENST00000504386 CC2D1BQ5T0F9 858 aaKnown RBP10.52□□□□□ -0.73
SKP2-203ENST00000504386 NBPF6Q5VWK0 638 aa10.52□□□□□ -0.73
SKP2-203ENST00000504386 ZCRB1Q8TBF4 217 aaKnown RBP10.52□□□□□ -0.73
SKP2-203ENST00000504386 NBPF4Q96M43 638 aa10.52□□□□□ -0.73
SKP2-203ENST00000504386 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.52□□□□□ -0.73
SKP2-203ENST00000504386 SPG7Q9UQ90 795 aa10.52□□□□□ -0.73
SKP2-203ENST00000504386 PCDH11XQ9BZA7 1347 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms