RNA–Protein interactions for RNA: ENST00000462129.1

RER1-206, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-206ENST00000462129 SLC24A1O60721 1099 aa25.18■■□□□ 1.62
RER1-206ENST00000462129 RGPD3A6NKT7 1758 aaPredicted RBP25.18■■□□□ 1.62
RER1-206ENST00000462129 RGPD4Q7Z3J3 1758 aa25.18■■□□□ 1.62
RER1-206ENST00000462129 CABP2Q9NPB3 220 aa25.16■■□□□ 1.62
RER1-206ENST00000462129 DDB1Q16531 1140 aa25.15■■□□□ 1.62
RER1-206ENST00000462129 ANO8Q9HCE9 1232 aaPredicted RBP25.15■■□□□ 1.62
RER1-206ENST00000462129 BRD4O60885 1362 aaPredicted RBP25.15■■□□□ 1.62
RER1-206ENST00000462129 AATKQ6ZMQ8 1374 aa25.14■■□□□ 1.61
RER1-206ENST00000462129 SBF2Q86WG5 1849 aa25.14■■□□□ 1.61
RER1-206ENST00000462129 USP6P35125 1406 aa25.13■■□□□ 1.61
RER1-206ENST00000462129 SLIT3O75094 1523 aa25.13■■□□□ 1.61
RER1-206ENST00000462129 ST20-MTHFSA0A0A6YYL1 179 aa25.13■■□□□ 1.61
RER1-206ENST00000462129 NLRP6P59044 892 aa25.13■■□□□ 1.61
RER1-206ENST00000462129 TOM1L2Q6ZVM7 507 aa25.13■■□□□ 1.61
RER1-206ENST00000462129 CASZ1Q86V15 1759 aa25.13■■□□□ 1.61
RER1-206ENST00000462129 PLSCR1O15162 318 aa25.12■■□□□ 1.61
RER1-206ENST00000462129 EVC2Q86UK5 1308 aa25.11■■□□□ 1.61
RER1-206ENST00000462129 WNK3Q9BYP7 1800 aa25.1■■□□□ 1.61
RER1-206ENST00000462129 SBNO2Q9Y2G9 1366 aa25.1■■□□□ 1.61
RER1-206ENST00000462129 PTF1AQ7RTS3 328 aa25.1■■□□□ 1.61
RER1-206ENST00000462129 BCL11BQ9C0K0 894 aaPredicted RBP25.1■■□□□ 1.61
RER1-206ENST00000462129 CABP1Q9NZU7 370 aa25.09■■□□□ 1.61
RER1-206ENST00000462129 HSPA5P11021 654 aaKnown RBP25.08■■□□□ 1.61
RER1-206ENST00000462129 PIK3C2AO00443 1686 aa25.07■■□□□ 1.6
RER1-206ENST00000462129 TMF1P82094 1093 aa25.07■■□□□ 1.6
RER1-206ENST00000462129 PDGFDQ9GZP0 370 aaPredicted RBP25.07■■□□□ 1.6
RER1-206ENST00000462129 WDR17Q8IZU2 1322 aa25.07■■□□□ 1.6
RER1-206ENST00000462129 COL18A1P39060 1754 aa25.06■■□□□ 1.6
RER1-206ENST00000462129 ZBTB7AO95365 584 aa25.06■■□□□ 1.6
RER1-206ENST00000462129 AKAP12Q02952 1782 aa25.05■■□□□ 1.6
RER1-206ENST00000462129 CPSF1Q10570 1443 aaKnown RBP25.05■■□□□ 1.6
RER1-206ENST00000462129 MYOM1P52179 1685 aa25.05■■□□□ 1.6
RER1-206ENST00000462129 MARCH10Q8NA82 808 aaPredicted RBP25.05■■□□□ 1.6
RER1-206ENST00000462129 AXIN2Q9Y2T1 843 aa25.05■■□□□ 1.6
RER1-206ENST00000462129 CDCA8Q53HL2 280 aa25.03■■□□□ 1.6
RER1-206ENST00000462129 PROM2Q8N271 834 aa25.03■■□□□ 1.6
RER1-206ENST00000462129 CDCA7Q9BWT1 371 aaPredicted RBP25.03■■□□□ 1.6
RER1-206ENST00000462129 BCL9O00512 1426 aa25.03■■□□□ 1.6
RER1-206ENST00000462129 SOX12O15370 315 aa25.01■■□□□ 1.59
RER1-206ENST00000462129 CSB-PGBD3P0DP91 1061 aa25.01■■□□□ 1.59
RER1-206ENST00000462129 TESK2Q96S53 571 aa25■■□□□ 1.59
RER1-206ENST00000462129 STK32BQ9NY57 414 aa25■■□□□ 1.59
RER1-206ENST00000462129 ATF5Q9Y2D1 282 aaPredicted RBP25■■□□□ 1.59
RER1-206ENST00000462129 PTGER2P43116 358 aa24.99■■□□□ 1.59
RER1-206ENST00000462129 TXNRD1Q16881 649 aa24.98■■□□□ 1.59
RER1-206ENST00000462129 ARHGEF25Q86VW2 580 aa24.98■■□□□ 1.59
RER1-206ENST00000462129 CARD10Q9BWT7 1032 aa24.98■■□□□ 1.59
RER1-206ENST00000462129 RGPD5Q99666 1765 aa24.98■■□□□ 1.59
RER1-206ENST00000462129 KCNH5Q8NCM2 988 aa24.97■■□□□ 1.59
RER1-206ENST00000462129 TTC21BQ7Z4L5 1316 aa24.96■■□□□ 1.59
RER1-206ENST00000462129 SLC15A2Q16348 729 aa24.95■■□□□ 1.58
RER1-206ENST00000462129 EXOC5O00471 708 aa24.94■■□□□ 1.58
RER1-206ENST00000462129 POLR3GLQ9BT43 218 aa24.94■■□□□ 1.58
RER1-206ENST00000462129 FHDC1Q9C0D6 1143 aaPredicted RBP24.94■■□□□ 1.58
RER1-206ENST00000462129 TNS2Q63HR2 1409 aa24.94■■□□□ 1.58
RER1-206ENST00000462129 ZNF784Q8NCA9 323 aaPredicted RBP24.93■■□□□ 1.58
RER1-206ENST00000462129 PUS7Q96PZ0 661 aaKnown RBP24.93■■□□□ 1.58
RER1-206ENST00000462129 CCDC7Q96M83 1385 aa24.93■■□□□ 1.58
RER1-206ENST00000462129 NFAT5O94916 1531 aa24.92■■□□□ 1.58
RER1-206ENST00000462129 SYT17Q9BSW7 474 aa24.91■■□□□ 1.58
RER1-206ENST00000462129 ZNF692Q9BU19 519 aaPredicted RBP24.91■■□□□ 1.58
RER1-206ENST00000462129 MTFR1LQ9H019 292 aa24.91■■□□□ 1.58
RER1-206ENST00000462129 TTC21AQ8NDW8 1320 aa24.9■■□□□ 1.58
RER1-206ENST00000462129 NHSQ6T4R5 1651 aa24.9■■□□□ 1.58
RER1-206ENST00000462129 ABCC6O95255 1503 aa24.88■■□□□ 1.57
RER1-206ENST00000462129 TMC1Q8TDI8 760 aa24.88■■□□□ 1.57
RER1-206ENST00000462129 ACSBG1Q96GR2 724 aa24.88■■□□□ 1.57
RER1-206ENST00000462129 UTRNP46939 3433 aa24.87■■□□□ 1.57
RER1-206ENST00000462129 KTN1Q86UP2 1357 aaKnown RBP24.86■■□□□ 1.57
RER1-206ENST00000462129 SGIP1Q9BQI5 828 aa24.86■■□□□ 1.57
RER1-206ENST00000462129 PAPPAQ13219 1627 aa24.84■■□□□ 1.57
RER1-206ENST00000462129 ARXQ96QS3 562 aa24.83■■□□□ 1.57
RER1-206ENST00000462129 NLRP2Q9NX02 1062 aa24.82■■□□□ 1.56
RER1-206ENST00000462129 MON2Q7Z3U7 1717 aa24.81■■□□□ 1.56
RER1-206ENST00000462129 HDGFL2Q7Z4V5 671 aaPredicted RBP24.81■■□□□ 1.56
RER1-206ENST00000462129 TERF2IPQ9NYB0 399 aa24.81■■□□□ 1.56
RER1-206ENST00000462129 ERBB3P21860 1342 aa24.81■■□□□ 1.56
RER1-206ENST00000462129 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.8■■□□□ 1.56
RER1-206ENST00000462129 BTAF1O14981 1849 aa24.79■■□□□ 1.56
RER1-206ENST00000462129 CHD4Q14839 1912 aa24.79■■□□□ 1.56
RER1-206ENST00000462129 ZNF827Q17R98 1081 aa24.79■■□□□ 1.56
RER1-206ENST00000462129 SENP3-EIF4A1A0A087X0R7 540 aa24.78■■□□□ 1.56
RER1-206ENST00000462129 IL2RBP14784 551 aa24.78■■□□□ 1.56
RER1-206ENST00000462129 KIF7Q2M1P5 1343 aa24.77■■□□□ 1.56
RER1-206ENST00000462129 MAP3K5Q99683 1374 aa24.77■■□□□ 1.56
RER1-206ENST00000462129 USP31Q70CQ4 1352 aa24.76■■□□□ 1.55
RER1-206ENST00000462129 USP54Q70EL1 1684 aa24.75■■□□□ 1.55
RER1-206ENST00000462129 LTN1O94822 1766 aa24.75■■□□□ 1.55
RER1-206ENST00000462129 NME9Q86XW9 330 aa24.75■■□□□ 1.55
RER1-206ENST00000462129 SLC12A5Q9H2X9 1139 aa24.75■■□□□ 1.55
RER1-206ENST00000462129 ANKRD24Q8TF21 1146 aa24.74■■□□□ 1.55
RER1-206ENST00000462129 C1QTNF8P60827 252 aa24.73■■□□□ 1.55
RER1-206ENST00000462129 KLHL34Q8N239 644 aa24.73■■□□□ 1.55
RER1-206ENST00000462129 LRRC4BQ9NT99 713 aa24.73■■□□□ 1.55
RER1-206ENST00000462129 GPR162Q16538 588 aa24.72■■□□□ 1.55
RER1-206ENST00000462129 ANKRD36BQ8N2N9 1353 aa24.71■■□□□ 1.55
RER1-206ENST00000462129 WASHC2AQ641Q2 1341 aa24.7■■□□□ 1.54
RER1-206ENST00000462129 CD163L1Q9NR16 1453 aa24.7■■□□□ 1.54
RER1-206ENST00000462129 KAT6BQ8WYB5 2073 aa24.69■■□□□ 1.54
RER1-206ENST00000462129 A0A1W2PP64 1363 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms