RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 STRN4Q9NRL3 753 aa32.14■■■□□ 2.74
CPNE9-204ENST00000491802 LTN1O94822 1766 aa32.14■■■□□ 2.74
CPNE9-204ENST00000491802 RGPD5Q99666 1765 aa32.12■■■□□ 2.73
CPNE9-204ENST00000491802 FYB1O15117 783 aa32.11■■■□□ 2.73
CPNE9-204ENST00000491802 SEPT12Q8IYM1 358 aa32.11■■■□□ 2.73
CPNE9-204ENST00000491802 GGNBP2Q9H3C7 697 aa32.11■■■□□ 2.73
CPNE9-204ENST00000491802 EVA1CP58658 441 aa32.1■■■□□ 2.73
CPNE9-204ENST00000491802 UPF1Q92900 1129 aaKnown RBP eCLIP32.1■■■□□ 2.73
CPNE9-204ENST00000491802 PANK3Q9H999 370 aa32.08■■■□□ 2.73
CPNE9-204ENST00000491802 CRB1P82279 1406 aa32.08■■■□□ 2.73
CPNE9-204ENST00000491802 LARP1Q6PKG0 1096 aaKnown RBP32.07■■■□□ 2.72
CPNE9-204ENST00000491802 BARGINQ6ZT62 677 aa32.07■■■□□ 2.72
CPNE9-204ENST00000491802 FAM98CQ17RN3 349 aaKnown RBP32.06■■■□□ 2.72
CPNE9-204ENST00000491802 AXIN2Q9Y2T1 843 aa32.06■■■□□ 2.72
CPNE9-204ENST00000491802 THRAP3Q9Y2W1 955 aaKnown RBP32.06■■■□□ 2.72
CPNE9-204ENST00000491802 CCDC7Q96M83 1385 aa32.06■■■□□ 2.72
CPNE9-204ENST00000491802 CGNL1Q0VF96 1302 aa32.05■■■□□ 2.72
CPNE9-204ENST00000491802 EP400Q96L91 3159 aa32.04■■■□□ 2.72
CPNE9-204ENST00000491802 WDR17Q8IZU2 1322 aa32.03■■■□□ 2.72
CPNE9-204ENST00000491802 WASHC2AQ641Q2 1341 aa32.01■■■□□ 2.72
CPNE9-204ENST00000491802 TCP11L2Q8N4U5 519 aa32.01■■■□□ 2.71
CPNE9-204ENST00000491802 WNK3Q9BYP7 1800 aa32■■■□□ 2.71
CPNE9-204ENST00000491802 PARP4Q9UKK3 1724 aaKnown RBP32■■■□□ 2.71
CPNE9-204ENST00000491802 KRT27Q7Z3Y8 459 aa31.99■■■□□ 2.71
CPNE9-204ENST00000491802 BLMP54132 1417 aaPredicted RBP31.99■■■□□ 2.71
CPNE9-204ENST00000491802 USP35Q9P2H5 1018 aa31.98■■■□□ 2.71
CPNE9-204ENST00000491802 A0A0G2JS52 829 aa31.97■■■□□ 2.71
CPNE9-204ENST00000491802 FBLN1P23142 703 aa31.97■■■□□ 2.71
CPNE9-204ENST00000491802 MYT1Q01538 1121 aa31.97■■■□□ 2.71
CPNE9-204ENST00000491802 MAP3K19Q56UN5 1328 aa31.97■■■□□ 2.71
CPNE9-204ENST00000491802 ANKRD26Q9UPS8 1709 aa31.96■■■□□ 2.71
CPNE9-204ENST00000491802 CCDC125Q86Z20 511 aa31.95■■■□□ 2.71
CPNE9-204ENST00000491802 FAM208AQ9UK61 1670 aaKnown RBP31.95■■■□□ 2.7
CPNE9-204ENST00000491802 ERBB3P21860 1342 aa31.95■■■□□ 2.7
CPNE9-204ENST00000491802 RTL1A6NKG5 1358 aa31.94■■■□□ 2.7
CPNE9-204ENST00000491802 CSB-PGBD3P0DP91 1061 aa31.93■■■□□ 2.7
CPNE9-204ENST00000491802 TOM1L2Q6ZVM7 507 aa31.93■■■□□ 2.7
CPNE9-204ENST00000491802 IP6K1Q92551 441 aa31.93■■■□□ 2.7
CPNE9-204ENST00000491802 CARD10Q9BWT7 1032 aa31.93■■■□□ 2.7
CPNE9-204ENST00000491802 ZEB1P37275 1124 aaPredicted RBP31.92■■■□□ 2.7
CPNE9-204ENST00000491802 RRS1Q15050 365 aaKnown RBP31.92■■■□□ 2.7
CPNE9-204ENST00000491802 NSD2O96028 1365 aa31.92■■■□□ 2.7
CPNE9-204ENST00000491802 AMPHP49418 695 aa31.9■■■□□ 2.7
CPNE9-204ENST00000491802 KNSTRNQ9Y448 316 aa31.9■■■□□ 2.7
CPNE9-204ENST00000491802 KIF24Q5T7B8 1368 aa31.9■■■□□ 2.7
CPNE9-204ENST00000491802 CDCA7Q9BWT1 371 aaPredicted RBP31.89■■■□□ 2.7
CPNE9-204ENST00000491802 HOXC9P31274 260 aa31.88■■■□□ 2.69
CPNE9-204ENST00000491802 ANKRD24Q8TF21 1146 aa31.88■■■□□ 2.69
CPNE9-204ENST00000491802 LRRC37A3O60309 1634 aa31.87■■■□□ 2.69
CPNE9-204ENST00000491802 PEAK1Q9H792 1746 aa31.86■■■□□ 2.69
CPNE9-204ENST00000491802 DISP2A7MBM2 1401 aa31.86■■■□□ 2.69
CPNE9-204ENST00000491802 FLT4P35916 1363 aa31.82■■■□□ 2.69
CPNE9-204ENST00000491802 AMER1Q5JTC6 1135 aaPredicted RBP31.82■■■□□ 2.68
CPNE9-204ENST00000491802 LTV1Q96GA3 475 aaPredicted RBP31.82■■■□□ 2.68
CPNE9-204ENST00000491802 EMILIN1Q9Y6C2 1016 aa31.82■■■□□ 2.68
CPNE9-204ENST00000491802 RGPD1P0DJD0 1748 aa31.81■■■□□ 2.68
CPNE9-204ENST00000491802 TNNT2P45379 298 aaPredicted RBP31.81■■■□□ 2.68
CPNE9-204ENST00000491802 NLRP2Q9NX02 1062 aa31.81■■■□□ 2.68
CPNE9-204ENST00000491802 MAP2P11137 1827 aaKnown RBP31.81■■■□□ 2.68
CPNE9-204ENST00000491802 PER1O15534 1290 aaPredicted RBP31.79■■■□□ 2.68
CPNE9-204ENST00000491802 PDE3BQ13370 1112 aa31.79■■■□□ 2.68
CPNE9-204ENST00000491802 FAM196AQ6ZSG2 479 aa31.78■■■□□ 2.68
CPNE9-204ENST00000491802 MORC1Q86VD1 984 aa31.78■■■□□ 2.68
CPNE9-204ENST00000491802 INSRP06213 1382 aa31.78■■■□□ 2.68
CPNE9-204ENST00000491802 SMG6Q86US8 1419 aaKnown RBP31.77■■■□□ 2.68
CPNE9-204ENST00000491802 PPM1GO15355 546 aaPredicted RBP31.76■■■□□ 2.67
CPNE9-204ENST00000491802 DDB1Q16531 1140 aa31.75■■■□□ 2.67
CPNE9-204ENST00000491802 HSP90AB2PQ58FF8 381 aa31.75■■■□□ 2.67
CPNE9-204ENST00000491802 TNS1Q9HBL0 1735 aaKnown RBP31.75■■■□□ 2.67
CPNE9-204ENST00000491802 RGPD2P0DJD1 1756 aa31.74■■■□□ 2.67
CPNE9-204ENST00000491802 POLKQ9UBT6 870 aa31.74■■■□□ 2.67
CPNE9-204ENST00000491802 BCL9O00512 1426 aa31.73■■■□□ 2.67
CPNE9-204ENST00000491802 OVOS2A0A0G2JMS6 1433 aa31.72■■■□□ 2.67
CPNE9-204ENST00000491802 TNS2Q63HR2 1409 aa31.72■■■□□ 2.67
CPNE9-204ENST00000491802 CC2D1BQ5T0F9 858 aaKnown RBP31.71■■■□□ 2.67
CPNE9-204ENST00000491802 FAM182BQ5T319 152 aa31.71■■■□□ 2.67
CPNE9-204ENST00000491802 SF3B2Q13435 895 aaKnown RBP31.7■■■□□ 2.67
CPNE9-204ENST00000491802 SBF2Q86WG5 1849 aa31.7■■■□□ 2.66
CPNE9-204ENST00000491802 NPC1L1Q9UHC9 1359 aa31.69■■■□□ 2.66
CPNE9-204ENST00000491802 IL2RBP14784 551 aa31.69■■■□□ 2.66
CPNE9-204ENST00000491802 EXOC5O00471 708 aa31.66■■■□□ 2.66
CPNE9-204ENST00000491802 CNGB1Q14028 1251 aaPredicted RBP31.66■■■□□ 2.66
CPNE9-204ENST00000491802 NBPF6Q5VWK0 638 aa31.64■■■□□ 2.66
CPNE9-204ENST00000491802 NBPF4Q96M43 638 aa31.64■■■□□ 2.66
CPNE9-204ENST00000491802 MARCH10Q8NA82 808 aaPredicted RBP31.63■■■□□ 2.65
CPNE9-204ENST00000491802 NCAPD2Q15021 1401 aa31.63■■■□□ 2.65
CPNE9-204ENST00000491802 BAG6P46379 1132 aa31.62■■■□□ 2.65
CPNE9-204ENST00000491802 USHBP1Q8N6Y0 703 aa31.62■■■□□ 2.65
CPNE9-204ENST00000491802 MEGF6O75095 1541 aa31.59■■■□□ 2.65
CPNE9-204ENST00000491802 TRIM37O94972 964 aa31.58■■■□□ 2.65
CPNE9-204ENST00000491802 DEFB132Q7Z7B7 95 aa31.58■■■□□ 2.65
CPNE9-204ENST00000491802 EIF4A2Q14240 407 aaKnown RBP31.57■■■□□ 2.64
CPNE9-204ENST00000491802 SHANK3Q9BYB0 1731 aa31.57■■■□□ 2.64
CPNE9-204ENST00000491802 RGPD3A6NKT7 1758 aaPredicted RBP31.56■■■□□ 2.64
CPNE9-204ENST00000491802 RGPD4Q7Z3J3 1758 aa31.56■■■□□ 2.64
CPNE9-204ENST00000491802 PARD3Q8TEW0 1356 aa31.56■■■□□ 2.64
CPNE9-204ENST00000491802 NHSQ6T4R5 1651 aa31.52■■■□□ 2.64
CPNE9-204ENST00000491802 RAPGEF4Q8WZA2 1011 aa31.52■■■□□ 2.64
CPNE9-204ENST00000491802 EYA1Q99502 592 aa31.52■■■□□ 2.64
CPNE9-204ENST00000491802 MTHFSP49914 203 aa31.51■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms