RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 MARCH10Q8NA82 808 aaPredicted RBP18.58■□□□□ 0.56
HDAC8-217ENST00000478743 POGKQ9P215 609 aa18.58■□□□□ 0.56
HDAC8-217ENST00000478743 YBX3P16989 372 aaKnown RBP eCLIP18.56■□□□□ 0.56
HDAC8-217ENST00000478743 NHSQ6T4R5 1651 aa18.56■□□□□ 0.56
HDAC8-217ENST00000478743 ZNF827Q17R98 1081 aa18.55■□□□□ 0.56
HDAC8-217ENST00000478743 AATKQ6ZMQ8 1374 aa18.55■□□□□ 0.56
HDAC8-217ENST00000478743 DDB1Q16531 1140 aa18.54■□□□□ 0.56
HDAC8-217ENST00000478743 BCL9O00512 1426 aa18.54■□□□□ 0.56
HDAC8-217ENST00000478743 EIF3AQ14152 1382 aaKnown RBP18.54■□□□□ 0.56
HDAC8-217ENST00000478743 USP19O94966 1318 aa18.53■□□□□ 0.56
HDAC8-217ENST00000478743 COL18A1P39060 1754 aa18.53■□□□□ 0.56
HDAC8-217ENST00000478743 C11orf95C9JLR9 678 aaPredicted RBP18.53■□□□□ 0.56
HDAC8-217ENST00000478743 WASLO00401 505 aaPredicted RBP18.53■□□□□ 0.56
HDAC8-217ENST00000478743 CAPN15O75808 1086 aa18.53■□□□□ 0.56
HDAC8-217ENST00000478743 QSER1Q2KHR3 1735 aa18.52■□□□□ 0.56
HDAC8-217ENST00000478743 TRAK1Q9UPV9 953 aa18.51■□□□□ 0.55
HDAC8-217ENST00000478743 ARHGEF28Q8N1W1 1705 aaKnown RBP18.51■□□□□ 0.55
HDAC8-217ENST00000478743 BTAF1O14981 1849 aa18.51■□□□□ 0.55
HDAC8-217ENST00000478743 RGPD5Q99666 1765 aa18.5■□□□□ 0.55
HDAC8-217ENST00000478743 ZNF526Q8TF50 670 aaPredicted RBP18.5■□□□□ 0.55
HDAC8-217ENST00000478743 ADCY9O60503 1353 aa18.5■□□□□ 0.55
HDAC8-217ENST00000478743 PPARGC1BQ86YN6 1023 aaKnown RBP18.49■□□□□ 0.55
HDAC8-217ENST00000478743 POLR3AO14802 1390 aaPredicted RBP18.47■□□□□ 0.55
HDAC8-217ENST00000478743 ZBTB7CA1YPR0 619 aa18.47■□□□□ 0.55
HDAC8-217ENST00000478743 COL13A1Q5TAT6 717 aaPredicted RBP18.46■□□□□ 0.55
HDAC8-217ENST00000478743 NUDT16Q96DE0 195 aaKnown RBP18.46■□□□□ 0.55
HDAC8-217ENST00000478743 GPBP1L1Q9HC44 474 aaPredicted RBP18.46■□□□□ 0.55
HDAC8-217ENST00000478743 ACEP12821 1306 aa18.46■□□□□ 0.55
HDAC8-217ENST00000478743 GCP02774 474 aa18.45■□□□□ 0.54
HDAC8-217ENST00000478743 LRRC4BQ9NT99 713 aa18.44■□□□□ 0.54
HDAC8-217ENST00000478743 SLIT3O75094 1523 aa18.44■□□□□ 0.54
HDAC8-217ENST00000478743 TOM1L2Q6ZVM7 507 aa18.43■□□□□ 0.54
HDAC8-217ENST00000478743 ABTB2Q8N961 1025 aa18.43■□□□□ 0.54
HDAC8-217ENST00000478743 ACSBG1Q96GR2 724 aa18.42■□□□□ 0.54
HDAC8-217ENST00000478743 DNAJC5GQ8N7S2 189 aa18.41■□□□□ 0.54
HDAC8-217ENST00000478743 PNPLA7Q6ZV29 1317 aa18.41■□□□□ 0.54
HDAC8-217ENST00000478743 AXIN2Q9Y2T1 843 aa18.4■□□□□ 0.54
HDAC8-217ENST00000478743 WDR90Q96KV7 1748 aa18.4■□□□□ 0.54
HDAC8-217ENST00000478743 TNS2Q63HR2 1409 aa18.4■□□□□ 0.54
HDAC8-217ENST00000478743 TRPM1Q7Z4N2 1603 aa18.39■□□□□ 0.53
HDAC8-217ENST00000478743 KIF3CO14782 793 aa18.39■□□□□ 0.53
HDAC8-217ENST00000478743 AKT1S1Q96B36 256 aa18.39■□□□□ 0.53
HDAC8-217ENST00000478743 PIK3C2AO00443 1686 aa18.38■□□□□ 0.53
HDAC8-217ENST00000478743 GRIN3BO60391 1043 aa18.38■□□□□ 0.53
HDAC8-217ENST00000478743 WDR17Q8IZU2 1322 aa18.38■□□□□ 0.53
HDAC8-217ENST00000478743 ABCC6O95255 1503 aa18.38■□□□□ 0.53
HDAC8-217ENST00000478743 POLD1P28340 1107 aa18.37■□□□□ 0.53
HDAC8-217ENST00000478743 BRD4O60885 1362 aaPredicted RBP18.35■□□□□ 0.53
HDAC8-217ENST00000478743 USP6P35125 1406 aa18.34■□□□□ 0.53
HDAC8-217ENST00000478743 CPSF1Q10570 1443 aaKnown RBP18.34■□□□□ 0.53
HDAC8-217ENST00000478743 KCNQ4P56696 695 aa18.34■□□□□ 0.53
HDAC8-217ENST00000478743 NLRP13Q86W25 1043 aa18.34■□□□□ 0.53
HDAC8-217ENST00000478743 CDK19Q9BWU1 502 aa18.34■□□□□ 0.53
HDAC8-217ENST00000478743 PRELPP51888 382 aa18.33■□□□□ 0.52
HDAC8-217ENST00000478743 PLEKHG3A1L390 1219 aa18.32■□□□□ 0.52
HDAC8-217ENST00000478743 APLP1P51693 650 aa18.32■□□□□ 0.52
HDAC8-217ENST00000478743 HTRA3P83110 453 aa18.32■□□□□ 0.52
HDAC8-217ENST00000478743 SLC16A10Q8TF71 515 aa18.32■□□□□ 0.52
HDAC8-217ENST00000478743 MPHOSPH9Q99550 1183 aa18.32■□□□□ 0.52
HDAC8-217ENST00000478743 SLC34A2O95436 690 aa18.3■□□□□ 0.52
HDAC8-217ENST00000478743 TNS4Q8IZW8 715 aa18.3■□□□□ 0.52
HDAC8-217ENST00000478743 CDCA7Q9BWT1 371 aaPredicted RBP18.3■□□□□ 0.52
HDAC8-217ENST00000478743 WWC3Q9ULE0 1092 aa18.3■□□□□ 0.52
HDAC8-217ENST00000478743 PPIP5K1Q6PFW1 1433 aa18.3■□□□□ 0.52
HDAC8-217ENST00000478743 LY75O60449 1722 aa18.29■□□□□ 0.52
HDAC8-217ENST00000478743 EXOC5O00471 708 aa18.29■□□□□ 0.52
HDAC8-217ENST00000478743 CARD10Q9BWT7 1032 aa18.29■□□□□ 0.52
HDAC8-217ENST00000478743 KAT6BQ8WYB5 2073 aa18.28■□□□□ 0.52
HDAC8-217ENST00000478743 MSL1Q68DK7 614 aa18.28■□□□□ 0.52
HDAC8-217ENST00000478743 CCDC61Q9Y6R9 512 aa18.28■□□□□ 0.52
HDAC8-217ENST00000478743 DOT1LQ8TEK3 1739 aa18.26■□□□□ 0.51
HDAC8-217ENST00000478743 QRICH2Q9H0J4 1663 aa18.25■□□□□ 0.51
HDAC8-217ENST00000478743 NFAT5O94916 1531 aa18.25■□□□□ 0.51
HDAC8-217ENST00000478743 NLRP6P59044 892 aa18.25■□□□□ 0.51
HDAC8-217ENST00000478743 TFCP2L1Q9NZI6 479 aa18.25■□□□□ 0.51
HDAC8-217ENST00000478743 PCNTO95613 3336 aa18.25■□□□□ 0.51
HDAC8-217ENST00000478743 CSB-PGBD3P0DP91 1061 aa18.24■□□□□ 0.51
HDAC8-217ENST00000478743 CICQ96RK0 1608 aaPredicted RBP18.23■□□□□ 0.51
HDAC8-217ENST00000478743 CCDC7Q96M83 1385 aa18.22■□□□□ 0.51
HDAC8-217ENST00000478743 SOX12O15370 315 aa18.22■□□□□ 0.51
HDAC8-217ENST00000478743 ARHGEF25Q86VW2 580 aa18.22■□□□□ 0.51
HDAC8-217ENST00000478743 JMYQ8N9B5 988 aa18.22■□□□□ 0.51
HDAC8-217ENST00000478743 KDM2AQ9Y2K7 1162 aa18.22■□□□□ 0.51
HDAC8-217ENST00000478743 COL23A1Q86Y22 540 aaPredicted RBP18.21■□□□□ 0.51
HDAC8-217ENST00000478743 KLRG1Q96E93 195 aa18.21■□□□□ 0.51
HDAC8-217ENST00000478743 SLC27A3Q5K4L6 730 aa18.19■□□□□ 0.5
HDAC8-217ENST00000478743 USP54Q70EL1 1684 aa18.18■□□□□ 0.5
HDAC8-217ENST00000478743 NSD2O96028 1365 aa18.18■□□□□ 0.5
HDAC8-217ENST00000478743 TOGARAM1Q9Y4F4 1720 aa18.18■□□□□ 0.5
HDAC8-217ENST00000478743 MSH5O43196 834 aa18.17■□□□□ 0.5
HDAC8-217ENST00000478743 TOMM70O94826 608 aa18.17■□□□□ 0.5
HDAC8-217ENST00000478743 NMRK2Q9NPI5 230 aa18.17■□□□□ 0.5
HDAC8-217ENST00000478743 C5P01031 1676 aa18.17■□□□□ 0.5
HDAC8-217ENST00000478743 IGSF1Q8N6C5 1336 aa18.17■□□□□ 0.5
HDAC8-217ENST00000478743 CABP2Q9NPB3 220 aa18.16■□□□□ 0.5
HDAC8-217ENST00000478743 CD2APQ9Y5K6 639 aa18.16■□□□□ 0.5
HDAC8-217ENST00000478743 KIAA1551Q9HCM1 1747 aa18.15■□□□□ 0.5
HDAC8-217ENST00000478743 LTN1O94822 1766 aa18.15■□□□□ 0.5
HDAC8-217ENST00000478743 DCAF11Q8TEB1 546 aa18.14■□□□□ 0.49
HDAC8-217ENST00000478743 TAF1LQ8IZX4 1826 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms