RNA–Protein interactions for RNA: ENST00000464423.1

UFM1-204, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 3

Gene UFM1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-204ENST00000464423 COL18A1P39060 1754 aa24.37■■□□□ 1.49
UFM1-204ENST00000464423 COL5A2P05997 1499 aaPredicted RBP24.37■■□□□ 1.49
UFM1-204ENST00000464423 FAM98CQ17RN3 349 aaKnown RBP24.36■■□□□ 1.49
UFM1-204ENST00000464423 USP35Q9P2H5 1018 aa24.35■■□□□ 1.49
UFM1-204ENST00000464423 SPATA31A1Q5TZJ5 1347 aa24.35■■□□□ 1.49
UFM1-204ENST00000464423 SEPT12Q8IYM1 358 aa24.34■■□□□ 1.49
UFM1-204ENST00000464423 ONECUT3O60422 494 aaPredicted RBP24.33■■□□□ 1.49
UFM1-204ENST00000464423 WASHC2AQ641Q2 1341 aa24.32■■□□□ 1.48
UFM1-204ENST00000464423 KIF20BQ96Q89 1820 aa24.31■■□□□ 1.48
UFM1-204ENST00000464423 CCDC7Q96M83 1385 aa24.3■■□□□ 1.48
UFM1-204ENST00000464423 A0A0G2JS52 829 aa24.3■■□□□ 1.48
UFM1-204ENST00000464423 MYT1Q01538 1121 aa24.3■■□□□ 1.48
UFM1-204ENST00000464423 MAP3K19Q56UN5 1328 aa24.3■■□□□ 1.48
UFM1-204ENST00000464423 RRS1Q15050 365 aaKnown RBP24.29■■□□□ 1.48
UFM1-204ENST00000464423 CGNL1Q0VF96 1302 aa24.29■■□□□ 1.48
UFM1-204ENST00000464423 RGPD5Q99666 1765 aa24.29■■□□□ 1.48
UFM1-204ENST00000464423 LTN1O94822 1766 aa24.28■■□□□ 1.48
UFM1-204ENST00000464423 TOM1L2Q6ZVM7 507 aa24.27■■□□□ 1.48
UFM1-204ENST00000464423 WDR17Q8IZU2 1322 aa24.27■■□□□ 1.48
UFM1-204ENST00000464423 CRB1P82279 1406 aa24.27■■□□□ 1.48
UFM1-204ENST00000464423 CSB-PGBD3P0DP91 1061 aa24.26■■□□□ 1.47
UFM1-204ENST00000464423 TCP11L2Q8N4U5 519 aa24.25■■□□□ 1.47
UFM1-204ENST00000464423 ABCC6O95255 1503 aa24.25■■□□□ 1.47
UFM1-204ENST00000464423 IP6K1Q92551 441 aa24.24■■□□□ 1.47
UFM1-204ENST00000464423 BRWD3Q6RI45 1802 aa24.24■■□□□ 1.47
UFM1-204ENST00000464423 BARGINQ6ZT62 677 aa24.23■■□□□ 1.47
UFM1-204ENST00000464423 ANKRD24Q8TF21 1146 aa24.23■■□□□ 1.47
UFM1-204ENST00000464423 UPF1Q92900 1129 aaKnown RBP eCLIP24.23■■□□□ 1.47
UFM1-204ENST00000464423 THSD7AQ9UPZ6 1657 aa24.23■■□□□ 1.47
UFM1-204ENST00000464423 ERBB3P21860 1342 aa24.22■■□□□ 1.47
UFM1-204ENST00000464423 HOXC9P31274 260 aa24.22■■□□□ 1.47
UFM1-204ENST00000464423 AMPHP49418 695 aa24.22■■□□□ 1.47
UFM1-204ENST00000464423 LTV1Q96GA3 475 aaPredicted RBP24.22■■□□□ 1.47
UFM1-204ENST00000464423 TNNT2P45379 298 aaPredicted RBP24.21■■□□□ 1.47
UFM1-204ENST00000464423 KRT27Q7Z3Y8 459 aa24.21■■□□□ 1.47
UFM1-204ENST00000464423 FAM182BQ5T319 152 aa24.2■■□□□ 1.46
UFM1-204ENST00000464423 KNSTRNQ9Y448 316 aa24.2■■□□□ 1.46
UFM1-204ENST00000464423 BLMP54132 1417 aaPredicted RBP24.19■■□□□ 1.46
UFM1-204ENST00000464423 CARD10Q9BWT7 1032 aa24.19■■□□□ 1.46
UFM1-204ENST00000464423 THRAP3Q9Y2W1 955 aaKnown RBP24.19■■□□□ 1.46
UFM1-204ENST00000464423 EMILIN1Q9Y6C2 1016 aa24.19■■□□□ 1.46
UFM1-204ENST00000464423 PER1O15534 1290 aaPredicted RBP24.18■■□□□ 1.46
UFM1-204ENST00000464423 NLRP2Q9NX02 1062 aa24.18■■□□□ 1.46
UFM1-204ENST00000464423 PEAK1Q9H792 1746 aa24.18■■□□□ 1.46
UFM1-204ENST00000464423 AMER1Q5JTC6 1135 aaPredicted RBP24.17■■□□□ 1.46
UFM1-204ENST00000464423 HSP90AB2PQ58FF8 381 aa24.15■■□□□ 1.46
UFM1-204ENST00000464423 RTL1A6NKG5 1358 aa24.15■■□□□ 1.46
UFM1-204ENST00000464423 PPM1GO15355 546 aaPredicted RBP24.14■■□□□ 1.45
UFM1-204ENST00000464423 POLKQ9UBT6 870 aa24.14■■□□□ 1.45
UFM1-204ENST00000464423 ANKRD26Q9UPS8 1709 aa24.14■■□□□ 1.45
UFM1-204ENST00000464423 NSD2O96028 1365 aa24.13■■□□□ 1.45
UFM1-204ENST00000464423 CNGB1Q14028 1251 aaPredicted RBP24.12■■□□□ 1.45
UFM1-204ENST00000464423 MORC1Q86VD1 984 aa24.12■■□□□ 1.45
UFM1-204ENST00000464423 DISP2A7MBM2 1401 aa24.11■■□□□ 1.45
UFM1-204ENST00000464423 FLT4P35916 1363 aa24.11■■□□□ 1.45
UFM1-204ENST00000464423 ZEB1P37275 1124 aaPredicted RBP24.1■■□□□ 1.45
UFM1-204ENST00000464423 CC2D1BQ5T0F9 858 aaKnown RBP24.1■■□□□ 1.45
UFM1-204ENST00000464423 INSRP06213 1382 aa24.1■■□□□ 1.45
UFM1-204ENST00000464423 PDE3BQ13370 1112 aa24.09■■□□□ 1.45
UFM1-204ENST00000464423 EP400Q96L91 3159 aa24.08■■□□□ 1.45
UFM1-204ENST00000464423 KIF24Q5T7B8 1368 aa24.08■■□□□ 1.45
UFM1-204ENST00000464423 PARP4Q9UKK3 1724 aaKnown RBP24.08■■□□□ 1.45
UFM1-204ENST00000464423 NBPF6Q5VWK0 638 aa24.08■■□□□ 1.45
UFM1-204ENST00000464423 USHBP1Q8N6Y0 703 aa24.08■■□□□ 1.45
UFM1-204ENST00000464423 NBPF4Q96M43 638 aa24.08■■□□□ 1.45
UFM1-204ENST00000464423 LRRC37A3O60309 1634 aa24.08■■□□□ 1.45
UFM1-204ENST00000464423 WNK3Q9BYP7 1800 aa24.07■■□□□ 1.44
UFM1-204ENST00000464423 DDB1Q16531 1140 aa24.07■■□□□ 1.44
UFM1-204ENST00000464423 CDCA7Q9BWT1 371 aaPredicted RBP24.05■■□□□ 1.44
UFM1-204ENST00000464423 RGPD2P0DJD1 1756 aa24.05■■□□□ 1.44
UFM1-204ENST00000464423 MAP2P11137 1827 aaKnown RBP24.05■■□□□ 1.44
UFM1-204ENST00000464423 IL2RBP14784 551 aa24.04■■□□□ 1.44
UFM1-204ENST00000464423 SMG6Q86US8 1419 aaKnown RBP24.03■■□□□ 1.44
UFM1-204ENST00000464423 MARCH10Q8NA82 808 aaPredicted RBP24.03■■□□□ 1.44
UFM1-204ENST00000464423 FAM208AQ9UK61 1670 aaKnown RBP24.02■■□□□ 1.44
UFM1-204ENST00000464423 EXOC5O00471 708 aa24.01■■□□□ 1.43
UFM1-204ENST00000464423 FAM196AQ6ZSG2 479 aa24.01■■□□□ 1.43
UFM1-204ENST00000464423 EIF4A2Q14240 407 aaKnown RBP23.99■■□□□ 1.43
UFM1-204ENST00000464423 CCDC125Q86Z20 511 aa23.99■■□□□ 1.43
UFM1-204ENST00000464423 NPC1L1Q9UHC9 1359 aa23.99■■□□□ 1.43
UFM1-204ENST00000464423 TNS2Q63HR2 1409 aa23.99■■□□□ 1.43
UFM1-204ENST00000464423 TRIM37O94972 964 aa23.98■■□□□ 1.43
UFM1-204ENST00000464423 DEFB132Q7Z7B7 95 aa23.98■■□□□ 1.43
UFM1-204ENST00000464423 MEGF6O75095 1541 aa23.98■■□□□ 1.43
UFM1-204ENST00000464423 EYA1Q99502 592 aa23.97■■□□□ 1.43
UFM1-204ENST00000464423 OVOS2A0A0G2JMS6 1433 aa23.96■■□□□ 1.43
UFM1-204ENST00000464423 MTHFSP49914 203 aa23.95■■□□□ 1.42
UFM1-204ENST00000464423 SF3B2Q13435 895 aaKnown RBP23.94■■□□□ 1.42
UFM1-204ENST00000464423 PTF1AQ7RTS3 328 aa23.94■■□□□ 1.42
UFM1-204ENST00000464423 DDX10Q13206 875 aaKnown RBP23.93■■□□□ 1.42
UFM1-204ENST00000464423 DDX54Q8TDD1 881 aaKnown RBP23.92■■□□□ 1.42
UFM1-204ENST00000464423 RAPGEF4Q8WZA2 1011 aa23.92■■□□□ 1.42
UFM1-204ENST00000464423 NCAPD2Q15021 1401 aa23.92■■□□□ 1.42
UFM1-204ENST00000464423 TATP17735 454 aaPredicted RBP23.9■■□□□ 1.42
UFM1-204ENST00000464423 ZCRB1Q8TBF4 217 aaKnown RBP23.9■■□□□ 1.42
UFM1-204ENST00000464423 TNS1Q9HBL0 1735 aaKnown RBP23.9■■□□□ 1.42
UFM1-204ENST00000464423 EN1Q05925 392 aaPredicted RBP23.89■■□□□ 1.41
UFM1-204ENST00000464423 RGPD1P0DJD0 1748 aa23.89■■□□□ 1.41
UFM1-204ENST00000464423 IL13P35225 146 aa23.88■■□□□ 1.41
UFM1-204ENST00000464423 IGSF1Q8N6C5 1336 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms