RNA–Protein interactions for RNA: ENST00000462324.2

PHGDH-203, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 5

Gene PHGDH, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-203ENST00000462324 RTL1A6NKG5 1358 aa17.79■□□□□ 0.44
PHGDH-203ENST00000462324 PPM1GO15355 546 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-203ENST00000462324 HOXC9P31274 260 aa17.79■□□□□ 0.44
PHGDH-203ENST00000462324 RALBP1Q15311 655 aa17.79■□□□□ 0.44
PHGDH-203ENST00000462324 AXIN2Q9Y2T1 843 aa17.79■□□□□ 0.44
PHGDH-203ENST00000462324 BCL9LQ86UU0 1499 aa17.79■□□□□ 0.44
PHGDH-203ENST00000462324 VPS72Q15906 364 aa17.78■□□□□ 0.44
PHGDH-203ENST00000462324 STRN4Q9NRL3 753 aa17.78■□□□□ 0.44
PHGDH-203ENST00000462324 EMILIN1Q9Y6C2 1016 aa17.78■□□□□ 0.44
PHGDH-203ENST00000462324 ABCC6O95255 1503 aa17.77■□□□□ 0.44
PHGDH-203ENST00000462324 BLMP54132 1417 aaPredicted RBP17.77■□□□□ 0.44
PHGDH-203ENST00000462324 FLT4P35916 1363 aa17.77■□□□□ 0.43
PHGDH-203ENST00000462324 ANKRD26Q9UPS8 1709 aa17.76■□□□□ 0.43
PHGDH-203ENST00000462324 CSB-PGBD3P0DP91 1061 aa17.76■□□□□ 0.43
PHGDH-203ENST00000462324 CCDC9Q9Y3X0 531 aaKnown RBP17.76■□□□□ 0.43
PHGDH-203ENST00000462324 CAMTA1Q9Y6Y1 1673 aa17.75■□□□□ 0.43
PHGDH-203ENST00000462324 MTHFSP49914 203 aa17.75■□□□□ 0.43
PHGDH-203ENST00000462324 POTEAQ6S8J7 498 aa17.75■□□□□ 0.43
PHGDH-203ENST00000462324 ANKRD24Q8TF21 1146 aa17.75■□□□□ 0.43
PHGDH-203ENST00000462324 INSRP06213 1382 aa17.75■□□□□ 0.43
PHGDH-203ENST00000462324 WDR17Q8IZU2 1322 aa17.74■□□□□ 0.43
PHGDH-203ENST00000462324 GJD4Q96KN9 370 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-203ENST00000462324 NWD2Q9ULI1 1742 aa17.73■□□□□ 0.43
PHGDH-203ENST00000462324 RXRBP28702 533 aa17.73■□□□□ 0.43
PHGDH-203ENST00000462324 PPP2R1AP30153 589 aa17.73■□□□□ 0.43
PHGDH-203ENST00000462324 RBM6P78332 1123 aaKnown RBP17.73■□□□□ 0.43
PHGDH-203ENST00000462324 HSP90AB2PQ58FF8 381 aa17.73■□□□□ 0.43
PHGDH-203ENST00000462324 LARP1Q6PKG0 1096 aaKnown RBP17.73■□□□□ 0.43
PHGDH-203ENST00000462324 TOM1L2Q6ZVM7 507 aa17.73■□□□□ 0.43
PHGDH-203ENST00000462324 PARD3Q8TEW0 1356 aa17.73■□□□□ 0.43
PHGDH-203ENST00000462324 COL5A2P05997 1499 aaPredicted RBP17.73■□□□□ 0.43
PHGDH-203ENST00000462324 ERBB3P21860 1342 aa17.72■□□□□ 0.43
PHGDH-203ENST00000462324 ATRNO75882 1429 aa17.72■□□□□ 0.43
PHGDH-203ENST00000462324 LMO7Q8WWI1 1683 aa17.72■□□□□ 0.43
PHGDH-203ENST00000462324 CFAP53Q96M91 514 aa17.72■□□□□ 0.43
PHGDH-203ENST00000462324 SMG6Q86US8 1419 aaKnown RBP17.72■□□□□ 0.43
PHGDH-203ENST00000462324 SPATA31A5Q5VU36 1347 aa17.72■□□□□ 0.43
PHGDH-203ENST00000462324 SPATA31A7Q8IWB4 1347 aa17.72■□□□□ 0.43
PHGDH-203ENST00000462324 ANP32CO43423 234 aa17.71■□□□□ 0.43
PHGDH-203ENST00000462324 LTV1Q96GA3 475 aaPredicted RBP17.71■□□□□ 0.43
PHGDH-203ENST00000462324 CARD10Q9BWT7 1032 aa17.71■□□□□ 0.43
PHGDH-203ENST00000462324 THRAP3Q9Y2W1 955 aaKnown RBP17.71■□□□□ 0.43
PHGDH-203ENST00000462324 CRB1P82279 1406 aa17.71■□□□□ 0.43
PHGDH-203ENST00000462324 COL18A1P39060 1754 aa17.71■□□□□ 0.43
PHGDH-203ENST00000462324 SPATA31A1Q5TZJ5 1347 aa17.71■□□□□ 0.42
PHGDH-203ENST00000462324 PLCH1Q4KWH8 1693 aa17.71■□□□□ 0.42
PHGDH-203ENST00000462324 PRKRIP1Q9H875 184 aaPredicted RBP17.7■□□□□ 0.42
PHGDH-203ENST00000462324 NLRP2Q9NX02 1062 aa17.7■□□□□ 0.42
PHGDH-203ENST00000462324 TCP11L2Q8N4U5 519 aa17.69■□□□□ 0.42
PHGDH-203ENST00000462324 LTN1O94822 1766 aa17.68■□□□□ 0.42
PHGDH-203ENST00000462324 BARGINQ6ZT62 677 aa17.68■□□□□ 0.42
PHGDH-203ENST00000462324 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.68■□□□□ 0.42
PHGDH-203ENST00000462324 USP35Q9P2H5 1018 aa17.68■□□□□ 0.42
PHGDH-203ENST00000462324 MYBBP1AQ9BQG0 1328 aaKnown RBP17.68■□□□□ 0.42
PHGDH-203ENST00000462324 EIF4A2Q14240 407 aaKnown RBP17.67■□□□□ 0.42
PHGDH-203ENST00000462324 CDCA7Q9BWT1 371 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-203ENST00000462324 CDK12Q9NYV4 1490 aaPredicted RBP17.67■□□□□ 0.42
PHGDH-203ENST00000462324 ONECUT3O60422 494 aaPredicted RBP17.66■□□□□ 0.42
PHGDH-203ENST00000462324 DIAPH1O60610 1272 aaKnown RBP17.66■□□□□ 0.42
PHGDH-203ENST00000462324 MAP2P11137 1827 aaKnown RBP17.65■□□□□ 0.42
PHGDH-203ENST00000462324 NRAPQ86VF7 1730 aa17.65■□□□□ 0.42
PHGDH-203ENST00000462324 NBPF6Q5VWK0 638 aa17.65■□□□□ 0.42
PHGDH-203ENST00000462324 NBPF4Q96M43 638 aa17.65■□□□□ 0.42
PHGDH-203ENST00000462324 NUDCQ9Y266 331 aa17.65■□□□□ 0.42
PHGDH-203ENST00000462324 IL13P35225 146 aa17.64■□□□□ 0.41
PHGDH-203ENST00000462324 PEAK1Q9H792 1746 aa17.64■□□□□ 0.41
PHGDH-203ENST00000462324 FAM98CQ17RN3 349 aaKnown RBP17.63■□□□□ 0.41
PHGDH-203ENST00000462324 EYA1Q99502 592 aa17.63■□□□□ 0.41
PHGDH-203ENST00000462324 A0A0G2JS52 829 aa17.61■□□□□ 0.41
PHGDH-203ENST00000462324 IL2RBP14784 551 aa17.61■□□□□ 0.41
PHGDH-203ENST00000462324 MYT1Q01538 1121 aa17.61■□□□□ 0.41
PHGDH-203ENST00000462324 SEPT12Q8IYM1 358 aa17.6■□□□□ 0.41
PHGDH-203ENST00000462324 RAPGEF4Q8WZA2 1011 aa17.6■□□□□ 0.41
PHGDH-203ENST00000462324 RGPD5Q99666 1765 aa17.59■□□□□ 0.41
PHGDH-203ENST00000462324 IGSF1Q8N6C5 1336 aa17.59■□□□□ 0.41
PHGDH-203ENST00000462324 DIEXFQ68CQ4 756 aaKnown RBP17.59■□□□□ 0.41
PHGDH-203ENST00000462324 GLI3P10071 1580 aa17.58■□□□□ 0.41
PHGDH-203ENST00000462324 EXOC5O00471 708 aa17.58■□□□□ 0.4
PHGDH-203ENST00000462324 TATP17735 454 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-203ENST00000462324 FAM208AQ9UK61 1670 aaKnown RBP17.58■□□□□ 0.4
PHGDH-203ENST00000462324 U2SURPO15042 1029 aaKnown RBP17.57■□□□□ 0.4
PHGDH-203ENST00000462324 USHBP1Q8N6Y0 703 aa17.57■□□□□ 0.4
PHGDH-203ENST00000462324 PDE3BQ13370 1112 aa17.56■□□□□ 0.4
PHGDH-203ENST00000462324 DDB1Q16531 1140 aa17.56■□□□□ 0.4
PHGDH-203ENST00000462324 SULT6B1Q6IMI4 303 aa17.56■□□□□ 0.4
PHGDH-203ENST00000462324 COL3A1P02461 1466 aaPredicted RBP17.55■□□□□ 0.4
PHGDH-203ENST00000462324 NCAPD2Q15021 1401 aa17.55■□□□□ 0.4
PHGDH-203ENST00000462324 U2AF1L5P0DN76 240 aaPredicted RBP17.54■□□□□ 0.4
PHGDH-203ENST00000462324 U2AF1Q01081 240 aaKnown RBP eCLIP17.54■□□□□ 0.4
PHGDH-203ENST00000462324 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.54■□□□□ 0.4
PHGDH-203ENST00000462324 DISP2A7MBM2 1401 aa17.54■□□□□ 0.4
PHGDH-203ENST00000462324 PLEKHG2Q9H7P9 1386 aa17.53■□□□□ 0.4
PHGDH-203ENST00000462324 FCHSD2O94868 740 aa17.53■□□□□ 0.4
PHGDH-203ENST00000462324 KRT27Q7Z3Y8 459 aa17.53■□□□□ 0.4
PHGDH-203ENST00000462324 ZCRB1Q8TBF4 217 aaKnown RBP17.53■□□□□ 0.4
PHGDH-203ENST00000462324 PNNQ9H307 717 aaKnown RBP17.53■□□□□ 0.4
PHGDH-203ENST00000462324 SPG7Q9UQ90 795 aa17.53■□□□□ 0.4
PHGDH-203ENST00000462324 RGS12O14924 1447 aa17.53■□□□□ 0.4
PHGDH-203ENST00000462324 KDRP35968 1356 aa17.52■□□□□ 0.39
PHGDH-203ENST00000462324 HMOX1P09601 288 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms