RNA–Protein interactions for RNA: ENST00000495805.5

PSMB4-207, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 811 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-207ENST00000495805 FAM98CQ17RN3 349 aaKnown RBP18.58■□□□□ 0.56
PSMB4-207ENST00000495805 LARP1Q6PKG0 1096 aaKnown RBP18.58■□□□□ 0.56
PSMB4-207ENST00000495805 SEPT12Q8IYM1 358 aa18.58■□□□□ 0.56
PSMB4-207ENST00000495805 PANK3Q9H999 370 aa18.58■□□□□ 0.56
PSMB4-207ENST00000495805 ABCC6O95255 1503 aa18.58■□□□□ 0.56
PSMB4-207ENST00000495805 COL5A2P05997 1499 aaPredicted RBP18.58■□□□□ 0.56
PSMB4-207ENST00000495805 KIF7Q2M1P5 1343 aa18.57■□□□□ 0.56
PSMB4-207ENST00000495805 CSB-PGBD3P0DP91 1061 aa18.56■□□□□ 0.56
PSMB4-207ENST00000495805 USP35Q9P2H5 1018 aa18.56■□□□□ 0.56
PSMB4-207ENST00000495805 AXIN2Q9Y2T1 843 aa18.56■□□□□ 0.56
PSMB4-207ENST00000495805 THRAP3Q9Y2W1 955 aaKnown RBP18.56■□□□□ 0.56
PSMB4-207ENST00000495805 TOM1L2Q6ZVM7 507 aa18.55■□□□□ 0.56
PSMB4-207ENST00000495805 TCP11L2Q8N4U5 519 aa18.55■□□□□ 0.56
PSMB4-207ENST00000495805 CRB1P82279 1406 aa18.55■□□□□ 0.56
PSMB4-207ENST00000495805 WDR17Q8IZU2 1322 aa18.54■□□□□ 0.56
PSMB4-207ENST00000495805 BARGINQ6ZT62 677 aa18.54■□□□□ 0.56
PSMB4-207ENST00000495805 KNSTRNQ9Y448 316 aa18.54■□□□□ 0.56
PSMB4-207ENST00000495805 COL18A1P39060 1754 aa18.54■□□□□ 0.56
PSMB4-207ENST00000495805 KIF20BQ96Q89 1820 aa18.53■□□□□ 0.56
PSMB4-207ENST00000495805 AMPHP49418 695 aa18.53■□□□□ 0.56
PSMB4-207ENST00000495805 IP6K1Q92551 441 aa18.53■□□□□ 0.56
PSMB4-207ENST00000495805 ZEB1P37275 1124 aaPredicted RBP18.52■□□□□ 0.56
PSMB4-207ENST00000495805 BLMP54132 1417 aaPredicted RBP18.51■□□□□ 0.55
PSMB4-207ENST00000495805 LTN1O94822 1766 aa18.51■□□□□ 0.55
PSMB4-207ENST00000495805 KRT27Q7Z3Y8 459 aa18.51■□□□□ 0.55
PSMB4-207ENST00000495805 CCDC7Q96M83 1385 aa18.51■□□□□ 0.55
PSMB4-207ENST00000495805 MAP3K19Q56UN5 1328 aa18.5■□□□□ 0.55
PSMB4-207ENST00000495805 CARD10Q9BWT7 1032 aa18.5■□□□□ 0.55
PSMB4-207ENST00000495805 NSD2O96028 1365 aa18.5■□□□□ 0.55
PSMB4-207ENST00000495805 ANKRD24Q8TF21 1146 aa18.49■□□□□ 0.55
PSMB4-207ENST00000495805 UPF1Q92900 1129 aaKnown RBP eCLIP18.49■□□□□ 0.55
PSMB4-207ENST00000495805 ERBB3P21860 1342 aa18.49■□□□□ 0.55
PSMB4-207ENST00000495805 WASHC2AQ641Q2 1341 aa18.49■□□□□ 0.55
PSMB4-207ENST00000495805 EP400Q96L91 3159 aa18.48■□□□□ 0.55
PSMB4-207ENST00000495805 RTL1A6NKG5 1358 aa18.48■□□□□ 0.55
PSMB4-207ENST00000495805 KIF24Q5T7B8 1368 aa18.48■□□□□ 0.55
PSMB4-207ENST00000495805 FBLN1P23142 703 aa18.48■□□□□ 0.55
PSMB4-207ENST00000495805 HOXC9P31274 260 aa18.48■□□□□ 0.55
PSMB4-207ENST00000495805 RRS1Q15050 365 aaKnown RBP18.48■□□□□ 0.55
PSMB4-207ENST00000495805 CDCA7Q9BWT1 371 aaPredicted RBP18.48■□□□□ 0.55
PSMB4-207ENST00000495805 NLRP2Q9NX02 1062 aa18.48■□□□□ 0.55
PSMB4-207ENST00000495805 PDE3BQ13370 1112 aa18.47■□□□□ 0.55
PSMB4-207ENST00000495805 RGPD5Q99666 1765 aa18.46■□□□□ 0.55
PSMB4-207ENST00000495805 CCDC125Q86Z20 511 aa18.46■□□□□ 0.55
PSMB4-207ENST00000495805 THSD7AQ9UPZ6 1657 aa18.46■□□□□ 0.55
PSMB4-207ENST00000495805 MORC1Q86VD1 984 aa18.45■□□□□ 0.54
PSMB4-207ENST00000495805 SMG6Q86US8 1419 aaKnown RBP18.44■□□□□ 0.54
PSMB4-207ENST00000495805 LTV1Q96GA3 475 aaPredicted RBP18.44■□□□□ 0.54
PSMB4-207ENST00000495805 BRWD3Q6RI45 1802 aa18.44■□□□□ 0.54
PSMB4-207ENST00000495805 FLT4P35916 1363 aa18.43■□□□□ 0.54
PSMB4-207ENST00000495805 PPM1GO15355 546 aaPredicted RBP18.43■□□□□ 0.54
PSMB4-207ENST00000495805 TNNT2P45379 298 aaPredicted RBP18.42■□□□□ 0.54
PSMB4-207ENST00000495805 DDB1Q16531 1140 aa18.42■□□□□ 0.54
PSMB4-207ENST00000495805 INSRP06213 1382 aa18.42■□□□□ 0.54
PSMB4-207ENST00000495805 ANKRD26Q9UPS8 1709 aa18.41■□□□□ 0.54
PSMB4-207ENST00000495805 PER1O15534 1290 aaPredicted RBP18.41■□□□□ 0.54
PSMB4-207ENST00000495805 EMILIN1Q9Y6C2 1016 aa18.41■□□□□ 0.54
PSMB4-207ENST00000495805 EXOC5O00471 708 aa18.4■□□□□ 0.54
PSMB4-207ENST00000495805 SF3B2Q13435 895 aaKnown RBP18.4■□□□□ 0.54
PSMB4-207ENST00000495805 HSP90AB2PQ58FF8 381 aa18.4■□□□□ 0.54
PSMB4-207ENST00000495805 AMER1Q5JTC6 1135 aaPredicted RBP18.4■□□□□ 0.54
PSMB4-207ENST00000495805 FAM196AQ6ZSG2 479 aa18.4■□□□□ 0.54
PSMB4-207ENST00000495805 POLKQ9UBT6 870 aa18.4■□□□□ 0.54
PSMB4-207ENST00000495805 FAM208AQ9UK61 1670 aaKnown RBP18.4■□□□□ 0.54
PSMB4-207ENST00000495805 IL2RBP14784 551 aa18.39■□□□□ 0.53
PSMB4-207ENST00000495805 PARP4Q9UKK3 1724 aaKnown RBP18.39■□□□□ 0.53
PSMB4-207ENST00000495805 FAM182BQ5T319 152 aa18.37■□□□□ 0.53
PSMB4-207ENST00000495805 DISP2A7MBM2 1401 aa18.36■□□□□ 0.53
PSMB4-207ENST00000495805 NPC1L1Q9UHC9 1359 aa18.35■□□□□ 0.53
PSMB4-207ENST00000495805 CC2D1BQ5T0F9 858 aaKnown RBP18.35■□□□□ 0.53
PSMB4-207ENST00000495805 MAP2P11137 1827 aaKnown RBP18.35■□□□□ 0.53
PSMB4-207ENST00000495805 PEAK1Q9H792 1746 aa18.35■□□□□ 0.53
PSMB4-207ENST00000495805 NBPF6Q5VWK0 638 aa18.34■□□□□ 0.53
PSMB4-207ENST00000495805 NBPF4Q96M43 638 aa18.34■□□□□ 0.53
PSMB4-207ENST00000495805 WNK3Q9BYP7 1800 aa18.34■□□□□ 0.53
PSMB4-207ENST00000495805 LRRC37A3O60309 1634 aa18.33■□□□□ 0.52
PSMB4-207ENST00000495805 OVOS2A0A0G2JMS6 1433 aa18.32■□□□□ 0.52
PSMB4-207ENST00000495805 RAPGEF4Q8WZA2 1011 aa18.32■□□□□ 0.52
PSMB4-207ENST00000495805 TNS2Q63HR2 1409 aa18.32■□□□□ 0.52
PSMB4-207ENST00000495805 TRIM37O94972 964 aa18.3■□□□□ 0.52
PSMB4-207ENST00000495805 BAG6P46379 1132 aa18.3■□□□□ 0.52
PSMB4-207ENST00000495805 MARCH10Q8NA82 808 aaPredicted RBP18.3■□□□□ 0.52
PSMB4-207ENST00000495805 TATP17735 454 aaPredicted RBP18.29■□□□□ 0.52
PSMB4-207ENST00000495805 CNGB1Q14028 1251 aaPredicted RBP18.29■□□□□ 0.52
PSMB4-207ENST00000495805 USHBP1Q8N6Y0 703 aa18.29■□□□□ 0.52
PSMB4-207ENST00000495805 EIF4A2Q14240 407 aaKnown RBP18.28■□□□□ 0.52
PSMB4-207ENST00000495805 ZCRB1Q8TBF4 217 aaKnown RBP18.28■□□□□ 0.52
PSMB4-207ENST00000495805 RGPD1P0DJD0 1748 aa18.27■□□□□ 0.52
PSMB4-207ENST00000495805 BCL9O00512 1426 aa18.27■□□□□ 0.52
PSMB4-207ENST00000495805 MTHFSP49914 203 aa18.27■□□□□ 0.52
PSMB4-207ENST00000495805 EYA1Q99502 592 aa18.27■□□□□ 0.52
PSMB4-207ENST00000495805 DDX54Q8TDD1 881 aaKnown RBP18.26■□□□□ 0.51
PSMB4-207ENST00000495805 RGPD2P0DJD1 1756 aa18.26■□□□□ 0.51
PSMB4-207ENST00000495805 APBA3O96018 575 aa18.25■□□□□ 0.51
PSMB4-207ENST00000495805 DEFB132Q7Z7B7 95 aa18.24■□□□□ 0.51
PSMB4-207ENST00000495805 BCL11BQ9C0K0 894 aaPredicted RBP18.24■□□□□ 0.51
PSMB4-207ENST00000495805 MEGF6O75095 1541 aa18.23■□□□□ 0.51
PSMB4-207ENST00000495805 NCAPD2Q15021 1401 aa18.23■□□□□ 0.51
PSMB4-207ENST00000495805 DDX10Q13206 875 aaKnown RBP18.22■□□□□ 0.51
PSMB4-207ENST00000495805 SPG7Q9UQ90 795 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms