RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 CSB-PGBD3P0DP91 1061 aa12.78□□□□□ -0.36
ACTN4-207ENST00000495553 AMPHP49418 695 aa12.78□□□□□ -0.36
ACTN4-207ENST00000495553 AXIN2Q9Y2T1 843 aa12.78□□□□□ -0.36
ACTN4-207ENST00000495553 COL14A1Q05707 1796 aaKnown RBP12.78□□□□□ -0.36
ACTN4-207ENST00000495553 PARD3Q8TEW0 1356 aa12.78□□□□□ -0.36
ACTN4-207ENST00000495553 A0A0G2JS52 829 aa12.77□□□□□ -0.37
ACTN4-207ENST00000495553 FBLN1P23142 703 aa12.77□□□□□ -0.37
ACTN4-207ENST00000495553 MYT1Q01538 1121 aa12.77□□□□□ -0.37
ACTN4-207ENST00000495553 RRS1Q15050 365 aaKnown RBP12.77□□□□□ -0.37
ACTN4-207ENST00000495553 LARP1Q6PKG0 1096 aaKnown RBP12.77□□□□□ -0.37
ACTN4-207ENST00000495553 USP35Q9P2H5 1018 aa12.77□□□□□ -0.37
ACTN4-207ENST00000495553 SPATA31A5Q5VU36 1347 aa12.77□□□□□ -0.37
ACTN4-207ENST00000495553 SPATA31A7Q8IWB4 1347 aa12.77□□□□□ -0.37
ACTN4-207ENST00000495553 NFAT5O94916 1531 aa12.77□□□□□ -0.37
ACTN4-207ENST00000495553 CRYBG1Q9Y4K1 1723 aa12.76□□□□□ -0.37
ACTN4-207ENST00000495553 CCER2I3L3R5 266 aa12.76□□□□□ -0.37
ACTN4-207ENST00000495553 TNNT2P45379 298 aaPredicted RBP12.76□□□□□ -0.37
ACTN4-207ENST00000495553 FAM98CQ17RN3 349 aaKnown RBP12.76□□□□□ -0.37
ACTN4-207ENST00000495553 TOM1L2Q6ZVM7 507 aa12.76□□□□□ -0.37
ACTN4-207ENST00000495553 MIER1Q8N108 512 aa12.76□□□□□ -0.37
ACTN4-207ENST00000495553 IP6K1Q92551 441 aa12.76□□□□□ -0.37
ACTN4-207ENST00000495553 CFAP53Q96M91 514 aa12.76□□□□□ -0.37
ACTN4-207ENST00000495553 MAP3K19Q56UN5 1328 aa12.76□□□□□ -0.37
ACTN4-207ENST00000495553 ANKRD26Q9UPS8 1709 aa12.76□□□□□ -0.37
ACTN4-207ENST00000495553 MARF1Q9Y4F3 1742 aaKnown RBP12.76□□□□□ -0.37
ACTN4-207ENST00000495553 SPATA31A1Q5TZJ5 1347 aa12.75□□□□□ -0.37
ACTN4-207ENST00000495553 CAMTA1Q9Y6Y1 1673 aa12.75□□□□□ -0.37
ACTN4-207ENST00000495553 COL5A2P05997 1499 aaPredicted RBP12.74□□□□□ -0.37
ACTN4-207ENST00000495553 CDK12Q9NYV4 1490 aaPredicted RBP12.74□□□□□ -0.37
ACTN4-207ENST00000495553 WDR17Q8IZU2 1322 aa12.74□□□□□ -0.37
ACTN4-207ENST00000495553 PPM1GO15355 546 aaPredicted RBP12.74□□□□□ -0.37
ACTN4-207ENST00000495553 HOXC9P31274 260 aa12.74□□□□□ -0.37
ACTN4-207ENST00000495553 TCP11L2Q8N4U5 519 aa12.74□□□□□ -0.37
ACTN4-207ENST00000495553 LTV1Q96GA3 475 aaPredicted RBP12.74□□□□□ -0.37
ACTN4-207ENST00000495553 PPP2R1AP30153 589 aa12.73□□□□□ -0.37
ACTN4-207ENST00000495553 SEPT12Q8IYM1 358 aa12.73□□□□□ -0.37
ACTN4-207ENST00000495553 ANKRD24Q8TF21 1146 aa12.73□□□□□ -0.37
ACTN4-207ENST00000495553 NLRP2Q9NX02 1062 aa12.73□□□□□ -0.37
ACTN4-207ENST00000495553 NWD2Q9ULI1 1742 aa12.73□□□□□ -0.37
ACTN4-207ENST00000495553 PLCH1Q4KWH8 1693 aa12.73□□□□□ -0.37
ACTN4-207ENST00000495553 RGS12O14924 1447 aa12.72□□□□□ -0.37
ACTN4-207ENST00000495553 ERBB3P21860 1342 aa12.72□□□□□ -0.37
ACTN4-207ENST00000495553 ONECUT3O60422 494 aaPredicted RBP12.72□□□□□ -0.37
ACTN4-207ENST00000495553 MRS2Q9HD23 443 aa12.72□□□□□ -0.37
ACTN4-207ENST00000495553 THRAP3Q9Y2W1 955 aaKnown RBP12.72□□□□□ -0.37
ACTN4-207ENST00000495553 EMILIN1Q9Y6C2 1016 aa12.72□□□□□ -0.37
ACTN4-207ENST00000495553 BLMP54132 1417 aaPredicted RBP12.71□□□□□ -0.37
ACTN4-207ENST00000495553 CRB1P82279 1406 aa12.71□□□□□ -0.37
ACTN4-207ENST00000495553 RTL1A6NKG5 1358 aa12.71□□□□□ -0.37
ACTN4-207ENST00000495553 USP54Q70EL1 1684 aa12.71□□□□□ -0.37
ACTN4-207ENST00000495553 BARGINQ6ZT62 677 aa12.71□□□□□ -0.37
ACTN4-207ENST00000495553 CARD10Q9BWT7 1032 aa12.71□□□□□ -0.37
ACTN4-207ENST00000495553 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.71□□□□□ -0.38
ACTN4-207ENST00000495553 FLT4P35916 1363 aa12.7□□□□□ -0.38
ACTN4-207ENST00000495553 KIF24Q5T7B8 1368 aa12.7□□□□□ -0.38
ACTN4-207ENST00000495553 SOCS7O14512 581 aa12.7□□□□□ -0.38
ACTN4-207ENST00000495553 HSP90AB2PQ58FF8 381 aa12.7□□□□□ -0.38
ACTN4-207ENST00000495553 POLKQ9UBT6 870 aa12.7□□□□□ -0.38
ACTN4-207ENST00000495553 ABCC6O95255 1503 aa12.7□□□□□ -0.38
ACTN4-207ENST00000495553 LMO7Q8WWI1 1683 aa12.7□□□□□ -0.38
ACTN4-207ENST00000495553 MTHFSP49914 203 aa12.69□□□□□ -0.38
ACTN4-207ENST00000495553 SMG6Q86US8 1419 aaKnown RBP12.69□□□□□ -0.38
ACTN4-207ENST00000495553 GLI3P10071 1580 aa12.69□□□□□ -0.38
ACTN4-207ENST00000495553 NRAPQ86VF7 1730 aa12.68□□□□□ -0.38
ACTN4-207ENST00000495553 WDR43Q15061 677 aaKnown RBP eCLIP12.68□□□□□ -0.38
ACTN4-207ENST00000495553 KRT27Q7Z3Y8 459 aa12.68□□□□□ -0.38
ACTN4-207ENST00000495553 CDCA7Q9BWT1 371 aaPredicted RBP12.68□□□□□ -0.38
ACTN4-207ENST00000495553 NUDCQ9Y266 331 aa12.68□□□□□ -0.38
ACTN4-207ENST00000495553 INSRP06213 1382 aa12.68□□□□□ -0.38
ACTN4-207ENST00000495553 PDE3BQ13370 1112 aa12.67□□□□□ -0.38
ACTN4-207ENST00000495553 COL18A1P39060 1754 aa12.66□□□□□ -0.38
ACTN4-207ENST00000495553 DDB1Q16531 1140 aa12.65□□□□□ -0.38
ACTN4-207ENST00000495553 DIAPH1O60610 1272 aaKnown RBP12.64□□□□□ -0.39
ACTN4-207ENST00000495553 IL2RBP14784 551 aa12.64□□□□□ -0.39
ACTN4-207ENST00000495553 NBPF6Q5VWK0 638 aa12.64□□□□□ -0.39
ACTN4-207ENST00000495553 NBPF4Q96M43 638 aa12.64□□□□□ -0.39
ACTN4-207ENST00000495553 MAP2P11137 1827 aaKnown RBP12.63□□□□□ -0.39
ACTN4-207ENST00000495553 EXOC5O00471 708 aa12.63□□□□□ -0.39
ACTN4-207ENST00000495553 USHBP1Q8N6Y0 703 aa12.63□□□□□ -0.39
ACTN4-207ENST00000495553 PNNQ9H307 717 aaKnown RBP12.63□□□□□ -0.39
ACTN4-207ENST00000495553 LTN1O94822 1766 aa12.62□□□□□ -0.39
ACTN4-207ENST00000495553 NEFMP07197 916 aa12.62□□□□□ -0.39
ACTN4-207ENST00000495553 EIF4A2Q14240 407 aaKnown RBP12.62□□□□□ -0.39
ACTN4-207ENST00000495553 RAPGEF4Q8WZA2 1011 aa12.62□□□□□ -0.39
ACTN4-207ENST00000495553 EP400Q96L91 3159 aa12.62□□□□□ -0.39
ACTN4-207ENST00000495553 FAM182BQ5T319 152 aa12.61□□□□□ -0.39
ACTN4-207ENST00000495553 FAM9BQ8IZU0 186 aa12.61□□□□□ -0.39
ACTN4-207ENST00000495553 UPF1Q92900 1129 aaKnown RBP eCLIP12.61□□□□□ -0.39
ACTN4-207ENST00000495553 U2SURPO15042 1029 aaKnown RBP12.6□□□□□ -0.39
ACTN4-207ENST00000495553 TATP17735 454 aaPredicted RBP12.6□□□□□ -0.39
ACTN4-207ENST00000495553 FAM196AQ6ZSG2 479 aa12.6□□□□□ -0.39
ACTN4-207ENST00000495553 EYA1Q99502 592 aa12.6□□□□□ -0.39
ACTN4-207ENST00000495553 U2AF1L5P0DN76 240 aaPredicted RBP12.59□□□□□ -0.39
ACTN4-207ENST00000495553 U2AF1Q01081 240 aaKnown RBP eCLIP12.59□□□□□ -0.39
ACTN4-207ENST00000495553 SF3B2Q13435 895 aaKnown RBP12.59□□□□□ -0.39
ACTN4-207ENST00000495553 PNISRQ8TF01 805 aaKnown RBP12.59□□□□□ -0.39
ACTN4-207ENST00000495553 DISP2A7MBM2 1401 aa12.59□□□□□ -0.39
ACTN4-207ENST00000495553 PEAK1Q9H792 1746 aa12.59□□□□□ -0.39
ACTN4-207ENST00000495553 THSD7AQ9UPZ6 1657 aa12.58□□□□□ -0.4
ACTN4-207ENST00000495553 CCDC125Q86Z20 511 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms