RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 NWD2Q9ULI1 1742 aa18.66■□□□□ 0.58
SSBP1-206ENST00000467681 AMPHP49418 695 aa18.65■□□□□ 0.58
SSBP1-206ENST00000467681 USP54Q70EL1 1684 aa18.65■□□□□ 0.58
SSBP1-206ENST00000467681 SPATA31A1Q5TZJ5 1347 aa18.65■□□□□ 0.58
SSBP1-206ENST00000467681 CDK12Q9NYV4 1490 aaPredicted RBP18.65■□□□□ 0.58
SSBP1-206ENST00000467681 RRS1Q15050 365 aaKnown RBP18.64■□□□□ 0.57
SSBP1-206ENST00000467681 PLCH1Q4KWH8 1693 aa18.63■□□□□ 0.57
SSBP1-206ENST00000467681 CSB-PGBD3P0DP91 1061 aa18.62■□□□□ 0.57
SSBP1-206ENST00000467681 FAM98CQ17RN3 349 aaKnown RBP18.62■□□□□ 0.57
SSBP1-206ENST00000467681 TOM1L2Q6ZVM7 507 aa18.62■□□□□ 0.57
SSBP1-206ENST00000467681 MORC1Q86VD1 984 aa18.62■□□□□ 0.57
SSBP1-206ENST00000467681 SEPT12Q8IYM1 358 aa18.62■□□□□ 0.57
SSBP1-206ENST00000467681 TCP11L2Q8N4U5 519 aa18.62■□□□□ 0.57
SSBP1-206ENST00000467681 WDR17Q8IZU2 1322 aa18.62■□□□□ 0.57
SSBP1-206ENST00000467681 NSD2O96028 1365 aa18.62■□□□□ 0.57
SSBP1-206ENST00000467681 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.62■□□□□ 0.57
SSBP1-206ENST00000467681 COL18A1P39060 1754 aa18.62■□□□□ 0.57
SSBP1-206ENST00000467681 COL5A2P05997 1499 aaPredicted RBP18.61■□□□□ 0.57
SSBP1-206ENST00000467681 SOCS7O14512 581 aa18.61■□□□□ 0.57
SSBP1-206ENST00000467681 HOXC9P31274 260 aa18.61■□□□□ 0.57
SSBP1-206ENST00000467681 BARGINQ6ZT62 677 aa18.61■□□□□ 0.57
SSBP1-206ENST00000467681 USP35Q9P2H5 1018 aa18.61■□□□□ 0.57
SSBP1-206ENST00000467681 THRAP3Q9Y2W1 955 aaKnown RBP18.61■□□□□ 0.57
SSBP1-206ENST00000467681 LMO7Q8WWI1 1683 aa18.6■□□□□ 0.57
SSBP1-206ENST00000467681 TNNT2P45379 298 aaPredicted RBP18.6■□□□□ 0.57
SSBP1-206ENST00000467681 ANKRD24Q8TF21 1146 aa18.6■□□□□ 0.57
SSBP1-206ENST00000467681 CARD10Q9BWT7 1032 aa18.6■□□□□ 0.57
SSBP1-206ENST00000467681 POLKQ9UBT6 870 aa18.6■□□□□ 0.57
SSBP1-206ENST00000467681 RGS12O14924 1447 aa18.58■□□□□ 0.57
SSBP1-206ENST00000467681 NRAPQ86VF7 1730 aa18.58■□□□□ 0.57
SSBP1-206ENST00000467681 HSP90AB2PQ58FF8 381 aa18.58■□□□□ 0.56
SSBP1-206ENST00000467681 EMILIN1Q9Y6C2 1016 aa18.58■□□□□ 0.56
SSBP1-206ENST00000467681 GLI3P10071 1580 aa18.58■□□□□ 0.56
SSBP1-206ENST00000467681 CRB1P82279 1406 aa18.57■□□□□ 0.56
SSBP1-206ENST00000467681 ERBB3P21860 1342 aa18.57■□□□□ 0.56
SSBP1-206ENST00000467681 CC2D1BQ5T0F9 858 aaKnown RBP18.57■□□□□ 0.56
SSBP1-206ENST00000467681 LTV1Q96GA3 475 aaPredicted RBP18.57■□□□□ 0.56
SSBP1-206ENST00000467681 NLRP2Q9NX02 1062 aa18.57■□□□□ 0.56
SSBP1-206ENST00000467681 KIF24Q5T7B8 1368 aa18.56■□□□□ 0.56
SSBP1-206ENST00000467681 NPC1L1Q9UHC9 1359 aa18.56■□□□□ 0.56
SSBP1-206ENST00000467681 ABCC6O95255 1503 aa18.56■□□□□ 0.56
SSBP1-206ENST00000467681 PPM1GO15355 546 aaPredicted RBP18.56■□□□□ 0.56
SSBP1-206ENST00000467681 BLMP54132 1417 aaPredicted RBP18.56■□□□□ 0.56
SSBP1-206ENST00000467681 A0A0G2JS52 829 aa18.55■□□□□ 0.56
SSBP1-206ENST00000467681 MYT1Q01538 1121 aa18.55■□□□□ 0.56
SSBP1-206ENST00000467681 RTL1A6NKG5 1358 aa18.55■□□□□ 0.56
SSBP1-206ENST00000467681 KIF20BQ96Q89 1820 aa18.54■□□□□ 0.56
SSBP1-206ENST00000467681 INSRP06213 1382 aa18.54■□□□□ 0.56
SSBP1-206ENST00000467681 DDX10Q13206 875 aaKnown RBP18.53■□□□□ 0.56
SSBP1-206ENST00000467681 KRT27Q7Z3Y8 459 aa18.53■□□□□ 0.56
SSBP1-206ENST00000467681 CDCA7Q9BWT1 371 aaPredicted RBP18.53■□□□□ 0.56
SSBP1-206ENST00000467681 FLT4P35916 1363 aa18.53■□□□□ 0.56
SSBP1-206ENST00000467681 RGPD5Q99666 1765 aa18.51■□□□□ 0.55
SSBP1-206ENST00000467681 LTN1O94822 1766 aa18.5■□□□□ 0.55
SSBP1-206ENST00000467681 CNGB1Q14028 1251 aaPredicted RBP18.5■□□□□ 0.55
SSBP1-206ENST00000467681 NBPF6Q5VWK0 638 aa18.5■□□□□ 0.55
SSBP1-206ENST00000467681 NBPF4Q96M43 638 aa18.5■□□□□ 0.55
SSBP1-206ENST00000467681 PDE3BQ13370 1112 aa18.49■□□□□ 0.55
SSBP1-206ENST00000467681 MTHFSP49914 203 aa18.48■□□□□ 0.55
SSBP1-206ENST00000467681 MAP2P11137 1827 aaKnown RBP18.47■□□□□ 0.55
SSBP1-206ENST00000467681 ZNF316A6NFI3 1004 aaPredicted RBP18.47■□□□□ 0.55
SSBP1-206ENST00000467681 EXOC5O00471 708 aa18.47■□□□□ 0.55
SSBP1-206ENST00000467681 IL2RBP14784 551 aa18.47■□□□□ 0.55
SSBP1-206ENST00000467681 UPF1Q92900 1129 aaKnown RBP eCLIP18.47■□□□□ 0.55
SSBP1-206ENST00000467681 DDB1Q16531 1140 aa18.46■□□□□ 0.55
SSBP1-206ENST00000467681 EIF4A2Q14240 407 aaKnown RBP18.45■□□□□ 0.54
SSBP1-206ENST00000467681 EYA1Q99502 592 aa18.45■□□□□ 0.54
SSBP1-206ENST00000467681 PEAK1Q9H792 1746 aa18.44■□□□□ 0.54
SSBP1-206ENST00000467681 SMG6Q86US8 1419 aaKnown RBP18.44■□□□□ 0.54
SSBP1-206ENST00000467681 ANKRD26Q9UPS8 1709 aa18.43■□□□□ 0.54
SSBP1-206ENST00000467681 DISP2A7MBM2 1401 aa18.43■□□□□ 0.54
SSBP1-206ENST00000467681 FAM182BQ5T319 152 aa18.43■□□□□ 0.54
SSBP1-206ENST00000467681 FAM196AQ6ZSG2 479 aa18.43■□□□□ 0.54
SSBP1-206ENST00000467681 USHBP1Q8N6Y0 703 aa18.43■□□□□ 0.54
SSBP1-206ENST00000467681 THSD7AQ9UPZ6 1657 aa18.42■□□□□ 0.54
SSBP1-206ENST00000467681 CCDC125Q86Z20 511 aa18.42■□□□□ 0.54
SSBP1-206ENST00000467681 IL13P35225 146 aa18.41■□□□□ 0.54
SSBP1-206ENST00000467681 MARCH10Q8NA82 808 aaPredicted RBP18.41■□□□□ 0.54
SSBP1-206ENST00000467681 BRWD3Q6RI45 1802 aa18.4■□□□□ 0.54
SSBP1-206ENST00000467681 PPP2R1AP30153 589 aa18.4■□□□□ 0.54
SSBP1-206ENST00000467681 RAPGEF4Q8WZA2 1011 aa18.4■□□□□ 0.54
SSBP1-206ENST00000467681 ZCRB1Q8TBF4 217 aaKnown RBP18.39■□□□□ 0.53
SSBP1-206ENST00000467681 TATP17735 454 aaPredicted RBP18.38■□□□□ 0.53
SSBP1-206ENST00000467681 RALBP1Q15311 655 aa18.37■□□□□ 0.53
SSBP1-206ENST00000467681 DIAPH1O60610 1272 aaKnown RBP18.36■□□□□ 0.53
SSBP1-206ENST00000467681 IGSF1Q8N6C5 1336 aa18.36■□□□□ 0.53
SSBP1-206ENST00000467681 PARD3Q8TEW0 1356 aa18.35■□□□□ 0.53
SSBP1-206ENST00000467681 DDX54Q8TDD1 881 aaKnown RBP18.35■□□□□ 0.53
SSBP1-206ENST00000467681 NCAPD2Q15021 1401 aa18.34■□□□□ 0.53
SSBP1-206ENST00000467681 TRIM37O94972 964 aa18.34■□□□□ 0.53
SSBP1-206ENST00000467681 CFAP53Q96M91 514 aa18.34■□□□□ 0.53
SSBP1-206ENST00000467681 RGPD2P0DJD1 1756 aa18.33■□□□□ 0.53
SSBP1-206ENST00000467681 PARP4Q9UKK3 1724 aaKnown RBP18.33■□□□□ 0.52
SSBP1-206ENST00000467681 SF3B2Q13435 895 aaKnown RBP18.33■□□□□ 0.52
SSBP1-206ENST00000467681 SULT6B1Q6IMI4 303 aa18.33■□□□□ 0.52
SSBP1-206ENST00000467681 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.33■□□□□ 0.522e-7■■□□□ 12.8
SSBP1-206ENST00000467681 FAM208AQ9UK61 1670 aaKnown RBP18.33■□□□□ 0.52
SSBP1-206ENST00000467681 MEGF6O75095 1541 aa18.32■□□□□ 0.52
SSBP1-206ENST00000467681 BCL9O00512 1426 aa18.32■□□□□ 0.52
SSBP1-206ENST00000467681 TNS2Q63HR2 1409 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms