RNA–Protein interactions for RNA: ENST00000469990.1

LMNTD2-203, Transcript of lamin tail domain containing 2, humanhuman

TSL 1 (best)

Gene LMNTD2, Length 1,232 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD2-203ENST00000469990 CCDC7Q96M83 1385 aa36.89■■■■□ 3.5
LMNTD2-203ENST00000469990 SPATA31A1Q5TZJ5 1347 aa36.88■■■■□ 3.49
LMNTD2-203ENST00000469990 GLI3P10071 1580 aa36.88■■■■□ 3.49
LMNTD2-203ENST00000469990 AXIN2Q9Y2T1 843 aa36.88■■■■□ 3.49
LMNTD2-203ENST00000469990 COL5A2P05997 1499 aaPredicted RBP36.88■■■■□ 3.49
LMNTD2-203ENST00000469990 LARP1Q6PKG0 1096 aaKnown RBP36.87■■■■□ 3.49
LMNTD2-203ENST00000469990 KNSTRNQ9Y448 316 aa36.87■■■■□ 3.49
LMNTD2-203ENST00000469990 KIF20BQ96Q89 1820 aa36.85■■■■□ 3.49
LMNTD2-203ENST00000469990 WASHC2AQ641Q2 1341 aa36.85■■■■□ 3.49
LMNTD2-203ENST00000469990 THRAP3Q9Y2W1 955 aaKnown RBP36.84■■■■□ 3.49
LMNTD2-203ENST00000469990 CSB-PGBD3P0DP91 1061 aa36.83■■■■□ 3.49
LMNTD2-203ENST00000469990 FAM98CQ17RN3 349 aaKnown RBP36.83■■■■□ 3.49
LMNTD2-203ENST00000469990 SEPT12Q8IYM1 358 aa36.83■■■■□ 3.49
LMNTD2-203ENST00000469990 COL18A1P39060 1754 aa36.83■■■■□ 3.49
LMNTD2-203ENST00000469990 WDR17Q8IZU2 1322 aa36.83■■■■□ 3.49
LMNTD2-203ENST00000469990 A0A0G2JS52 829 aa36.82■■■■□ 3.48
LMNTD2-203ENST00000469990 MYT1Q01538 1121 aa36.82■■■■□ 3.48
LMNTD2-203ENST00000469990 TOM1L2Q6ZVM7 507 aa36.82■■■■□ 3.48
LMNTD2-203ENST00000469990 IP6K1Q92551 441 aa36.82■■■■□ 3.48
LMNTD2-203ENST00000469990 AMPHP49418 695 aa36.81■■■■□ 3.48
LMNTD2-203ENST00000469990 TCP11L2Q8N4U5 519 aa36.81■■■■□ 3.48
LMNTD2-203ENST00000469990 USP35Q9P2H5 1018 aa36.81■■■■□ 3.48
LMNTD2-203ENST00000469990 CRB1P82279 1406 aa36.81■■■■□ 3.48
LMNTD2-203ENST00000469990 NSD2O96028 1365 aa36.8■■■■□ 3.48
LMNTD2-203ENST00000469990 BARGINQ6ZT62 677 aa36.8■■■■□ 3.48
LMNTD2-203ENST00000469990 MAP3K19Q56UN5 1328 aa36.79■■■■□ 3.48
LMNTD2-203ENST00000469990 BLMP54132 1417 aaPredicted RBP36.78■■■■□ 3.48
LMNTD2-203ENST00000469990 LTN1O94822 1766 aa36.76■■■■□ 3.48
LMNTD2-203ENST00000469990 CARD10Q9BWT7 1032 aa36.74■■■■□ 3.47
LMNTD2-203ENST00000469990 RTL1A6NKG5 1358 aa36.74■■■■□ 3.47
LMNTD2-203ENST00000469990 KIF24Q5T7B8 1368 aa36.74■■■■□ 3.47
LMNTD2-203ENST00000469990 RRS1Q15050 365 aaKnown RBP36.73■■■■□ 3.47
LMNTD2-203ENST00000469990 ERBB3P21860 1342 aa36.72■■■■□ 3.47
LMNTD2-203ENST00000469990 FBLN1P23142 703 aa36.72■■■■□ 3.47
LMNTD2-203ENST00000469990 HOXC9P31274 260 aa36.72■■■■□ 3.47
LMNTD2-203ENST00000469990 ANKRD24Q8TF21 1146 aa36.72■■■■□ 3.47
LMNTD2-203ENST00000469990 KRT27Q7Z3Y8 459 aa36.7■■■■□ 3.47
LMNTD2-203ENST00000469990 CDCA7Q9BWT1 371 aaPredicted RBP36.7■■■■□ 3.47
LMNTD2-203ENST00000469990 PER1O15534 1290 aaPredicted RBP36.68■■■■□ 3.46
LMNTD2-203ENST00000469990 MORC1Q86VD1 984 aa36.68■■■■□ 3.46
LMNTD2-203ENST00000469990 NLRP2Q9NX02 1062 aa36.68■■■■□ 3.46
LMNTD2-203ENST00000469990 RGPD5Q99666 1765 aa36.67■■■■□ 3.46
LMNTD2-203ENST00000469990 AMER1Q5JTC6 1135 aaPredicted RBP36.65■■■■□ 3.46
LMNTD2-203ENST00000469990 FLT4P35916 1363 aa36.65■■■■□ 3.46
LMNTD2-203ENST00000469990 LTV1Q96GA3 475 aaPredicted RBP36.63■■■■□ 3.45
LMNTD2-203ENST00000469990 ANKRD26Q9UPS8 1709 aa36.62■■■■□ 3.45
LMNTD2-203ENST00000469990 SMG6Q86US8 1419 aaKnown RBP36.61■■■■□ 3.45
LMNTD2-203ENST00000469990 PPM1GO15355 546 aaPredicted RBP36.61■■■■□ 3.45
LMNTD2-203ENST00000469990 TNNT2P45379 298 aaPredicted RBP36.61■■■■□ 3.45
LMNTD2-203ENST00000469990 PDE3BQ13370 1112 aa36.61■■■■□ 3.45
LMNTD2-203ENST00000469990 INSRP06213 1382 aa36.61■■■■□ 3.45
LMNTD2-203ENST00000469990 THSD7AQ9UPZ6 1657 aa36.61■■■■□ 3.45
LMNTD2-203ENST00000469990 UPF1Q92900 1129 aaKnown RBP eCLIP36.6■■■■□ 3.45
LMNTD2-203ENST00000469990 POLKQ9UBT6 870 aa36.59■■■■□ 3.45
LMNTD2-203ENST00000469990 EMILIN1Q9Y6C2 1016 aa36.59■■■■□ 3.45
LMNTD2-203ENST00000469990 NPC1L1Q9UHC9 1359 aa36.57■■■■□ 3.45
LMNTD2-203ENST00000469990 HSP90AB2PQ58FF8 381 aa36.57■■■■□ 3.44
LMNTD2-203ENST00000469990 CCDC125Q86Z20 511 aa36.57■■■■□ 3.44
LMNTD2-203ENST00000469990 BRWD3Q6RI45 1802 aa36.55■■■■□ 3.44
LMNTD2-203ENST00000469990 DDB1Q16531 1140 aa36.55■■■■□ 3.44
LMNTD2-203ENST00000469990 FAM208AQ9UK61 1670 aaKnown RBP36.52■■■■□ 3.44
LMNTD2-203ENST00000469990 CC2D1BQ5T0F9 858 aaKnown RBP36.52■■■■□ 3.44
LMNTD2-203ENST00000469990 IL2RBP14784 551 aa36.51■■■■□ 3.44
LMNTD2-203ENST00000469990 EXOC5O00471 708 aa36.5■■■■□ 3.43
LMNTD2-203ENST00000469990 MAP2P11137 1827 aaKnown RBP36.5■■■■□ 3.43
LMNTD2-203ENST00000469990 FAM196AQ6ZSG2 479 aa36.49■■■■□ 3.43
LMNTD2-203ENST00000469990 PARP4Q9UKK3 1724 aaKnown RBP36.48■■■■□ 3.43
LMNTD2-203ENST00000469990 PEAK1Q9H792 1746 aa36.46■■■■□ 3.43
LMNTD2-203ENST00000469990 DISP2A7MBM2 1401 aa36.46■■■■□ 3.43
LMNTD2-203ENST00000469990 NBPF6Q5VWK0 638 aa36.45■■■■□ 3.43
LMNTD2-203ENST00000469990 NBPF4Q96M43 638 aa36.45■■■■□ 3.43
LMNTD2-203ENST00000469990 SF3B2Q13435 895 aaKnown RBP36.44■■■■□ 3.42
LMNTD2-203ENST00000469990 FAM182BQ5T319 152 aa36.4■■■■□ 3.42
LMNTD2-203ENST00000469990 RAPGEF4Q8WZA2 1011 aa36.39■■■■□ 3.42
LMNTD2-203ENST00000469990 WNK3Q9BYP7 1800 aa36.38■■■■□ 3.42
LMNTD2-203ENST00000469990 CNGB1Q14028 1251 aaPredicted RBP36.37■■■■□ 3.41
LMNTD2-203ENST00000469990 LRRC37A3O60309 1634 aa36.36■■■■□ 3.41
LMNTD2-203ENST00000469990 MTHFSP49914 203 aa36.35■■■■□ 3.41
LMNTD2-203ENST00000469990 EIF4A2Q14240 407 aaKnown RBP36.35■■■■□ 3.41
LMNTD2-203ENST00000469990 OVOS2A0A0G2JMS6 1433 aa36.34■■■■□ 3.41
LMNTD2-203ENST00000469990 TNS2Q63HR2 1409 aa36.34■■■■□ 3.41
LMNTD2-203ENST00000469990 TATP17735 454 aaPredicted RBP36.33■■■■□ 3.41
LMNTD2-203ENST00000469990 USHBP1Q8N6Y0 703 aa36.33■■■■□ 3.41
LMNTD2-203ENST00000469990 MARCH10Q8NA82 808 aaPredicted RBP36.32■■■■□ 3.4
LMNTD2-203ENST00000469990 EYA1Q99502 592 aa36.32■■■■□ 3.4
LMNTD2-203ENST00000469990 EP400Q96L91 3159 aa36.31■■■■□ 3.4
LMNTD2-203ENST00000469990 DDX10Q13206 875 aaKnown RBP36.31■■■■□ 3.4
LMNTD2-203ENST00000469990 ZCRB1Q8TBF4 217 aaKnown RBP36.29■■■■□ 3.4
LMNTD2-203ENST00000469990 RGPD2P0DJD1 1756 aa36.28■■■■□ 3.4
LMNTD2-203ENST00000469990 BCL9O00512 1426 aa36.28■■■■□ 3.4
LMNTD2-203ENST00000469990 TRIM37O94972 964 aa36.26■■■■□ 3.4
LMNTD2-203ENST00000469990 BAG6P46379 1132 aa36.25■■■■□ 3.39
LMNTD2-203ENST00000469990 NCAPD2Q15021 1401 aa36.25■■■■□ 3.39
LMNTD2-203ENST00000469990 DDX54Q8TDD1 881 aaKnown RBP36.24■■■■□ 3.39
LMNTD2-203ENST00000469990 IGSF1Q8N6C5 1336 aa36.22■■■■□ 3.39
LMNTD2-203ENST00000469990 MEGF6O75095 1541 aa36.22■■■■□ 3.39
LMNTD2-203ENST00000469990 IL13P35225 146 aa36.21■■■■□ 3.39
LMNTD2-203ENST00000469990 CFAP53Q96M91 514 aa36.21■■■■□ 3.39
LMNTD2-203ENST00000469990 DIAPH1O60610 1272 aaKnown RBP36.2■■■■□ 3.39
LMNTD2-203ENST00000469990 RGPD1P0DJD0 1748 aa36.2■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms