RNA–Protein interactions for RNA: ENST00000478365.1

DDX39B-218, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-218ENST00000478365 SPATA31A1Q5TZJ5 1347 aa10.94□□□□□ -0.66
DDX39B-218ENST00000478365 C11orf95C9JLR9 678 aaPredicted RBP10.94□□□□□ -0.66
DDX39B-218ENST00000478365 BARGINQ6ZT62 677 aa10.94□□□□□ -0.66
DDX39B-218ENST00000478365 BLMP54132 1417 aaPredicted RBP10.93□□□□□ -0.66
DDX39B-218ENST00000478365 COL18A1P39060 1754 aa10.93□□□□□ -0.66
DDX39B-218ENST00000478365 RTL1A6NKG5 1358 aa10.93□□□□□ -0.66
DDX39B-218ENST00000478365 NSD2O96028 1365 aa10.93□□□□□ -0.66
DDX39B-218ENST00000478365 KIF24Q5T7B8 1368 aa10.93□□□□□ -0.66
DDX39B-218ENST00000478365 CCDC125Q86Z20 511 aa10.93□□□□□ -0.66
DDX39B-218ENST00000478365 TCP11L2Q8N4U5 519 aa10.93□□□□□ -0.66
DDX39B-218ENST00000478365 CDCA7Q9BWT1 371 aaPredicted RBP10.93□□□□□ -0.66
DDX39B-218ENST00000478365 STRN4Q9NRL3 753 aa10.93□□□□□ -0.66
DDX39B-218ENST00000478365 NSD3Q9BZ95 1437 aa10.92□□□□□ -0.66
DDX39B-218ENST00000478365 WDR17Q8IZU2 1322 aa10.92□□□□□ -0.66
DDX39B-218ENST00000478365 A0A0G2JS52 829 aa10.92□□□□□ -0.66
DDX39B-218ENST00000478365 SEPT12Q8IYM1 358 aa10.92□□□□□ -0.66
DDX39B-218ENST00000478365 LTN1O94822 1766 aa10.92□□□□□ -0.66
DDX39B-218ENST00000478365 FAM208AQ9UK61 1670 aaKnown RBP10.92□□□□□ -0.66
DDX39B-218ENST00000478365 THSD7AQ9UPZ6 1657 aa10.92□□□□□ -0.66
DDX39B-218ENST00000478365 CCDC7Q96M83 1385 aa10.91□□□□□ -0.66
DDX39B-218ENST00000478365 ZBTB7CA1YPR0 619 aa10.91□□□□□ -0.66
DDX39B-218ENST00000478365 FYB1O15117 783 aa10.91□□□□□ -0.66
DDX39B-218ENST00000478365 POLR3GLQ9BT43 218 aa10.91□□□□□ -0.66
DDX39B-218ENST00000478365 SOX12O15370 315 aa10.9□□□□□ -0.66
DDX39B-218ENST00000478365 CSB-PGBD3P0DP91 1061 aa10.9□□□□□ -0.66
DDX39B-218ENST00000478365 FAM98CQ17RN3 349 aaKnown RBP10.9□□□□□ -0.66
DDX39B-218ENST00000478365 KRT27Q7Z3Y8 459 aa10.9□□□□□ -0.66
DDX39B-218ENST00000478365 CARD10Q9BWT7 1032 aa10.9□□□□□ -0.66
DDX39B-218ENST00000478365 ANKRD26Q9UPS8 1709 aa10.89□□□□□ -0.67
DDX39B-218ENST00000478365 ERBB3P21860 1342 aa10.89□□□□□ -0.67
DDX39B-218ENST00000478365 BRWD3Q6RI45 1802 aa10.89□□□□□ -0.67
DDX39B-218ENST00000478365 LARP1Q6PKG0 1096 aaKnown RBP10.89□□□□□ -0.67
DDX39B-218ENST00000478365 TOM1L2Q6ZVM7 507 aa10.89□□□□□ -0.67
DDX39B-218ENST00000478365 IP6K1Q92551 441 aa10.89□□□□□ -0.67
DDX39B-218ENST00000478365 SMG6Q86US8 1419 aaKnown RBP10.89□□□□□ -0.67
DDX39B-218ENST00000478365 PARP4Q9UKK3 1724 aaKnown RBP10.89□□□□□ -0.67
DDX39B-218ENST00000478365 ZEB1P37275 1124 aaPredicted RBP10.88□□□□□ -0.67
DDX39B-218ENST00000478365 AMPHP49418 695 aa10.88□□□□□ -0.67
DDX39B-218ENST00000478365 UPF1Q92900 1129 aaKnown RBP eCLIP10.88□□□□□ -0.67
DDX39B-218ENST00000478365 GGNBP2Q9H3C7 697 aa10.88□□□□□ -0.67
DDX39B-218ENST00000478365 ZRANB1Q9UGI0 708 aa10.88□□□□□ -0.67
DDX39B-218ENST00000478365 KNSTRNQ9Y448 316 aa10.88□□□□□ -0.67
DDX39B-218ENST00000478365 RGPD5Q99666 1765 aa10.88□□□□□ -0.67
DDX39B-218ENST00000478365 KIF7Q2M1P5 1343 aa10.87□□□□□ -0.67
DDX39B-218ENST00000478365 PDE3BQ13370 1112 aa10.87□□□□□ -0.67
DDX39B-218ENST00000478365 CARD14Q9BXL6 1004 aa10.87□□□□□ -0.67
DDX39B-218ENST00000478365 PANK3Q9H999 370 aa10.87□□□□□ -0.67
DDX39B-218ENST00000478365 FLT4P35916 1363 aa10.87□□□□□ -0.67
DDX39B-218ENST00000478365 MAP3K19Q56UN5 1328 aa10.86□□□□□ -0.67
DDX39B-218ENST00000478365 WNK3Q9BYP7 1800 aa10.86□□□□□ -0.67
DDX39B-218ENST00000478365 SF3B2Q13435 895 aaKnown RBP10.86□□□□□ -0.67
DDX39B-218ENST00000478365 PPP4R3CPQ6ZMV5 832 aa10.86□□□□□ -0.67
DDX39B-218ENST00000478365 USP35Q9P2H5 1018 aa10.86□□□□□ -0.67
DDX39B-218ENST00000478365 AXIN2Q9Y2T1 843 aa10.86□□□□□ -0.67
DDX39B-218ENST00000478365 EP400Q96L91 3159 aa10.86□□□□□ -0.67
DDX39B-218ENST00000478365 HOXC9P31274 260 aa10.85□□□□□ -0.67
DDX39B-218ENST00000478365 FAM196AQ6ZSG2 479 aa10.85□□□□□ -0.67
DDX39B-218ENST00000478365 ANKRD24Q8TF21 1146 aa10.85□□□□□ -0.67
DDX39B-218ENST00000478365 NLRP2Q9NX02 1062 aa10.84□□□□□ -0.67
DDX39B-218ENST00000478365 INSRP06213 1382 aa10.84□□□□□ -0.67
DDX39B-218ENST00000478365 NPC1L1Q9UHC9 1359 aa10.84□□□□□ -0.67
DDX39B-218ENST00000478365 RGPD1P0DJD0 1748 aa10.84□□□□□ -0.67
DDX39B-218ENST00000478365 DISP2A7MBM2 1401 aa10.84□□□□□ -0.67
DDX39B-218ENST00000478365 PLEKHG2Q9H7P9 1386 aa10.83□□□□□ -0.68
DDX39B-218ENST00000478365 DDB1Q16531 1140 aa10.83□□□□□ -0.68
DDX39B-218ENST00000478365 MAP2P11137 1827 aaKnown RBP10.83□□□□□ -0.68
DDX39B-218ENST00000478365 LRRC37A3O60309 1634 aa10.83□□□□□ -0.68
DDX39B-218ENST00000478365 OVOS2A0A0G2JMS6 1433 aa10.83□□□□□ -0.68
DDX39B-218ENST00000478365 BCL9O00512 1426 aa10.83□□□□□ -0.68
DDX39B-218ENST00000478365 TNS2Q63HR2 1409 aa10.83□□□□□ -0.68
DDX39B-218ENST00000478365 IL2RBP14784 551 aa10.82□□□□□ -0.68
DDX39B-218ENST00000478365 EXOC5O00471 708 aa10.81□□□□□ -0.68
DDX39B-218ENST00000478365 RRS1Q15050 365 aaKnown RBP10.81□□□□□ -0.68
DDX39B-218ENST00000478365 MORC1Q86VD1 984 aa10.81□□□□□ -0.68
DDX39B-218ENST00000478365 WASHC2AQ641Q2 1341 aa10.81□□□□□ -0.68
DDX39B-218ENST00000478365 PARD3Q8TEW0 1356 aa10.8□□□□□ -0.68
DDX39B-218ENST00000478365 BAG6P46379 1132 aa10.8□□□□□ -0.68
DDX39B-218ENST00000478365 AMER1Q5JTC6 1135 aaPredicted RBP10.79□□□□□ -0.68
DDX39B-218ENST00000478365 RAPGEF4Q8WZA2 1011 aa10.78□□□□□ -0.68
DDX39B-218ENST00000478365 LTV1Q96GA3 475 aaPredicted RBP10.78□□□□□ -0.68
DDX39B-218ENST00000478365 POLKQ9UBT6 870 aa10.78□□□□□ -0.68
DDX39B-218ENST00000478365 PEAK1Q9H792 1746 aa10.78□□□□□ -0.68
DDX39B-218ENST00000478365 PPM1GO15355 546 aaPredicted RBP10.77□□□□□ -0.69
DDX39B-218ENST00000478365 PER1O15534 1290 aaPredicted RBP10.77□□□□□ -0.69
DDX39B-218ENST00000478365 EMILIN1Q9Y6C2 1016 aa10.77□□□□□ -0.69
DDX39B-218ENST00000478365 NCAPD2Q15021 1401 aa10.76□□□□□ -0.69
DDX39B-218ENST00000478365 RGPD3A6NKT7 1758 aaPredicted RBP10.76□□□□□ -0.69
DDX39B-218ENST00000478365 RGPD4Q7Z3J3 1758 aa10.76□□□□□ -0.69
DDX39B-218ENST00000478365 TATP17735 454 aaPredicted RBP10.76□□□□□ -0.69
DDX39B-218ENST00000478365 HSP90AB2PQ58FF8 381 aa10.76□□□□□ -0.69
DDX39B-218ENST00000478365 TNS1Q9HBL0 1735 aaKnown RBP10.75□□□□□ -0.69
DDX39B-218ENST00000478365 KAT6BQ8WYB5 2073 aa10.75□□□□□ -0.69
DDX39B-218ENST00000478365 FBLN1P23142 703 aa10.75□□□□□ -0.69
DDX39B-218ENST00000478365 HMGB2P26583 209 aaKnown RBP10.75□□□□□ -0.69
DDX39B-218ENST00000478365 NBPF6Q5VWK0 638 aa10.75□□□□□ -0.69
DDX39B-218ENST00000478365 NBPF4Q96M43 638 aa10.75□□□□□ -0.69
DDX39B-218ENST00000478365 RGPD2P0DJD1 1756 aa10.75□□□□□ -0.69
DDX39B-218ENST00000478365 SBF2Q86WG5 1849 aa10.74□□□□□ -0.69
DDX39B-218ENST00000478365 TRIM37O94972 964 aa10.74□□□□□ -0.69
DDX39B-218ENST00000478365 TNNT2P45379 298 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms