RNA–Protein interactions for RNA: ENST00000460100.1

IMP4-207, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 3

Gene IMP4, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-207ENST00000460100 CCDC7Q96M83 1385 aa19.99■□□□□ 0.79
IMP4-207ENST00000460100 LTN1O94822 1766 aa19.99■□□□□ 0.79
IMP4-207ENST00000460100 SPATA31A1Q5TZJ5 1347 aa19.99■□□□□ 0.79
IMP4-207ENST00000460100 RGPD5Q99666 1765 aa19.98■□□□□ 0.79
IMP4-207ENST00000460100 STRN4Q9NRL3 753 aa19.97■□□□□ 0.79
IMP4-207ENST00000460100 CGNL1Q0VF96 1302 aa19.97■□□□□ 0.79
IMP4-207ENST00000460100 EVA1CP58658 441 aa19.96■□□□□ 0.79
IMP4-207ENST00000460100 LARP1Q6PKG0 1096 aaKnown RBP19.96■□□□□ 0.79
IMP4-207ENST00000460100 ZBTB7CA1YPR0 619 aa19.95■□□□□ 0.78
IMP4-207ENST00000460100 CCDC9Q9Y3X0 531 aaKnown RBP19.95■□□□□ 0.78
IMP4-207ENST00000460100 FBLN1P23142 703 aa19.94■□□□□ 0.78
IMP4-207ENST00000460100 MAP3K19Q56UN5 1328 aa19.94■□□□□ 0.78
IMP4-207ENST00000460100 WDR17Q8IZU2 1322 aa19.94■□□□□ 0.78
IMP4-207ENST00000460100 THSD7AQ9UPZ6 1657 aa19.94■□□□□ 0.78
IMP4-207ENST00000460100 CRB1P82279 1406 aa19.93■□□□□ 0.78
IMP4-207ENST00000460100 ANKRD26Q9UPS8 1709 aa19.93■□□□□ 0.78
IMP4-207ENST00000460100 PER1O15534 1290 aaPredicted RBP19.93■□□□□ 0.78
IMP4-207ENST00000460100 IP6K1Q92551 441 aa19.93■□□□□ 0.78
IMP4-207ENST00000460100 FAM98CQ17RN3 349 aaKnown RBP19.92■□□□□ 0.78
IMP4-207ENST00000460100 BARGINQ6ZT62 677 aa19.92■□□□□ 0.78
IMP4-207ENST00000460100 SEPT12Q8IYM1 358 aa19.92■□□□□ 0.78
IMP4-207ENST00000460100 BRWD3Q6RI45 1802 aa19.92■□□□□ 0.78
IMP4-207ENST00000460100 BLMP54132 1417 aaPredicted RBP19.92■□□□□ 0.78
IMP4-207ENST00000460100 ZEB1P37275 1124 aaPredicted RBP19.91■□□□□ 0.78
IMP4-207ENST00000460100 THRAP3Q9Y2W1 955 aaKnown RBP19.91■□□□□ 0.78
IMP4-207ENST00000460100 ERBB3P21860 1342 aa19.91■□□□□ 0.78
IMP4-207ENST00000460100 NSD2O96028 1365 aa19.91■□□□□ 0.78
IMP4-207ENST00000460100 TCP11L2Q8N4U5 519 aa19.9■□□□□ 0.78
IMP4-207ENST00000460100 RTL1A6NKG5 1358 aa19.89■□□□□ 0.77
IMP4-207ENST00000460100 AMER1Q5JTC6 1135 aaPredicted RBP19.89■□□□□ 0.77
IMP4-207ENST00000460100 KIF24Q5T7B8 1368 aa19.89■□□□□ 0.77
IMP4-207ENST00000460100 HOXC9P31274 260 aa19.88■□□□□ 0.77
IMP4-207ENST00000460100 RRS1Q15050 365 aaKnown RBP19.88■□□□□ 0.77
IMP4-207ENST00000460100 CARD10Q9BWT7 1032 aa19.88■□□□□ 0.77
IMP4-207ENST00000460100 KNSTRNQ9Y448 316 aa19.88■□□□□ 0.77
IMP4-207ENST00000460100 PEAK1Q9H792 1746 aa19.88■□□□□ 0.77
IMP4-207ENST00000460100 TOM1L2Q6ZVM7 507 aa19.87■□□□□ 0.77
IMP4-207ENST00000460100 USP35Q9P2H5 1018 aa19.87■□□□□ 0.77
IMP4-207ENST00000460100 ANKRD24Q8TF21 1146 aa19.86■□□□□ 0.77
IMP4-207ENST00000460100 MAP2P11137 1827 aaKnown RBP19.86■□□□□ 0.77
IMP4-207ENST00000460100 AMPHP49418 695 aa19.85■□□□□ 0.77
IMP4-207ENST00000460100 PARP4Q9UKK3 1724 aaKnown RBP19.85■□□□□ 0.77
IMP4-207ENST00000460100 WNK3Q9BYP7 1800 aa19.84■□□□□ 0.77
IMP4-207ENST00000460100 CSB-PGBD3P0DP91 1061 aa19.84■□□□□ 0.77
IMP4-207ENST00000460100 UPF1Q92900 1129 aaKnown RBP eCLIP19.84■□□□□ 0.772e-7■■■■■ 33.4
IMP4-207ENST00000460100 DISP2A7MBM2 1401 aa19.84■□□□□ 0.77
IMP4-207ENST00000460100 NPC1L1Q9UHC9 1359 aa19.83■□□□□ 0.77
IMP4-207ENST00000460100 KRT27Q7Z3Y8 459 aa19.83■□□□□ 0.77
IMP4-207ENST00000460100 POLKQ9UBT6 870 aa19.83■□□□□ 0.77
IMP4-207ENST00000460100 EMILIN1Q9Y6C2 1016 aa19.83■□□□□ 0.77
IMP4-207ENST00000460100 FAM208AQ9UK61 1670 aaKnown RBP19.83■□□□□ 0.76
IMP4-207ENST00000460100 INSRP06213 1382 aa19.83■□□□□ 0.76
IMP4-207ENST00000460100 FLT4P35916 1363 aa19.83■□□□□ 0.76
IMP4-207ENST00000460100 EP400Q96L91 3159 aa19.82■□□□□ 0.76
IMP4-207ENST00000460100 HSP90AB2PQ58FF8 381 aa19.81■□□□□ 0.76
IMP4-207ENST00000460100 SMG6Q86US8 1419 aaKnown RBP19.8■□□□□ 0.76
IMP4-207ENST00000460100 CDCA7Q9BWT1 371 aaPredicted RBP19.8■□□□□ 0.76
IMP4-207ENST00000460100 A0A0G2JS52 829 aa19.79■□□□□ 0.76
IMP4-207ENST00000460100 MYT1Q01538 1121 aa19.79■□□□□ 0.76
IMP4-207ENST00000460100 MORC1Q86VD1 984 aa19.79■□□□□ 0.76
IMP4-207ENST00000460100 NLRP2Q9NX02 1062 aa19.79■□□□□ 0.76
IMP4-207ENST00000460100 LRRC37A3O60309 1634 aa19.79■□□□□ 0.76
IMP4-207ENST00000460100 RGPD2P0DJD1 1756 aa19.78■□□□□ 0.76
IMP4-207ENST00000460100 LTV1Q96GA3 475 aaPredicted RBP19.77■□□□□ 0.76
IMP4-207ENST00000460100 TNNT2P45379 298 aaPredicted RBP19.76■□□□□ 0.75
IMP4-207ENST00000460100 NBPF6Q5VWK0 638 aa19.75■□□□□ 0.75
IMP4-207ENST00000460100 NBPF4Q96M43 638 aa19.75■□□□□ 0.75
IMP4-207ENST00000460100 NCAPD2Q15021 1401 aa19.74■□□□□ 0.75
IMP4-207ENST00000460100 IL2RBP14784 551 aa19.73■□□□□ 0.75
IMP4-207ENST00000460100 PDE3BQ13370 1112 aa19.73■□□□□ 0.75
IMP4-207ENST00000460100 DDB1Q16531 1140 aa19.73■□□□□ 0.75
IMP4-207ENST00000460100 CC2D1BQ5T0F9 858 aaKnown RBP19.73■□□□□ 0.75
IMP4-207ENST00000460100 CCDC125Q86Z20 511 aa19.73■□□□□ 0.75
IMP4-207ENST00000460100 PPM1GO15355 546 aaPredicted RBP19.72■□□□□ 0.75
IMP4-207ENST00000460100 FAM182BQ5T319 152 aa19.72■□□□□ 0.75
IMP4-207ENST00000460100 TNS2Q63HR2 1409 aa19.71■□□□□ 0.75
IMP4-207ENST00000460100 BCL9O00512 1426 aa19.7■□□□□ 0.74
IMP4-207ENST00000460100 EXOC5O00471 708 aa19.7■□□□□ 0.74
IMP4-207ENST00000460100 FAM196AQ6ZSG2 479 aa19.7■□□□□ 0.74
IMP4-207ENST00000460100 EIF4A2Q14240 407 aaKnown RBP19.69■□□□□ 0.74
IMP4-207ENST00000460100 MARCH10Q8NA82 808 aaPredicted RBP19.69■□□□□ 0.74
IMP4-207ENST00000460100 MEGF6O75095 1541 aa19.68■□□□□ 0.74
IMP4-207ENST00000460100 EYA1Q99502 592 aa19.68■□□□□ 0.74
IMP4-207ENST00000460100 OVOS2A0A0G2JMS6 1433 aa19.67■□□□□ 0.74
IMP4-207ENST00000460100 MTHFSP49914 203 aa19.66■□□□□ 0.74
IMP4-207ENST00000460100 USHBP1Q8N6Y0 703 aa19.66■□□□□ 0.74
IMP4-207ENST00000460100 RGPD1P0DJD0 1748 aa19.65■□□□□ 0.74
IMP4-207ENST00000460100 SBF2Q86WG5 1849 aa19.65■□□□□ 0.74
IMP4-207ENST00000460100 SHANK3Q9BYB0 1731 aa19.65■□□□□ 0.74
IMP4-207ENST00000460100 TNS1Q9HBL0 1735 aaKnown RBP19.65■□□□□ 0.74
IMP4-207ENST00000460100 IGSF1Q8N6C5 1336 aa19.64■□□□□ 0.73
IMP4-207ENST00000460100 IL13P35225 146 aa19.63■□□□□ 0.73
IMP4-207ENST00000460100 DDX10Q13206 875 aaKnown RBP19.62■□□□□ 0.73
IMP4-207ENST00000460100 PLEKHG2Q9H7P9 1386 aa19.61■□□□□ 0.73
IMP4-207ENST00000460100 RAPGEF4Q8WZA2 1011 aa19.61■□□□□ 0.73
IMP4-207ENST00000460100 COL3A1P02461 1466 aaPredicted RBP19.6■□□□□ 0.73
IMP4-207ENST00000460100 PARD3Q8TEW0 1356 aa19.6■□□□□ 0.73
IMP4-207ENST00000460100 TRIM37O94972 964 aa19.6■□□□□ 0.73
IMP4-207ENST00000460100 TATP17735 454 aaPredicted RBP19.6■□□□□ 0.73
IMP4-207ENST00000460100 ZCRB1Q8TBF4 217 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms