RNA–Protein interactions for RNA: ENST00000485120.1

PKD1-218, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 696 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-218ENST00000485120 USP21Q9UK80 565 aa27.57■■■□□ 2
PKD1-218ENST00000485120 AXIN2Q9Y2T1 843 aa27.57■■■□□ 2
PKD1-218ENST00000485120 AFF2P51816 1311 aa27.57■■■□□ 2
PKD1-218ENST00000485120 COL14A1Q05707 1796 aaKnown RBP27.56■■■□□ 2
PKD1-218ENST00000485120 ANP32CO43423 234 aa27.56■■■□□ 2
PKD1-218ENST00000485120 PPP2R1AP30153 589 aa27.56■■■□□ 2
PKD1-218ENST00000485120 EVA1CP58658 441 aa27.56■■■□□ 2
PKD1-218ENST00000485120 SMG6Q86US8 1419 aaKnown RBP27.56■■■□□ 2
PKD1-218ENST00000485120 MTHFSP49914 203 aa27.55■■■□□ 2
PKD1-218ENST00000485120 INSRP06213 1382 aa27.55■■■□□ 2
PKD1-218ENST00000485120 PPM1GO15355 546 aaPredicted RBP27.54■■■□□ 2
PKD1-218ENST00000485120 BCL9LQ86UU0 1499 aa27.53■■■□□ 2
PKD1-218ENST00000485120 PHF23Q9BUL5 403 aaPredicted RBP27.52■■■□□ 2
PKD1-218ENST00000485120 MYBBP1AQ9BQG0 1328 aaKnown RBP27.51■■□□□ 1.99
PKD1-218ENST00000485120 HSP90AB2PQ58FF8 381 aa27.51■■□□□ 1.99
PKD1-218ENST00000485120 TRPC5Q9UL62 973 aaPredicted RBP27.51■■□□□ 1.99
PKD1-218ENST00000485120 CAMTA1Q9Y6Y1 1673 aa27.51■■□□□ 1.99
PKD1-218ENST00000485120 VPS72Q15906 364 aa27.5■■□□□ 1.99
PKD1-218ENST00000485120 ERBB3P21860 1342 aa27.49■■□□□ 1.99
PKD1-218ENST00000485120 ANKRD24Q8TF21 1146 aa27.49■■□□□ 1.99
PKD1-218ENST00000485120 CFAP53Q96M91 514 aa27.49■■□□□ 1.99
PKD1-218ENST00000485120 LMO7Q8WWI1 1683 aa27.49■■□□□ 1.99
PKD1-218ENST00000485120 WDR17Q8IZU2 1322 aa27.48■■□□□ 1.99
PKD1-218ENST00000485120 COL5A2P05997 1499 aaPredicted RBP27.48■■□□□ 1.99
PKD1-218ENST00000485120 COL18A1P39060 1754 aa27.48■■□□□ 1.99
PKD1-218ENST00000485120 CDK12Q9NYV4 1490 aaPredicted RBP27.47■■□□□ 1.99
PKD1-218ENST00000485120 STRN4Q9NRL3 753 aa27.47■■□□□ 1.99
PKD1-218ENST00000485120 CSB-PGBD3P0DP91 1061 aa27.46■■□□□ 1.99
PKD1-218ENST00000485120 DIEXFQ68CQ4 756 aaKnown RBP27.46■■□□□ 1.99
PKD1-218ENST00000485120 QTRT2Q9H974 415 aaKnown RBP27.46■■□□□ 1.99
PKD1-218ENST00000485120 NWD2Q9ULI1 1742 aa27.45■■□□□ 1.99
PKD1-218ENST00000485120 LARP1Q6PKG0 1096 aaKnown RBP27.44■■□□□ 1.98
PKD1-218ENST00000485120 RGS17Q9UGC6 210 aaPredicted RBP27.44■■□□□ 1.98
PKD1-218ENST00000485120 TOM1L2Q6ZVM7 507 aa27.43■■□□□ 1.98
PKD1-218ENST00000485120 CARD10Q9BWT7 1032 aa27.43■■□□□ 1.98
PKD1-218ENST00000485120 ATRNO75882 1429 aa27.42■■□□□ 1.98
PKD1-218ENST00000485120 GJD4Q96KN9 370 aaPredicted RBP27.42■■□□□ 1.98
PKD1-218ENST00000485120 THRAP3Q9Y2W1 955 aaKnown RBP27.42■■□□□ 1.98
PKD1-218ENST00000485120 LTN1O94822 1766 aa27.42■■□□□ 1.98
PKD1-218ENST00000485120 SPATA31A5Q5VU36 1347 aa27.41■■□□□ 1.98
PKD1-218ENST00000485120 SPATA31A7Q8IWB4 1347 aa27.41■■□□□ 1.98
PKD1-218ENST00000485120 CRB1P82279 1406 aa27.41■■□□□ 1.98
PKD1-218ENST00000485120 DIAPH1O60610 1272 aaKnown RBP27.41■■□□□ 1.98
PKD1-218ENST00000485120 EIF4A2Q14240 407 aaKnown RBP27.41■■□□□ 1.98
PKD1-218ENST00000485120 LTV1Q96GA3 475 aaPredicted RBP27.41■■□□□ 1.98
PKD1-218ENST00000485120 MAP2P11137 1827 aaKnown RBP27.4■■□□□ 1.98
PKD1-218ENST00000485120 IL13P35225 146 aa27.4■■□□□ 1.98
PKD1-218ENST00000485120 SPATA31A1Q5TZJ5 1347 aa27.4■■□□□ 1.98
PKD1-218ENST00000485120 PLCH1Q4KWH8 1693 aa27.4■■□□□ 1.98
PKD1-218ENST00000485120 PEAK1Q9H792 1746 aa27.39■■□□□ 1.98
PKD1-218ENST00000485120 NLRP2Q9NX02 1062 aa27.39■■□□□ 1.98
PKD1-218ENST00000485120 CCDC9Q9Y3X0 531 aaKnown RBP27.39■■□□□ 1.98
PKD1-218ENST00000485120 RBM6P78332 1123 aaKnown RBP27.38■■□□□ 1.97
PKD1-218ENST00000485120 TCP11L2Q8N4U5 519 aa27.38■■□□□ 1.97
PKD1-218ENST00000485120 NUDCQ9Y266 331 aa27.38■■□□□ 1.97
PKD1-218ENST00000485120 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.37■■□□□ 1.97
PKD1-218ENST00000485120 BARGINQ6ZT62 677 aa27.36■■□□□ 1.97
PKD1-218ENST00000485120 RXRBP28702 533 aa27.35■■□□□ 1.97
PKD1-218ENST00000485120 NBPF6Q5VWK0 638 aa27.35■■□□□ 1.97
PKD1-218ENST00000485120 NBPF4Q96M43 638 aa27.35■■□□□ 1.97
PKD1-218ENST00000485120 CDCA7Q9BWT1 371 aaPredicted RBP27.35■■□□□ 1.97
PKD1-218ENST00000485120 NRAPQ86VF7 1730 aa27.35■■□□□ 1.97
PKD1-218ENST00000485120 ONECUT3O60422 494 aaPredicted RBP27.34■■□□□ 1.97
PKD1-218ENST00000485120 EYA1Q99502 592 aa27.34■■□□□ 1.97
PKD1-218ENST00000485120 POTEAQ6S8J7 498 aa27.33■■□□□ 1.97
PKD1-218ENST00000485120 IGSF1Q8N6C5 1336 aa27.32■■□□□ 1.96
PKD1-218ENST00000485120 COL3A1P02461 1466 aaPredicted RBP27.31■■□□□ 1.96
PKD1-218ENST00000485120 USP35Q9P2H5 1018 aa27.3■■□□□ 1.96
PKD1-218ENST00000485120 NCAPD2Q15021 1401 aa27.28■■□□□ 1.96
PKD1-218ENST00000485120 PLEKHG2Q9H7P9 1386 aa27.26■■□□□ 1.95
PKD1-218ENST00000485120 IL2RBP14784 551 aa27.26■■□□□ 1.95
PKD1-218ENST00000485120 FAM208AQ9UK61 1670 aaKnown RBP27.26■■□□□ 1.95
PKD1-218ENST00000485120 RGPD5Q99666 1765 aa27.25■■□□□ 1.95
PKD1-218ENST00000485120 CCER2I3L3R5 266 aa27.25■■□□□ 1.95
PKD1-218ENST00000485120 U2SURPO15042 1029 aaKnown RBP27.25■■□□□ 1.95
PKD1-218ENST00000485120 FAM98CQ17RN3 349 aaKnown RBP27.25■■□□□ 1.95
PKD1-218ENST00000485120 RAPGEF4Q8WZA2 1011 aa27.25■■□□□ 1.95
PKD1-218ENST00000485120 KDRP35968 1356 aa27.24■■□□□ 1.95
PKD1-218ENST00000485120 SULT6B1Q6IMI4 303 aa27.24■■□□□ 1.95
PKD1-218ENST00000485120 FCHSD2O94868 740 aa27.22■■□□□ 1.95
PKD1-218ENST00000485120 U2AF1L5P0DN76 240 aaPredicted RBP27.22■■□□□ 1.95
PKD1-218ENST00000485120 TATP17735 454 aaPredicted RBP27.22■■□□□ 1.95
PKD1-218ENST00000485120 U2AF1Q01081 240 aaKnown RBP eCLIP27.22■■□□□ 1.95
PKD1-218ENST00000485120 USHBP1Q8N6Y0 703 aa27.22■■□□□ 1.95
PKD1-218ENST00000485120 PNNQ9H307 717 aaKnown RBP27.22■■□□□ 1.95
PKD1-218ENST00000485120 MRS2Q9HD23 443 aa27.21■■□□□ 1.95
PKD1-218ENST00000485120 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.21■■□□□ 1.95
PKD1-218ENST00000485120 GLI3P10071 1580 aa27.21■■□□□ 1.95
PKD1-218ENST00000485120 DISP2A7MBM2 1401 aa27.2■■□□□ 1.94
PKD1-218ENST00000485120 WDR43Q15061 677 aaKnown RBP eCLIP27.19■■□□□ 1.94
PKD1-218ENST00000485120 SEPT12Q8IYM1 358 aa27.19■■□□□ 1.94
PKD1-218ENST00000485120 EXOC5O00471 708 aa27.18■■□□□ 1.94
PKD1-218ENST00000485120 HMOX1P09601 288 aa27.16■■□□□ 1.94
PKD1-218ENST00000485120 DDB1Q16531 1140 aa27.16■■□□□ 1.94
PKD1-218ENST00000485120 AMOTQ4VCS5 1084 aa27.16■■□□□ 1.94
PKD1-218ENST00000485120 CCDC184Q52MB2 194 aa27.16■■□□□ 1.94
PKD1-218ENST00000485120 AEBP1Q8IUX7 1158 aa27.16■■□□□ 1.94
PKD1-218ENST00000485120 MIER1Q8N108 512 aa27.16■■□□□ 1.94
PKD1-218ENST00000485120 PNISRQ8TF01 805 aaKnown RBP27.15■■□□□ 1.94
PKD1-218ENST00000485120 RGPD1P0DJD0 1748 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms