RNA–Protein interactions for RNA: ENST00000474394.5

RNF220-210, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 810 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-210ENST00000474394 PPP1R1BQ9UD71 204 aaPredicted RBP14.96□□□□□ -0.01
RNF220-210ENST00000474394 USP31Q70CQ4 1352 aa14.96□□□□□ -0.02
RNF220-210ENST00000474394 NRAPQ86VF7 1730 aa14.95□□□□□ -0.02
RNF220-210ENST00000474394 SENP3-EIF4A1A0A087X0R7 540 aa14.95□□□□□ -0.02
RNF220-210ENST00000474394 ZBTB7CA1YPR0 619 aa14.95□□□□□ -0.02
RNF220-210ENST00000474394 EVA1CP58658 441 aa14.94□□□□□ -0.02
RNF220-210ENST00000474394 POLR3GLQ9BT43 218 aa14.94□□□□□ -0.02
RNF220-210ENST00000474394 SOX12O15370 315 aa14.93□□□□□ -0.02
RNF220-210ENST00000474394 ZNF784Q8NCA9 323 aaPredicted RBP14.93□□□□□ -0.02
RNF220-210ENST00000474394 SPON1Q9HCB6 807 aa14.93□□□□□ -0.02
RNF220-210ENST00000474394 STRN4Q9NRL3 753 aa14.93□□□□□ -0.02
RNF220-210ENST00000474394 ARHGEF25Q86VW2 580 aa14.92□□□□□ -0.02
RNF220-210ENST00000474394 AATKQ6ZMQ8 1374 aa14.92□□□□□ -0.02
RNF220-210ENST00000474394 PARD3Q8TEW0 1356 aa14.92□□□□□ -0.02
RNF220-210ENST00000474394 SPATA31A5Q5VU36 1347 aa14.92□□□□□ -0.02
RNF220-210ENST00000474394 SPATA31A7Q8IWB4 1347 aa14.92□□□□□ -0.02
RNF220-210ENST00000474394 USP54Q70EL1 1684 aa14.91□□□□□ -0.02
RNF220-210ENST00000474394 CAMTA1Q9Y6Y1 1673 aa14.91□□□□□ -0.02
RNF220-210ENST00000474394 NBPF14Q5TI25 921 aa14.91□□□□□ -0.02
RNF220-210ENST00000474394 COG3Q96JB2 828 aa14.91□□□□□ -0.02
RNF220-210ENST00000474394 LMO7Q8WWI1 1683 aa14.9□□□□□ -0.02
RNF220-210ENST00000474394 KCNQ2O43526 872 aa14.9□□□□□ -0.02
RNF220-210ENST00000474394 TRIM37O94972 964 aa14.9□□□□□ -0.02
RNF220-210ENST00000474394 APBA3O96018 575 aa14.9□□□□□ -0.02
RNF220-210ENST00000474394 OVOS2A0A0J9YW53 1432 aa14.9□□□□□ -0.02
RNF220-210ENST00000474394 OVOS2Q6IE36 1432 aa14.9□□□□□ -0.02
RNF220-210ENST00000474394 MYOM1P52179 1685 aa14.9□□□□□ -0.02
RNF220-210ENST00000474394 NFAT5O94916 1531 aa14.89□□□□□ -0.03
RNF220-210ENST00000474394 FAM196AQ6ZSG2 479 aa14.89□□□□□ -0.03
RNF220-210ENST00000474394 SPATA31A1Q5TZJ5 1347 aa14.89□□□□□ -0.03
RNF220-210ENST00000474394 C1QTNF8P60827 252 aa14.88□□□□□ -0.03
RNF220-210ENST00000474394 LARP1Q6PKG0 1096 aaKnown RBP14.88□□□□□ -0.03
RNF220-210ENST00000474394 CEP350Q5VT06 3117 aa14.88□□□□□ -0.03
RNF220-210ENST00000474394 COL5A2P05997 1499 aaPredicted RBP14.88□□□□□ -0.03
RNF220-210ENST00000474394 FYB1O15117 783 aa14.87□□□□□ -0.03
RNF220-210ENST00000474394 CARD14Q9BXL6 1004 aa14.87□□□□□ -0.03
RNF220-210ENST00000474394 RREB1Q92766 1687 aa14.87□□□□□ -0.03
RNF220-210ENST00000474394 NUP188Q5SRE5 1749 aa14.86□□□□□ -0.03
RNF220-210ENST00000474394 COL18A1P39060 1754 aa14.86□□□□□ -0.03
RNF220-210ENST00000474394 NSD3Q9BZ95 1437 aa14.86□□□□□ -0.03
RNF220-210ENST00000474394 ZEB1P37275 1124 aaPredicted RBP14.86□□□□□ -0.03
RNF220-210ENST00000474394 GGNBP2Q9H3C7 697 aa14.86□□□□□ -0.03
RNF220-210ENST00000474394 USP35Q9P2H5 1018 aa14.86□□□□□ -0.03
RNF220-210ENST00000474394 AXIN2Q9Y2T1 843 aa14.86□□□□□ -0.03
RNF220-210ENST00000474394 THSD7AQ9UPZ6 1657 aa14.86□□□□□ -0.03
RNF220-210ENST00000474394 ABCC6O95255 1503 aa14.86□□□□□ -0.03
RNF220-210ENST00000474394 C11orf95C9JLR9 678 aaPredicted RBP14.85□□□□□ -0.03
RNF220-210ENST00000474394 TCP11L2Q8N4U5 519 aa14.85□□□□□ -0.03
RNF220-210ENST00000474394 CRB1P82279 1406 aa14.84□□□□□ -0.03
RNF220-210ENST00000474394 CSB-PGBD3P0DP91 1061 aa14.84□□□□□ -0.03
RNF220-210ENST00000474394 BARGINQ6ZT62 677 aa14.84□□□□□ -0.03
RNF220-210ENST00000474394 TOM1L2Q6ZVM7 507 aa14.84□□□□□ -0.03
RNF220-210ENST00000474394 THRAP3Q9Y2W1 955 aaKnown RBP14.84□□□□□ -0.03
RNF220-210ENST00000474394 CGNL1Q0VF96 1302 aa14.84□□□□□ -0.03
RNF220-210ENST00000474394 WDR17Q8IZU2 1322 aa14.84□□□□□ -0.03
RNF220-210ENST00000474394 PANK3Q9H999 370 aa14.83□□□□□ -0.04
RNF220-210ENST00000474394 KIF20BQ96Q89 1820 aa14.82□□□□□ -0.04
RNF220-210ENST00000474394 CHD4Q14839 1912 aa14.82□□□□□ -0.04
RNF220-210ENST00000474394 KIF7Q2M1P5 1343 aa14.82□□□□□ -0.04
RNF220-210ENST00000474394 LTN1O94822 1766 aa14.82□□□□□ -0.04
RNF220-210ENST00000474394 RGPD5Q99666 1765 aa14.81□□□□□ -0.04
RNF220-210ENST00000474394 IP6K1Q92551 441 aa14.81□□□□□ -0.04
RNF220-210ENST00000474394 AMPHP49418 695 aa14.8□□□□□ -0.04
RNF220-210ENST00000474394 CARD10Q9BWT7 1032 aa14.8□□□□□ -0.04
RNF220-210ENST00000474394 MAP3K19Q56UN5 1328 aa14.8□□□□□ -0.04
RNF220-210ENST00000474394 ERBB3P21860 1342 aa14.79□□□□□ -0.04
RNF220-210ENST00000474394 FBLN1P23142 703 aa14.79□□□□□ -0.04
RNF220-210ENST00000474394 ANKRD24Q8TF21 1146 aa14.79□□□□□ -0.04
RNF220-210ENST00000474394 CCDC7Q96M83 1385 aa14.78□□□□□ -0.04
RNF220-210ENST00000474394 HOXC9P31274 260 aa14.78□□□□□ -0.04
RNF220-210ENST00000474394 RRS1Q15050 365 aaKnown RBP14.78□□□□□ -0.04
RNF220-210ENST00000474394 RTL1A6NKG5 1358 aa14.77□□□□□ -0.04
RNF220-210ENST00000474394 PDE3BQ13370 1112 aa14.77□□□□□ -0.05
RNF220-210ENST00000474394 CDCA7Q9BWT1 371 aaPredicted RBP14.77□□□□□ -0.05
RNF220-210ENST00000474394 NLRP2Q9NX02 1062 aa14.77□□□□□ -0.05
RNF220-210ENST00000474394 KNSTRNQ9Y448 316 aa14.77□□□□□ -0.05
RNF220-210ENST00000474394 NSD2O96028 1365 aa14.75□□□□□ -0.05
RNF220-210ENST00000474394 LTV1Q96GA3 475 aaPredicted RBP14.75□□□□□ -0.05
RNF220-210ENST00000474394 KIF24Q5T7B8 1368 aa14.74□□□□□ -0.05
RNF220-210ENST00000474394 DDB1Q16531 1140 aa14.74□□□□□ -0.05
RNF220-210ENST00000474394 PARP4Q9UKK3 1724 aaKnown RBP14.74□□□□□ -0.05
RNF220-210ENST00000474394 FLT4P35916 1363 aa14.73□□□□□ -0.05
RNF220-210ENST00000474394 WASHC2AQ641Q2 1341 aa14.73□□□□□ -0.05
RNF220-210ENST00000474394 ANKRD26Q9UPS8 1709 aa14.72□□□□□ -0.05
RNF220-210ENST00000474394 EMILIN1Q9Y6C2 1016 aa14.72□□□□□ -0.05
RNF220-210ENST00000474394 SMG6Q86US8 1419 aaKnown RBP14.72□□□□□ -0.05
RNF220-210ENST00000474394 CASZ1Q86V15 1759 aa14.72□□□□□ -0.05
RNF220-210ENST00000474394 INSRP06213 1382 aa14.72□□□□□ -0.05
RNF220-210ENST00000474394 FAM208AQ9UK61 1670 aaKnown RBP14.71□□□□□ -0.05
RNF220-210ENST00000474394 WNK3Q9BYP7 1800 aa14.71□□□□□ -0.05
RNF220-210ENST00000474394 PPM1GO15355 546 aaPredicted RBP14.71□□□□□ -0.05
RNF220-210ENST00000474394 IL2RBP14784 551 aa14.71□□□□□ -0.05
RNF220-210ENST00000474394 TNNT2P45379 298 aaPredicted RBP14.71□□□□□ -0.05
RNF220-210ENST00000474394 MORC1Q86VD1 984 aa14.71□□□□□ -0.05
RNF220-210ENST00000474394 SYT17Q9BSW7 474 aa14.71□□□□□ -0.05
RNF220-210ENST00000474394 EXOC5O00471 708 aa14.7□□□□□ -0.06
RNF220-210ENST00000474394 GIGYF1O75420 1035 aaPredicted RBP14.7□□□□□ -0.06
RNF220-210ENST00000474394 PTGER2P43116 358 aa14.7□□□□□ -0.06
RNF220-210ENST00000474394 HSP90AB2PQ58FF8 381 aa14.7□□□□□ -0.06
RNF220-210ENST00000474394 LRRC37A3O60309 1634 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms