RNA–Protein interactions for RNA: ENST00000479261.1

DEPDC5-217, Transcript of DEP domain containing 5, humanhuman

TSL 2

Gene DEPDC5, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-217ENST00000479261 COG3Q96JB2 828 aa17.1■□□□□ 0.33
DEPDC5-217ENST00000479261 SOX12O15370 315 aa17.09■□□□□ 0.33
DEPDC5-217ENST00000479261 BARGINQ6ZT62 677 aa17.09■□□□□ 0.33
DEPDC5-217ENST00000479261 STRN4Q9NRL3 753 aa17.09■□□□□ 0.33
DEPDC5-217ENST00000479261 MAP3K19Q56UN5 1328 aa17.09■□□□□ 0.33
DEPDC5-217ENST00000479261 CCDC7Q96M83 1385 aa17.09■□□□□ 0.33
DEPDC5-217ENST00000479261 ABCC6O95255 1503 aa17.08■□□□□ 0.32
DEPDC5-217ENST00000479261 SEPT12Q8IYM1 358 aa17.08■□□□□ 0.32
DEPDC5-217ENST00000479261 IP6K1Q92551 441 aa17.08■□□□□ 0.32
DEPDC5-217ENST00000479261 EVA1CP58658 441 aa17.07■□□□□ 0.32
DEPDC5-217ENST00000479261 AMER1Q5JTC6 1135 aaPredicted RBP17.07■□□□□ 0.32
DEPDC5-217ENST00000479261 BRWD3Q6RI45 1802 aa17.07■□□□□ 0.32
DEPDC5-217ENST00000479261 WDR17Q8IZU2 1322 aa17.06■□□□□ 0.32
DEPDC5-217ENST00000479261 FAM98CQ17RN3 349 aaKnown RBP17.06■□□□□ 0.32
DEPDC5-217ENST00000479261 POLR3GLQ9BT43 218 aa17.06■□□□□ 0.32
DEPDC5-217ENST00000479261 LTN1O94822 1766 aa17.05■□□□□ 0.32
DEPDC5-217ENST00000479261 THSD7AQ9UPZ6 1657 aa17.05■□□□□ 0.32
DEPDC5-217ENST00000479261 UPF1Q92900 1129 aaKnown RBP eCLIP17.05■□□□□ 0.32
DEPDC5-217ENST00000479261 THRAP3Q9Y2W1 955 aaKnown RBP17.05■□□□□ 0.32
DEPDC5-217ENST00000479261 KIF20BQ96Q89 1820 aa17.05■□□□□ 0.32
DEPDC5-217ENST00000479261 CRB1P82279 1406 aa17.04■□□□□ 0.32
DEPDC5-217ENST00000479261 CGNL1Q0VF96 1302 aa17.04■□□□□ 0.32
DEPDC5-217ENST00000479261 HOXC9P31274 260 aa17.04■□□□□ 0.32
DEPDC5-217ENST00000479261 RRS1Q15050 365 aaKnown RBP17.04■□□□□ 0.32
DEPDC5-217ENST00000479261 ERBB3P21860 1342 aa17.03■□□□□ 0.32
DEPDC5-217ENST00000479261 TCP11L2Q8N4U5 519 aa17.03■□□□□ 0.32
DEPDC5-217ENST00000479261 CARD10Q9BWT7 1032 aa17.03■□□□□ 0.32
DEPDC5-217ENST00000479261 CCDC9Q9Y3X0 531 aaKnown RBP17.03■□□□□ 0.32
DEPDC5-217ENST00000479261 EP400Q96L91 3159 aa17.03■□□□□ 0.32
DEPDC5-217ENST00000479261 POLKQ9UBT6 870 aa17.02■□□□□ 0.32
DEPDC5-217ENST00000479261 ZBTB7CA1YPR0 619 aa17.01■□□□□ 0.31
DEPDC5-217ENST00000479261 BLMP54132 1417 aaPredicted RBP17.01■□□□□ 0.31
DEPDC5-217ENST00000479261 PEAK1Q9H792 1746 aa17.01■□□□□ 0.31
DEPDC5-217ENST00000479261 ANKRD24Q8TF21 1146 aa17■□□□□ 0.31
DEPDC5-217ENST00000479261 USP35Q9P2H5 1018 aa17■□□□□ 0.31
DEPDC5-217ENST00000479261 DISP2A7MBM2 1401 aa16.99■□□□□ 0.31
DEPDC5-217ENST00000479261 MAP2P11137 1827 aaKnown RBP16.99■□□□□ 0.31
DEPDC5-217ENST00000479261 HSP90AB2PQ58FF8 381 aa16.99■□□□□ 0.31
DEPDC5-217ENST00000479261 TOM1L2Q6ZVM7 507 aa16.99■□□□□ 0.31
DEPDC5-217ENST00000479261 KRT27Q7Z3Y8 459 aa16.99■□□□□ 0.31
DEPDC5-217ENST00000479261 EMILIN1Q9Y6C2 1016 aa16.99■□□□□ 0.31
DEPDC5-217ENST00000479261 KIF24Q5T7B8 1368 aa16.99■□□□□ 0.31
DEPDC5-217ENST00000479261 ANKRD26Q9UPS8 1709 aa16.98■□□□□ 0.31
DEPDC5-217ENST00000479261 KNSTRNQ9Y448 316 aa16.97■□□□□ 0.31
DEPDC5-217ENST00000479261 RTL1A6NKG5 1358 aa16.97■□□□□ 0.31
DEPDC5-217ENST00000479261 NSD2O96028 1365 aa16.97■□□□□ 0.31
DEPDC5-217ENST00000479261 INSRP06213 1382 aa16.97■□□□□ 0.31
DEPDC5-217ENST00000479261 NPC1L1Q9UHC9 1359 aa16.97■□□□□ 0.31
DEPDC5-217ENST00000479261 AMPHP49418 695 aa16.96■□□□□ 0.31
DEPDC5-217ENST00000479261 NBPF6Q5VWK0 638 aa16.95■□□□□ 0.3
DEPDC5-217ENST00000479261 NBPF4Q96M43 638 aa16.95■□□□□ 0.3
DEPDC5-217ENST00000479261 PARP4Q9UKK3 1724 aaKnown RBP16.95■□□□□ 0.3
DEPDC5-217ENST00000479261 FAM182BQ5T319 152 aa16.94■□□□□ 0.3
DEPDC5-217ENST00000479261 RGPD2P0DJD1 1756 aa16.94■□□□□ 0.3
DEPDC5-217ENST00000479261 ZEB1P37275 1124 aaPredicted RBP16.93■□□□□ 0.3
DEPDC5-217ENST00000479261 SMG6Q86US8 1419 aaKnown RBP16.93■□□□□ 0.3
DEPDC5-217ENST00000479261 FLT4P35916 1363 aa16.92■□□□□ 0.3
DEPDC5-217ENST00000479261 FAM208AQ9UK61 1670 aaKnown RBP16.92■□□□□ 0.3
DEPDC5-217ENST00000479261 CSB-PGBD3P0DP91 1061 aa16.92■□□□□ 0.3
DEPDC5-217ENST00000479261 CDCA7Q9BWT1 371 aaPredicted RBP16.92■□□□□ 0.3
DEPDC5-217ENST00000479261 NLRP2Q9NX02 1062 aa16.92■□□□□ 0.3
DEPDC5-217ENST00000479261 NCAPD2Q15021 1401 aa16.92■□□□□ 0.3
DEPDC5-217ENST00000479261 WNK3Q9BYP7 1800 aa16.91■□□□□ 0.3
DEPDC5-217ENST00000479261 CCDC125Q86Z20 511 aa16.91■□□□□ 0.3
DEPDC5-217ENST00000479261 MARCH10Q8NA82 808 aaPredicted RBP16.91■□□□□ 0.3
DEPDC5-217ENST00000479261 LTV1Q96GA3 475 aaPredicted RBP16.91■□□□□ 0.3
DEPDC5-217ENST00000479261 TNNT2P45379 298 aaPredicted RBP16.9■□□□□ 0.3
DEPDC5-217ENST00000479261 MORC1Q86VD1 984 aa16.9■□□□□ 0.3
DEPDC5-217ENST00000479261 LRRC37A3O60309 1634 aa16.88■□□□□ 0.29
DEPDC5-217ENST00000479261 BCL9O00512 1426 aa16.88■□□□□ 0.29
DEPDC5-217ENST00000479261 IL2RBP14784 551 aa16.88■□□□□ 0.29
DEPDC5-217ENST00000479261 DDB1Q16531 1140 aa16.88■□□□□ 0.29
DEPDC5-217ENST00000479261 EYA1Q99502 592 aa16.88■□□□□ 0.29
DEPDC5-217ENST00000479261 EXOC5O00471 708 aa16.87■□□□□ 0.29
DEPDC5-217ENST00000479261 EIF4A2Q14240 407 aaKnown RBP16.87■□□□□ 0.29
DEPDC5-217ENST00000479261 CC2D1BQ5T0F9 858 aaKnown RBP16.87■□□□□ 0.29
DEPDC5-217ENST00000479261 FAM196AQ6ZSG2 479 aa16.87■□□□□ 0.29
DEPDC5-217ENST00000479261 A0A0G2JS52 829 aa16.86■□□□□ 0.29
DEPDC5-217ENST00000479261 MYT1Q01538 1121 aa16.86■□□□□ 0.29
DEPDC5-217ENST00000479261 PDE3BQ13370 1112 aa16.86■□□□□ 0.29
DEPDC5-217ENST00000479261 PPM1GO15355 546 aaPredicted RBP16.85■□□□□ 0.29
DEPDC5-217ENST00000479261 MTHFSP49914 203 aa16.85■□□□□ 0.29
DEPDC5-217ENST00000479261 IL13P35225 146 aa16.84■□□□□ 0.29
DEPDC5-217ENST00000479261 PTF1AQ7RTS3 328 aa16.84■□□□□ 0.29
DEPDC5-217ENST00000479261 USHBP1Q8N6Y0 703 aa16.84■□□□□ 0.29
DEPDC5-217ENST00000479261 MEGF6O75095 1541 aa16.84■□□□□ 0.29
DEPDC5-217ENST00000479261 SBF2Q86WG5 1849 aa16.83■□□□□ 0.28
DEPDC5-217ENST00000479261 TNS2Q63HR2 1409 aa16.82■□□□□ 0.28
DEPDC5-217ENST00000479261 IGSF1Q8N6C5 1336 aa16.82■□□□□ 0.28
DEPDC5-217ENST00000479261 OVOS2A0A0G2JMS6 1433 aa16.81■□□□□ 0.28
DEPDC5-217ENST00000479261 TRIM37O94972 964 aa16.81■□□□□ 0.28
DEPDC5-217ENST00000479261 DEFB132Q7Z7B7 95 aa16.81■□□□□ 0.28
DEPDC5-217ENST00000479261 SHANK3Q9BYB0 1731 aa16.81■□□□□ 0.28
DEPDC5-217ENST00000479261 RGPD1P0DJD0 1748 aa16.79■□□□□ 0.28
DEPDC5-217ENST00000479261 DDX10Q13206 875 aaKnown RBP16.79■□□□□ 0.28
DEPDC5-217ENST00000479261 ZCRB1Q8TBF4 217 aaKnown RBP16.79■□□□□ 0.28
DEPDC5-217ENST00000479261 CAMKK2Q96RR4 588 aa16.79■□□□□ 0.28
DEPDC5-217ENST00000479261 TNS1Q9HBL0 1735 aaKnown RBP16.79■□□□□ 0.28
DEPDC5-217ENST00000479261 COL3A1P02461 1466 aaPredicted RBP16.78■□□□□ 0.28
DEPDC5-217ENST00000479261 CYP27B1O15528 508 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms