RNA–Protein interactions for RNA: ENST00000497809.1

NEB-216, Transcript of nebulin, humanhuman

TSL 2

Gene NEB, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-216ENST00000497809 H3BRB1 525 aa9.61□□□□□ -0.87
NEB-216ENST00000497809 FOXK1P85037 733 aa9.61□□□□□ -0.87
NEB-216ENST00000497809 EAPPQ56P03 285 aaPredicted RBP9.61□□□□□ -0.87
NEB-216ENST00000497809 LCE2DQ5TA82 110 aaPredicted RBP9.61□□□□□ -0.87
NEB-216ENST00000497809 FMNL3Q8IVF7 1028 aa9.61□□□□□ -0.87
NEB-216ENST00000497809 CABLES1Q8TDN4 633 aa9.61□□□□□ -0.87
NEB-216ENST00000497809 MTA3Q9BTC8 594 aa9.61□□□□□ -0.87
NEB-216ENST00000497809 TUT1Q9H6E5 874 aaKnown RBP9.61□□□□□ -0.87
NEB-216ENST00000497809 NLRP2Q9NX02 1062 aa9.61□□□□□ -0.87
NEB-216ENST00000497809 PIK3CDO00329 1044 aa9.61□□□□□ -0.87
NEB-216ENST00000497809 MCCP23508 829 aa9.61□□□□□ -0.87
NEB-216ENST00000497809 HSD3B2P26439 372 aa9.61□□□□□ -0.87
NEB-216ENST00000497809 FAM161BQ96MY7 647 aa9.61□□□□□ -0.87
NEB-216ENST00000497809 OSBPL2Q9H1P3 480 aa9.61□□□□□ -0.87
NEB-216ENST00000497809 CCSER2Q9H7U1 834 aa9.61□□□□□ -0.87
NEB-216ENST00000497809 DDX56Q9NY93 547 aaKnown RBP9.61□□□□□ -0.87
NEB-216ENST00000497809 TRPC6Q9Y210 931 aa9.61□□□□□ -0.87
NEB-216ENST00000497809 MOXD2PA6NHM9 499 aa9.6□□□□□ -0.87
NEB-216ENST00000497809 KRBA2Q6ZNG9 492 aa9.6□□□□□ -0.87
NEB-216ENST00000497809 GMLQ99445 158 aa9.6□□□□□ -0.87
NEB-216ENST00000497809 TGIF2Q9GZN2 237 aa9.6□□□□□ -0.87
NEB-216ENST00000497809 GNL3LQ9NVN8 582 aaKnown RBP9.6□□□□□ -0.87
NEB-216ENST00000497809 SEC24BO95487 1268 aa9.59□□□□□ -0.87
NEB-216ENST00000497809 FANCCQ00597 558 aa9.59□□□□□ -0.87
NEB-216ENST00000497809 SEMA3FQ13275 785 aa9.59□□□□□ -0.87
NEB-216ENST00000497809 TMEM87AQ8NBN3 555 aa9.59□□□□□ -0.87
NEB-216ENST00000497809 RPS6KC1Q96S38 1066 aa9.59□□□□□ -0.87
NEB-216ENST00000497809 ABL1P00519 1130 aa9.59□□□□□ -0.87
NEB-216ENST00000497809 S100BP04271 92 aaPredicted RBP9.59□□□□□ -0.87
NEB-216ENST00000497809 IER5LQ5T953 404 aa9.59□□□□□ -0.87
NEB-216ENST00000497809 EPS8L1Q8TE68 723 aa9.59□□□□□ -0.87
NEB-216ENST00000497809 TTLL13PA6NNM8 815 aa9.58□□□□□ -0.88
NEB-216ENST00000497809 LZTS3O60299 673 aaPredicted RBP9.58□□□□□ -0.88
NEB-216ENST00000497809 KIF4AO95239 1232 aa9.58□□□□□ -0.88
NEB-216ENST00000497809 NDUFV2P19404 249 aa9.58□□□□□ -0.88
NEB-216ENST00000497809 EVA1CP58658 441 aa9.58□□□□□ -0.88
NEB-216ENST00000497809 BIRC2Q13490 618 aa9.58□□□□□ -0.88
NEB-216ENST00000497809 ERICH6BQ5W0A0 696 aa9.58□□□□□ -0.88
NEB-216ENST00000497809 USP17L15C9J2P7 530 aa9.57□□□□□ -0.88
NEB-216ENST00000497809 USP17L10C9JJH3 530 aa9.57□□□□□ -0.88
NEB-216ENST00000497809 USP17L13C9JLJ4 530 aa9.57□□□□□ -0.88
NEB-216ENST00000497809 USP17L12C9JPN9 530 aa9.57□□□□□ -0.88
NEB-216ENST00000497809 USP17L11C9JVI0 530 aa9.57□□□□□ -0.88
NEB-216ENST00000497809 USP17L21D6R901 530 aa9.57□□□□□ -0.88
NEB-216ENST00000497809 USP17L18D6R9N7 530 aa9.57□□□□□ -0.88
NEB-216ENST00000497809 USP17L22D6RA61 530 aa9.57□□□□□ -0.88
NEB-216ENST00000497809 USP17L17D6RBQ6 530 aa9.57□□□□□ -0.88
NEB-216ENST00000497809 USP17L19D6RCP7 530 aa9.57□□□□□ -0.88
NEB-216ENST00000497809 USP17L20D6RJB6 530 aa9.57□□□□□ -0.88
NEB-216ENST00000497809 USP17L24Q0WX57 530 aa9.57□□□□□ -0.88
NEB-216ENST00000497809 ECM1Q16610 540 aa9.57□□□□□ -0.88
NEB-216ENST00000497809 PLPP6Q8IY26 295 aa9.57□□□□□ -0.88
NEB-216ENST00000497809 UPF1Q92900 1129 aaKnown RBP eCLIP9.57□□□□□ -0.88
NEB-216ENST00000497809 SOX11P35716 441 aa9.57□□□□□ -0.88
NEB-216ENST00000497809 P4HBP07237 508 aaKnown RBP9.56□□□□□ -0.88
NEB-216ENST00000497809 SLFNL1Q499Z3 407 aa9.56□□□□□ -0.88
NEB-216ENST00000497809 CCAR1Q8IX12 1150 aaKnown RBP9.56□□□□□ -0.88
NEB-216ENST00000497809 HELBQ8NG08 1087 aaPredicted RBP9.56□□□□□ -0.88
NEB-216ENST00000497809 WDHD1O75717 1129 aaPredicted RBP9.55□□□□□ -0.88
NEB-216ENST00000497809 CTDSPL2Q05D32 466 aa9.55□□□□□ -0.88
NEB-216ENST00000497809 JDP2Q8WYK2 163 aa9.55□□□□□ -0.88
NEB-216ENST00000497809 RNF19AQ9NV58 838 aa9.55□□□□□ -0.88
NEB-216ENST00000497809 DCTN4Q9UJW0 460 aa9.55□□□□□ -0.88
NEB-216ENST00000497809 USP17L3A6NCW0 530 aa9.55□□□□□ -0.88
NEB-216ENST00000497809 USP17L4A6NCW7 530 aa9.55□□□□□ -0.88
NEB-216ENST00000497809 NUTM2BA6NNL0 878 aaPredicted RBP9.55□□□□□ -0.88
NEB-216ENST00000497809 NUTM2EB1AL46 878 aaPredicted RBP9.55□□□□□ -0.88
NEB-216ENST00000497809 NUTM2DQ5VT03 806 aaPredicted RBP9.55□□□□□ -0.88
NEB-216ENST00000497809 USP17L2Q6R6M4 530 aa9.55□□□□□ -0.88
NEB-216ENST00000497809 USP17L1Q7RTZ2 530 aa9.55□□□□□ -0.88
NEB-216ENST00000497809 NUTM2AQ8IVF1 878 aaPredicted RBP9.55□□□□□ -0.88
NEB-216ENST00000497809 PXYLP1Q8TE99 480 aa9.55□□□□□ -0.88
NEB-216ENST00000497809 CCDC189A1A4V9 331 aa9.54□□□□□ -0.88
NEB-216ENST00000497809 FAM196BA6NMK8 535 aa9.54□□□□□ -0.88
NEB-216ENST00000497809 COL19A1Q14993 1142 aa9.54□□□□□ -0.88
NEB-216ENST00000497809 COLQQ9Y215 455 aaPredicted RBP9.54□□□□□ -0.88
NEB-216ENST00000497809 CCER2I3L3R5 266 aa9.53□□□□□ -0.88
NEB-216ENST00000497809 ICMTO60725 284 aa9.53□□□□□ -0.88
NEB-216ENST00000497809 DEPDC4Q8N2C3 294 aa9.53□□□□□ -0.88
NEB-216ENST00000497809 LRRN4Q8WUT4 740 aa9.53□□□□□ -0.88
NEB-216ENST00000497809 SPC25Q9HBM1 224 aa9.53□□□□□ -0.88
NEB-216ENST00000497809 GYS2P54840 703 aa9.52□□□□□ -0.89
NEB-216ENST00000497809 AMPD3Q01432 767 aa9.52□□□□□ -0.89
NEB-216ENST00000497809 PTK7Q13308 1070 aa9.52□□□□□ -0.89
NEB-216ENST00000497809 GLYCTKQ8IVS8 523 aa9.52□□□□□ -0.89
NEB-216ENST00000497809 TSC1Q92574 1164 aa9.52□□□□□ -0.89
NEB-216ENST00000497809 RNF34Q969K3 372 aa9.52□□□□□ -0.89
NEB-216ENST00000497809 TRIM35Q9UPQ4 493 aa9.52□□□□□ -0.89
NEB-216ENST00000497809 PRC1O43663 620 aa9.52□□□□□ -0.89
NEB-216ENST00000497809 BDNFP23560 247 aa9.52□□□□□ -0.89
NEB-216ENST00000497809 EGFL7Q9UHF1 273 aa9.52□□□□□ -0.89
NEB-216ENST00000497809 DNAJC6O75061 913 aa9.51□□□□□ -0.89
NEB-216ENST00000497809 ZSCAN29Q8IWY8 852 aaPredicted RBP9.51□□□□□ -0.89
NEB-216ENST00000497809 TTF2Q9UNY4 1162 aaKnown RBP9.51□□□□□ -0.89
NEB-216ENST00000497809 SALL2Q9Y467 1007 aaPredicted RBP9.51□□□□□ -0.89
NEB-216ENST00000497809 PPP4CP60510 307 aa9.5□□□□□ -0.89
NEB-216ENST00000497809 ARHGAP4P98171 946 aa9.5□□□□□ -0.89
NEB-216ENST00000497809 GLIPR1L2Q4G1C9 344 aa9.5□□□□□ -0.89
NEB-216ENST00000497809 FAM200AQ8TCP9 573 aa9.5□□□□□ -0.89
NEB-216ENST00000497809 PNISRQ8TF01 805 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms