RNA–Protein interactions for RNA: ENST00000469389.5

SYP-204, Transcript of synaptophysin, humanhuman

TSL 4

Gene SYP, Length 581 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-204ENST00000469389 USP21Q9UK80 565 aa21.32■■□□□ 1
SYP-204ENST00000469389 FLT4P35916 1363 aa21.32■■□□□ 1
SYP-204ENST00000469389 PLCH1Q4KWH8 1693 aa21.31■■□□□ 1
SYP-204ENST00000469389 FBLN1P23142 703 aa21.31■■□□□ 1
SYP-204ENST00000469389 POLKQ9UBT6 870 aa21.31■■□□□ 1
SYP-204ENST00000469389 NWD2Q9ULI1 1742 aa21.31■■□□□ 1
SYP-204ENST00000469389 BLMP54132 1417 aaPredicted RBP21.3■■□□□ 1
SYP-204ENST00000469389 FNBP4Q8N3X1 1017 aaPredicted RBP21.3■■□□□ 1
SYP-204ENST00000469389 STRN4Q9NRL3 753 aa21.3■■□□□ 1
SYP-204ENST00000469389 CCDC9Q9Y3X0 531 aaKnown RBP21.3■■□□□ 1
SYP-204ENST00000469389 EMILIN1Q9Y6C2 1016 aa21.3■■□□□ 1
SYP-204ENST00000469389 PARD3Q8TEW0 1356 aa21.3■■□□□ 1
SYP-204ENST00000469389 HOXC9P31274 260 aa21.29■■□□□ 1
SYP-204ENST00000469389 UNC5CLQ8IV45 518 aa21.29■■□□□ 1
SYP-204ENST00000469389 MTHFSP49914 203 aa21.28■■□□□ 1
SYP-204ENST00000469389 MYBBP1AQ9BQG0 1328 aaKnown RBP21.28■■□□□ 1
SYP-204ENST00000469389 PPP2R1AP30153 589 aa21.27■■□□□ 1
SYP-204ENST00000469389 DIEXFQ68CQ4 756 aaKnown RBP21.27■■□□□ 1
SYP-204ENST00000469389 LTV1Q96GA3 475 aaPredicted RBP21.27■■□□□ 1
SYP-204ENST00000469389 PRKRIP1Q9H875 184 aaPredicted RBP21.27■■□□□ 1
SYP-204ENST00000469389 SLIT2O94813 1529 aa21.27■■□□□ 1
SYP-204ENST00000469389 TRPC5Q9UL62 973 aaPredicted RBP21.26■□□□□ 0.99
SYP-204ENST00000469389 INSRP06213 1382 aa21.25■□□□□ 0.99
SYP-204ENST00000469389 LMO7Q8WWI1 1683 aa21.25■□□□□ 0.99
SYP-204ENST00000469389 TOM1L2Q6ZVM7 507 aa21.25■□□□□ 0.99
SYP-204ENST00000469389 ANKRD24Q8TF21 1146 aa21.25■□□□□ 0.99
SYP-204ENST00000469389 CDK12Q9NYV4 1490 aaPredicted RBP21.25■□□□□ 0.99
SYP-204ENST00000469389 AXIN2Q9Y2T1 843 aa21.24■□□□□ 0.99
SYP-204ENST00000469389 CAMTA1Q9Y6Y1 1673 aa21.24■□□□□ 0.99
SYP-204ENST00000469389 COL18A1P39060 1754 aa21.23■□□□□ 0.99
SYP-204ENST00000469389 RGPD5Q99666 1765 aa21.23■□□□□ 0.99
SYP-204ENST00000469389 HSP90AB2PQ58FF8 381 aa21.23■□□□□ 0.99
SYP-204ENST00000469389 NLRP2Q9NX02 1062 aa21.23■□□□□ 0.99
SYP-204ENST00000469389 COL5A2P05997 1499 aaPredicted RBP21.23■□□□□ 0.99
SYP-204ENST00000469389 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.23■□□□□ 0.99
SYP-204ENST00000469389 QTRT2Q9H974 415 aaKnown RBP21.22■□□□□ 0.99
SYP-204ENST00000469389 ERBB3P21860 1342 aa21.22■□□□□ 0.99
SYP-204ENST00000469389 WDR17Q8IZU2 1322 aa21.22■□□□□ 0.99
SYP-204ENST00000469389 VPS72Q15906 364 aa21.21■□□□□ 0.99
SYP-204ENST00000469389 NUDCQ9Y266 331 aa21.21■□□□□ 0.99
SYP-204ENST00000469389 PEAK1Q9H792 1746 aa21.21■□□□□ 0.99
SYP-204ENST00000469389 BCL9LQ86UU0 1499 aa21.2■□□□□ 0.98
SYP-204ENST00000469389 FAM208AQ9UK61 1670 aaKnown RBP21.2■□□□□ 0.98
SYP-204ENST00000469389 CRB1P82279 1406 aa21.2■□□□□ 0.98
SYP-204ENST00000469389 NRAPQ86VF7 1730 aa21.19■□□□□ 0.98
SYP-204ENST00000469389 DIAPH1O60610 1272 aaKnown RBP21.19■□□□□ 0.98
SYP-204ENST00000469389 LARP1Q6PKG0 1096 aaKnown RBP21.19■□□□□ 0.98
SYP-204ENST00000469389 USP35Q9P2H5 1018 aa21.19■□□□□ 0.98
SYP-204ENST00000469389 EIF4A2Q14240 407 aaKnown RBP21.16■□□□□ 0.98
SYP-204ENST00000469389 GJD4Q96KN9 370 aaPredicted RBP21.16■□□□□ 0.98
SYP-204ENST00000469389 CARD10Q9BWT7 1032 aa21.16■□□□□ 0.98
SYP-204ENST00000469389 THRAP3Q9Y2W1 955 aaKnown RBP21.16■□□□□ 0.98
SYP-204ENST00000469389 ATRNO75882 1429 aa21.15■□□□□ 0.98
SYP-204ENST00000469389 A0A0G2JS52 829 aa21.15■□□□□ 0.98
SYP-204ENST00000469389 RXRBP28702 533 aa21.15■□□□□ 0.98
SYP-204ENST00000469389 RBM6P78332 1123 aaKnown RBP21.15■□□□□ 0.98
SYP-204ENST00000469389 MYT1Q01538 1121 aa21.15■□□□□ 0.98
SYP-204ENST00000469389 TCP11L2Q8N4U5 519 aa21.15■□□□□ 0.98
SYP-204ENST00000469389 SPATA31A5Q5VU36 1347 aa21.14■□□□□ 0.97
SYP-204ENST00000469389 SPATA31A7Q8IWB4 1347 aa21.14■□□□□ 0.97
SYP-204ENST00000469389 U2SURPO15042 1029 aaKnown RBP21.14■□□□□ 0.97
SYP-204ENST00000469389 SPATA31A1Q5TZJ5 1347 aa21.13■□□□□ 0.97
SYP-204ENST00000469389 CDCA7Q9BWT1 371 aaPredicted RBP21.12■□□□□ 0.97
SYP-204ENST00000469389 IL13P35225 146 aa21.11■□□□□ 0.97
SYP-204ENST00000469389 WDR43Q15061 677 aaKnown RBP eCLIP21.11■□□□□ 0.97
SYP-204ENST00000469389 RAPGEF4Q8WZA2 1011 aa21.11■□□□□ 0.97
SYP-204ENST00000469389 NBPF6Q5VWK0 638 aa21.1■□□□□ 0.97
SYP-204ENST00000469389 NBPF4Q96M43 638 aa21.1■□□□□ 0.97
SYP-204ENST00000469389 NEFMP07197 916 aa21.09■□□□□ 0.97
SYP-204ENST00000469389 FAM98CQ17RN3 349 aaKnown RBP21.09■□□□□ 0.97
SYP-204ENST00000469389 EYA1Q99502 592 aa21.09■□□□□ 0.97
SYP-204ENST00000469389 MRS2Q9HD23 443 aa21.09■□□□□ 0.97
SYP-204ENST00000469389 RGS17Q9UGC6 210 aaPredicted RBP21.09■□□□□ 0.97
SYP-204ENST00000469389 U2AF1L5P0DN76 240 aaPredicted RBP21.08■□□□□ 0.97
SYP-204ENST00000469389 IL2RBP14784 551 aa21.08■□□□□ 0.97
SYP-204ENST00000469389 U2AF1Q01081 240 aaKnown RBP eCLIP21.08■□□□□ 0.97
SYP-204ENST00000469389 BARGINQ6ZT62 677 aa21.08■□□□□ 0.97
SYP-204ENST00000469389 PNNQ9H307 717 aaKnown RBP21.08■□□□□ 0.97
SYP-204ENST00000469389 TATP17735 454 aaPredicted RBP21.07■□□□□ 0.96
SYP-204ENST00000469389 USHBP1Q8N6Y0 703 aa21.07■□□□□ 0.96
SYP-204ENST00000469389 RGPD2P0DJD1 1756 aa21.07■□□□□ 0.96
SYP-204ENST00000469389 IGSF1Q8N6C5 1336 aa21.06■□□□□ 0.96
SYP-204ENST00000469389 SULT6B1Q6IMI4 303 aa21.06■□□□□ 0.96
SYP-204ENST00000469389 POTEAQ6S8J7 498 aa21.06■□□□□ 0.96
SYP-204ENST00000469389 COL3A1P02461 1466 aaPredicted RBP21.06■□□□□ 0.96
SYP-204ENST00000469389 GLI3P10071 1580 aa21.03■□□□□ 0.96
SYP-204ENST00000469389 HMOX1P09601 288 aa21.03■□□□□ 0.96
SYP-204ENST00000469389 CCER2I3L3R5 266 aa21.02■□□□□ 0.96
SYP-204ENST00000469389 EXOC5O00471 708 aa21.02■□□□□ 0.96
SYP-204ENST00000469389 PDE3BQ13370 1112 aa21.02■□□□□ 0.96
SYP-204ENST00000469389 DDB1Q16531 1140 aa21.02■□□□□ 0.96
SYP-204ENST00000469389 PARP4Q9UKK3 1724 aaKnown RBP21.01■□□□□ 0.95
SYP-204ENST00000469389 SEPT12Q8IYM1 358 aa21.01■□□□□ 0.95
SYP-204ENST00000469389 FCHSD2O94868 740 aa21■□□□□ 0.95
SYP-204ENST00000469389 SPG7Q9UQ90 795 aa21■□□□□ 0.95
SYP-204ENST00000469389 RGPD1P0DJD0 1748 aa21■□□□□ 0.95
SYP-204ENST00000469389 WNK3Q9BYP7 1800 aa20.99■□□□□ 0.95
SYP-204ENST00000469389 ONECUT3O60422 494 aaPredicted RBP20.99■□□□□ 0.95
SYP-204ENST00000469389 PLEKHO1Q53GL0 409 aaPredicted RBP20.99■□□□□ 0.95
SYP-204ENST00000469389 AMOTQ4VCS5 1084 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms