RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 NSD3Q9BZ95 1437 aa17.06■□□□□ 0.32
CLCNKA-205ENST00000477360 SEPT12Q8IYM1 358 aa17.06■□□□□ 0.32
CLCNKA-205ENST00000477360 ZRANB1Q9UGI0 708 aa17.06■□□□□ 0.32
CLCNKA-205ENST00000477360 RTL1A6NKG5 1358 aa17.05■□□□□ 0.32
CLCNKA-205ENST00000477360 NSD2O96028 1365 aa17.05■□□□□ 0.32
CLCNKA-205ENST00000477360 CCDC125Q86Z20 511 aa17.05■□□□□ 0.32
CLCNKA-205ENST00000477360 TCP11L2Q8N4U5 519 aa17.05■□□□□ 0.32
CLCNKA-205ENST00000477360 CDCA7Q9BWT1 371 aaPredicted RBP17.05■□□□□ 0.32
CLCNKA-205ENST00000477360 STRN4Q9NRL3 753 aa17.05■□□□□ 0.32
CLCNKA-205ENST00000477360 LARP1Q6PKG0 1096 aaKnown RBP17.04■□□□□ 0.32
CLCNKA-205ENST00000477360 IP6K1Q92551 441 aa17.04■□□□□ 0.32
CLCNKA-205ENST00000477360 CARD10Q9BWT7 1032 aa17.04■□□□□ 0.32
CLCNKA-205ENST00000477360 AXIN2Q9Y2T1 843 aa17.04■□□□□ 0.32
CLCNKA-205ENST00000477360 KIF7Q2M1P5 1343 aa17.03■□□□□ 0.32
CLCNKA-205ENST00000477360 C11orf95C9JLR9 678 aaPredicted RBP17.03■□□□□ 0.32
CLCNKA-205ENST00000477360 THSD7AQ9UPZ6 1657 aa17.03■□□□□ 0.32
CLCNKA-205ENST00000477360 ERBB3P21860 1342 aa17.02■□□□□ 0.32
CLCNKA-205ENST00000477360 FAM98CQ17RN3 349 aaKnown RBP17.02■□□□□ 0.32
CLCNKA-205ENST00000477360 UPF1Q92900 1129 aaKnown RBP eCLIP17.02■□□□□ 0.32
CLCNKA-205ENST00000477360 CCDC7Q96M83 1385 aa17.02■□□□□ 0.31
CLCNKA-205ENST00000477360 KRT27Q7Z3Y8 459 aa17.01■□□□□ 0.31
CLCNKA-205ENST00000477360 PANK3Q9H999 370 aa17.01■□□□□ 0.31
CLCNKA-205ENST00000477360 TOM1L2Q6ZVM7 507 aa17■□□□□ 0.31
CLCNKA-205ENST00000477360 GGNBP2Q9H3C7 697 aa17■□□□□ 0.31
CLCNKA-205ENST00000477360 MAP3K19Q56UN5 1328 aa16.99■□□□□ 0.31
CLCNKA-205ENST00000477360 KIF20BQ96Q89 1820 aa16.99■□□□□ 0.31
CLCNKA-205ENST00000477360 SOX12O15370 315 aa16.99■□□□□ 0.31
CLCNKA-205ENST00000477360 POLR3GLQ9BT43 218 aa16.98■□□□□ 0.31
CLCNKA-205ENST00000477360 ZBTB7CA1YPR0 619 aa16.97■□□□□ 0.31
CLCNKA-205ENST00000477360 KNSTRNQ9Y448 316 aa16.97■□□□□ 0.31
CLCNKA-205ENST00000477360 LTN1O94822 1766 aa16.97■□□□□ 0.31
CLCNKA-205ENST00000477360 CSB-PGBD3P0DP91 1061 aa16.96■□□□□ 0.31
CLCNKA-205ENST00000477360 HOXC9P31274 260 aa16.96■□□□□ 0.31
CLCNKA-205ENST00000477360 AMPHP49418 695 aa16.96■□□□□ 0.31
CLCNKA-205ENST00000477360 ANKRD24Q8TF21 1146 aa16.96■□□□□ 0.31
CLCNKA-205ENST00000477360 INSRP06213 1382 aa16.96■□□□□ 0.31
CLCNKA-205ENST00000477360 FLT4P35916 1363 aa16.96■□□□□ 0.31
CLCNKA-205ENST00000477360 NPC1L1Q9UHC9 1359 aa16.96■□□□□ 0.31
CLCNKA-205ENST00000477360 A0A0G2JS52 829 aa16.95■□□□□ 0.3
CLCNKA-205ENST00000477360 MYT1Q01538 1121 aa16.95■□□□□ 0.3
CLCNKA-205ENST00000477360 PARP4Q9UKK3 1724 aaKnown RBP16.95■□□□□ 0.3
CLCNKA-205ENST00000477360 DISP2A7MBM2 1401 aa16.95■□□□□ 0.3
CLCNKA-205ENST00000477360 WASHC2AQ641Q2 1341 aa16.95■□□□□ 0.3
CLCNKA-205ENST00000477360 FAM208AQ9UK61 1670 aaKnown RBP16.94■□□□□ 0.3
CLCNKA-205ENST00000477360 PDE3BQ13370 1112 aa16.94■□□□□ 0.3
CLCNKA-205ENST00000477360 FAM196AQ6ZSG2 479 aa16.94■□□□□ 0.3
CLCNKA-205ENST00000477360 USP35Q9P2H5 1018 aa16.94■□□□□ 0.3
CLCNKA-205ENST00000477360 BCL9O00512 1426 aa16.94■□□□□ 0.3
CLCNKA-205ENST00000477360 PER1O15534 1290 aaPredicted RBP16.93■□□□□ 0.3
CLCNKA-205ENST00000477360 SMG6Q86US8 1419 aaKnown RBP16.93■□□□□ 0.3
CLCNKA-205ENST00000477360 ANKRD26Q9UPS8 1709 aa16.93■□□□□ 0.3
CLCNKA-205ENST00000477360 BRWD3Q6RI45 1802 aa16.92■□□□□ 0.3
CLCNKA-205ENST00000477360 AMER1Q5JTC6 1135 aaPredicted RBP16.92■□□□□ 0.3
CLCNKA-205ENST00000477360 DDB1Q16531 1140 aa16.91■□□□□ 0.3
CLCNKA-205ENST00000477360 NLRP2Q9NX02 1062 aa16.91■□□□□ 0.3
CLCNKA-205ENST00000477360 PLEKHG2Q9H7P9 1386 aa16.9■□□□□ 0.3
CLCNKA-205ENST00000477360 RGPD5Q99666 1765 aa16.9■□□□□ 0.3
CLCNKA-205ENST00000477360 RRS1Q15050 365 aaKnown RBP16.9■□□□□ 0.3
CLCNKA-205ENST00000477360 IL2RBP14784 551 aa16.89■□□□□ 0.29
CLCNKA-205ENST00000477360 POLKQ9UBT6 870 aa16.89■□□□□ 0.29
CLCNKA-205ENST00000477360 OVOS2A0A0G2JMS6 1433 aa16.88■□□□□ 0.29
CLCNKA-205ENST00000477360 EXOC5O00471 708 aa16.88■□□□□ 0.29
CLCNKA-205ENST00000477360 MORC1Q86VD1 984 aa16.88■□□□□ 0.29
CLCNKA-205ENST00000477360 EP400Q96L91 3159 aa16.88■□□□□ 0.29
CLCNKA-205ENST00000477360 TNS2Q63HR2 1409 aa16.87■□□□□ 0.29
CLCNKA-205ENST00000477360 FBLN1P23142 703 aa16.87■□□□□ 0.29
CLCNKA-205ENST00000477360 SF3B2Q13435 895 aaKnown RBP16.87■□□□□ 0.29
CLCNKA-205ENST00000477360 NCAPD2Q15021 1401 aa16.87■□□□□ 0.29
CLCNKA-205ENST00000477360 WNK3Q9BYP7 1800 aa16.86■□□□□ 0.29
CLCNKA-205ENST00000477360 LRRC37A3O60309 1634 aa16.86■□□□□ 0.29
CLCNKA-205ENST00000477360 HSP90AB2PQ58FF8 381 aa16.86■□□□□ 0.29
CLCNKA-205ENST00000477360 EMILIN1Q9Y6C2 1016 aa16.85■□□□□ 0.29
CLCNKA-205ENST00000477360 PEAK1Q9H792 1746 aa16.84■□□□□ 0.29
CLCNKA-205ENST00000477360 PARD3Q8TEW0 1356 aa16.84■□□□□ 0.29
CLCNKA-205ENST00000477360 RGPD1P0DJD0 1748 aa16.82■□□□□ 0.28
CLCNKA-205ENST00000477360 BAG6P46379 1132 aa16.82■□□□□ 0.28
CLCNKA-205ENST00000477360 NBPF6Q5VWK0 638 aa16.82■□□□□ 0.28
CLCNKA-205ENST00000477360 LTV1Q96GA3 475 aaPredicted RBP16.82■□□□□ 0.28
CLCNKA-205ENST00000477360 NBPF4Q96M43 638 aa16.82■□□□□ 0.28
CLCNKA-205ENST00000477360 MARCH10Q8NA82 808 aaPredicted RBP16.81■□□□□ 0.28
CLCNKA-205ENST00000477360 RAPGEF4Q8WZA2 1011 aa16.8■□□□□ 0.28
CLCNKA-205ENST00000477360 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.8■□□□□ 0.28
CLCNKA-205ENST00000477360 MAP2P11137 1827 aaKnown RBP16.8■□□□□ 0.28
CLCNKA-205ENST00000477360 PPM1GO15355 546 aaPredicted RBP16.79■□□□□ 0.28
CLCNKA-205ENST00000477360 BCL11BQ9C0K0 894 aaPredicted RBP16.79■□□□□ 0.28
CLCNKA-205ENST00000477360 TATP17735 454 aaPredicted RBP16.77■□□□□ 0.28
CLCNKA-205ENST00000477360 TNNT2P45379 298 aaPredicted RBP16.77■□□□□ 0.28
CLCNKA-205ENST00000477360 EIF4A2Q14240 407 aaKnown RBP16.77■□□□□ 0.28
CLCNKA-205ENST00000477360 FAM182BQ5T319 152 aa16.77■□□□□ 0.28
CLCNKA-205ENST00000477360 ZCRB1Q8TBF4 217 aaKnown RBP16.77■□□□□ 0.28
CLCNKA-205ENST00000477360 IGSF1Q8N6C5 1336 aa16.76■□□□□ 0.27
CLCNKA-205ENST00000477360 PLSCR1O15162 318 aa16.76■□□□□ 0.27
CLCNKA-205ENST00000477360 TRIM37O94972 964 aa16.76■□□□□ 0.27
CLCNKA-205ENST00000477360 TNS1Q9HBL0 1735 aaKnown RBP16.76■□□□□ 0.27
CLCNKA-205ENST00000477360 MEGF6O75095 1541 aa16.75■□□□□ 0.27
CLCNKA-205ENST00000477360 EYA1Q99502 592 aa16.75■□□□□ 0.27
CLCNKA-205ENST00000477360 PCDH11XQ9BZA7 1347 aa16.73■□□□□ 0.27
CLCNKA-205ENST00000477360 PCDH11YQ9BZA8 1340 aa16.73■□□□□ 0.27
CLCNKA-205ENST00000477360 APBA3O96018 575 aa16.73■□□□□ 0.27
CLCNKA-205ENST00000477360 MTHFSP49914 203 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms