RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 TTC21BQ7Z4L5 1316 aa16.04■□□□□ 0.16
NUDCD3-206ENST00000475952 KIF20BQ96Q89 1820 aa16.04■□□□□ 0.16
NUDCD3-206ENST00000475952 GCP02774 474 aa16.04■□□□□ 0.16
NUDCD3-206ENST00000475952 NINLQ9Y2I6 1382 aa16.03■□□□□ 0.16
NUDCD3-206ENST00000475952 MYOM1P52179 1685 aa16.03■□□□□ 0.16
NUDCD3-206ENST00000475952 ST20-MTHFSA0A0A6YYL1 179 aa16.03■□□□□ 0.16
NUDCD3-206ENST00000475952 TMC1Q8TDI8 760 aa16.03■□□□□ 0.16
NUDCD3-206ENST00000475952 PUS7Q96PZ0 661 aaKnown RBP16.03■□□□□ 0.16
NUDCD3-206ENST00000475952 COL5A2P05997 1499 aaPredicted RBP16.03■□□□□ 0.16
NUDCD3-206ENST00000475952 STRN4Q9NRL3 753 aa16.02■□□□□ 0.16
NUDCD3-206ENST00000475952 NFAT5O94916 1531 aa16.02■□□□□ 0.15
NUDCD3-206ENST00000475952 ABCC6O95255 1503 aa16.02■□□□□ 0.15
NUDCD3-206ENST00000475952 PEAK1Q9H792 1746 aa16.02■□□□□ 0.15
NUDCD3-206ENST00000475952 HDGFL2Q7Z4V5 671 aaPredicted RBP16.01■□□□□ 0.15
NUDCD3-206ENST00000475952 TESK2Q96S53 571 aa16.01■□□□□ 0.15
NUDCD3-206ENST00000475952 EDC4Q6P2E9 1401 aaKnown RBP16.01■□□□□ 0.15
NUDCD3-206ENST00000475952 A0A1W2PP64 1363 aa16■□□□□ 0.15
NUDCD3-206ENST00000475952 EVA1CP58658 441 aa16■□□□□ 0.15
NUDCD3-206ENST00000475952 CCER1Q8TC90 406 aaPredicted RBP16■□□□□ 0.15
NUDCD3-206ENST00000475952 SPON1Q9HCB6 807 aa16■□□□□ 0.15
NUDCD3-206ENST00000475952 TERF2IPQ9NYB0 399 aa16■□□□□ 0.15
NUDCD3-206ENST00000475952 ZBTB7CA1YPR0 619 aa15.99■□□□□ 0.15
NUDCD3-206ENST00000475952 NBPF14Q5TI25 921 aa15.99■□□□□ 0.15
NUDCD3-206ENST00000475952 KCNH5Q8NCM2 988 aa15.99■□□□□ 0.15
NUDCD3-206ENST00000475952 PPP1R1BQ9UD71 204 aaPredicted RBP15.99■□□□□ 0.15
NUDCD3-206ENST00000475952 CHD4Q14839 1912 aa15.99■□□□□ 0.15
NUDCD3-206ENST00000475952 FAM208AQ9UK61 1670 aaKnown RBP15.99■□□□□ 0.15
NUDCD3-206ENST00000475952 KCNQ2O43526 872 aa15.98■□□□□ 0.15
NUDCD3-206ENST00000475952 BARGINQ6ZT62 677 aa15.98■□□□□ 0.15
NUDCD3-206ENST00000475952 USP35Q9P2H5 1018 aa15.98■□□□□ 0.15
NUDCD3-206ENST00000475952 AATKQ6ZMQ8 1374 aa15.98■□□□□ 0.15
NUDCD3-206ENST00000475952 LRRC37A3O60309 1634 aa15.97■□□□□ 0.15
NUDCD3-206ENST00000475952 CRB1P82279 1406 aa15.97■□□□□ 0.15
NUDCD3-206ENST00000475952 TMF1P82094 1093 aa15.97■□□□□ 0.15
NUDCD3-206ENST00000475952 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.97■□□□□ 0.15
NUDCD3-206ENST00000475952 SLC12A5Q9H2X9 1139 aa15.97■□□□□ 0.15
NUDCD3-206ENST00000475952 USP31Q70CQ4 1352 aa15.97■□□□□ 0.15
NUDCD3-206ENST00000475952 PDE3BQ13370 1112 aa15.96■□□□□ 0.15
NUDCD3-206ENST00000475952 CEP350Q5VT06 3117 aa15.95■□□□□ 0.14
NUDCD3-206ENST00000475952 OVOS2A0A0J9YW53 1432 aa15.94■□□□□ 0.14
NUDCD3-206ENST00000475952 OVOS2Q6IE36 1432 aa15.94■□□□□ 0.14
NUDCD3-206ENST00000475952 GOLGB1Q14789 3259 aaKnown RBP15.94■□□□□ 0.14
NUDCD3-206ENST00000475952 DCAF8L1A6NGE4 600 aa15.94■□□□□ 0.14
NUDCD3-206ENST00000475952 SOX12O15370 315 aa15.94■□□□□ 0.14
NUDCD3-206ENST00000475952 CDCA8Q53HL2 280 aa15.94■□□□□ 0.14
NUDCD3-206ENST00000475952 LARP1Q6PKG0 1096 aaKnown RBP15.94■□□□□ 0.14
NUDCD3-206ENST00000475952 ANKRD36BQ8N2N9 1353 aa15.94■□□□□ 0.14
NUDCD3-206ENST00000475952 TCP11L2Q8N4U5 519 aa15.93■□□□□ 0.14
NUDCD3-206ENST00000475952 THRAP3Q9Y2W1 955 aaKnown RBP15.93■□□□□ 0.14
NUDCD3-206ENST00000475952 ARHGEF25Q86VW2 580 aa15.92■□□□□ 0.14
NUDCD3-206ENST00000475952 NME9Q86XW9 330 aa15.92■□□□□ 0.14
NUDCD3-206ENST00000475952 ANKRD26Q9UPS8 1709 aa15.91■□□□□ 0.14
NUDCD3-206ENST00000475952 ANO8Q9HCE9 1232 aaPredicted RBP15.91■□□□□ 0.14
NUDCD3-206ENST00000475952 OVOS2A0A0G2JMS6 1433 aa15.91■□□□□ 0.14
NUDCD3-206ENST00000475952 WDR17Q8IZU2 1322 aa15.91■□□□□ 0.14
NUDCD3-206ENST00000475952 RGPD2P0DJD1 1756 aa15.9■□□□□ 0.14
NUDCD3-206ENST00000475952 KAT6BQ8WYB5 2073 aa15.9■□□□□ 0.14
NUDCD3-206ENST00000475952 TOM1L2Q6ZVM7 507 aa15.9■□□□□ 0.14
NUDCD3-206ENST00000475952 ZNF784Q8NCA9 323 aaPredicted RBP15.9■□□□□ 0.14
NUDCD3-206ENST00000475952 PDGFDQ9GZP0 370 aaPredicted RBP15.88■□□□□ 0.13
NUDCD3-206ENST00000475952 MAP2P11137 1827 aaKnown RBP15.87■□□□□ 0.13
NUDCD3-206ENST00000475952 CSB-PGBD3P0DP91 1061 aa15.87■□□□□ 0.13
NUDCD3-206ENST00000475952 AXIN2Q9Y2T1 843 aa15.87■□□□□ 0.13
NUDCD3-206ENST00000475952 PLSCR1O15162 318 aa15.86■□□□□ 0.13
NUDCD3-206ENST00000475952 COG3Q96JB2 828 aa15.86■□□□□ 0.13
NUDCD3-206ENST00000475952 CCDC7Q96M83 1385 aa15.86■□□□□ 0.13
NUDCD3-206ENST00000475952 C11orf95C9JLR9 678 aaPredicted RBP15.85■□□□□ 0.13
NUDCD3-206ENST00000475952 PTGER2P43116 358 aa15.85■□□□□ 0.13
NUDCD3-206ENST00000475952 ZBTB7AO95365 584 aa15.84■□□□□ 0.13
NUDCD3-206ENST00000475952 EIF4G2P78344 907 aaKnown RBP eCLIP15.84■□□□□ 0.13
NUDCD3-206ENST00000475952 PTF1AQ7RTS3 328 aa15.84■□□□□ 0.13
NUDCD3-206ENST00000475952 CDCA7Q9BWT1 371 aaPredicted RBP15.84■□□□□ 0.13
NUDCD3-206ENST00000475952 ERBB3P21860 1342 aa15.84■□□□□ 0.13
NUDCD3-206ENST00000475952 SENP3-EIF4A1A0A087X0R7 540 aa15.83■□□□□ 0.12
NUDCD3-206ENST00000475952 CARD10Q9BWT7 1032 aa15.83■□□□□ 0.12
NUDCD3-206ENST00000475952 DDB1Q16531 1140 aa15.82■□□□□ 0.12
NUDCD3-206ENST00000475952 PROM2Q8N271 834 aa15.82■□□□□ 0.12
NUDCD3-206ENST00000475952 NSD3Q9BZ95 1437 aa15.82■□□□□ 0.12
NUDCD3-206ENST00000475952 TNS2Q63HR2 1409 aa15.81■□□□□ 0.12
NUDCD3-206ENST00000475952 NHSQ6T4R5 1651 aa15.8■□□□□ 0.12
NUDCD3-206ENST00000475952 BCL9O00512 1426 aa15.8■□□□□ 0.12
NUDCD3-206ENST00000475952 RTL1A6NKG5 1358 aa15.8■□□□□ 0.12
NUDCD3-206ENST00000475952 BCL11BQ9C0K0 894 aaPredicted RBP15.8■□□□□ 0.12
NUDCD3-206ENST00000475952 ATF5Q9Y2D1 282 aaPredicted RBP15.8■□□□□ 0.12
NUDCD3-206ENST00000475952 SHANK3Q9BYB0 1731 aa15.8■□□□□ 0.12
NUDCD3-206ENST00000475952 PAPPAQ13219 1627 aa15.79■□□□□ 0.12
NUDCD3-206ENST00000475952 C1QTNF8P60827 252 aa15.79■□□□□ 0.12
NUDCD3-206ENST00000475952 ANKRD24Q8TF21 1146 aa15.79■□□□□ 0.12
NUDCD3-206ENST00000475952 FHDC1Q9C0D6 1143 aaPredicted RBP15.79■□□□□ 0.12
NUDCD3-206ENST00000475952 FYB1O15117 783 aa15.78■□□□□ 0.12
NUDCD3-206ENST00000475952 HSPA5P11021 654 aaKnown RBP15.78■□□□□ 0.12
NUDCD3-206ENST00000475952 IP6K1Q92551 441 aa15.78■□□□□ 0.12
NUDCD3-206ENST00000475952 SYT17Q9BSW7 474 aa15.78■□□□□ 0.12
NUDCD3-206ENST00000475952 POLR3GLQ9BT43 218 aa15.78■□□□□ 0.12
NUDCD3-206ENST00000475952 GGNBP2Q9H3C7 697 aa15.78■□□□□ 0.12
NUDCD3-206ENST00000475952 NLRP2Q9NX02 1062 aa15.78■□□□□ 0.12
NUDCD3-206ENST00000475952 MAP3K19Q56UN5 1328 aa15.77■□□□□ 0.12
NUDCD3-206ENST00000475952 SGIP1Q9BQI5 828 aa15.77■□□□□ 0.12
NUDCD3-206ENST00000475952 BTAF1O14981 1849 aa15.77■□□□□ 0.11
NUDCD3-206ENST00000475952 SMG6Q86US8 1419 aaKnown RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms