RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 C11orf95C9JLR9 678 aaPredicted RBP22.23■■□□□ 1.15
CD28-203ENST00000458610 BARGINQ6ZT62 677 aa22.23■■□□□ 1.15
CD28-203ENST00000458610 TOM1L2Q6ZVM7 507 aa22.23■■□□□ 1.15
CD28-203ENST00000458610 PANK3Q9H999 370 aa22.23■■□□□ 1.15
CD28-203ENST00000458610 USP35Q9P2H5 1018 aa22.23■■□□□ 1.15
CD28-203ENST00000458610 AXIN2Q9Y2T1 843 aa22.23■■□□□ 1.15
CD28-203ENST00000458610 USP54Q70EL1 1684 aa22.23■■□□□ 1.15
CD28-203ENST00000458610 NSD3Q9BZ95 1437 aa22.23■■□□□ 1.15
CD28-203ENST00000458610 NFAT5O94916 1531 aa22.21■■□□□ 1.15
CD28-203ENST00000458610 WDR17Q8IZU2 1322 aa22.21■■□□□ 1.15
CD28-203ENST00000458610 COL5A2P05997 1499 aaPredicted RBP22.21■■□□□ 1.15
CD28-203ENST00000458610 LMO7Q8WWI1 1683 aa22.2■■□□□ 1.15
CD28-203ENST00000458610 KIF7Q2M1P5 1343 aa22.2■■□□□ 1.14
CD28-203ENST00000458610 CRB1P82279 1406 aa22.2■■□□□ 1.14
CD28-203ENST00000458610 ABCC6O95255 1503 aa22.2■■□□□ 1.14
CD28-203ENST00000458610 AMPHP49418 695 aa22.19■■□□□ 1.14
CD28-203ENST00000458610 KRT27Q7Z3Y8 459 aa22.19■■□□□ 1.14
CD28-203ENST00000458610 IP6K1Q92551 441 aa22.19■■□□□ 1.14
CD28-203ENST00000458610 UPF1Q92900 1129 aaKnown RBP eCLIP22.19■■□□□ 1.14
CD28-203ENST00000458610 MYOM1P52179 1685 aa22.18■■□□□ 1.14
CD28-203ENST00000458610 CDCA7Q9BWT1 371 aaPredicted RBP22.17■■□□□ 1.14
CD28-203ENST00000458610 CARD10Q9BWT7 1032 aa22.17■■□□□ 1.14
CD28-203ENST00000458610 KNSTRNQ9Y448 316 aa22.17■■□□□ 1.14
CD28-203ENST00000458610 CCDC125Q86Z20 511 aa22.16■■□□□ 1.14
CD28-203ENST00000458610 MAP3K19Q56UN5 1328 aa22.15■■□□□ 1.14
CD28-203ENST00000458610 COL18A1P39060 1754 aa22.15■■□□□ 1.14
CD28-203ENST00000458610 BLMP54132 1417 aaPredicted RBP22.14■■□□□ 1.14
CD28-203ENST00000458610 PDE3BQ13370 1112 aa22.14■■□□□ 1.13
CD28-203ENST00000458610 ZEB1P37275 1124 aaPredicted RBP22.13■■□□□ 1.13
CD28-203ENST00000458610 ANKRD24Q8TF21 1146 aa22.13■■□□□ 1.13
CD28-203ENST00000458610 NLRP2Q9NX02 1062 aa22.13■■□□□ 1.13
CD28-203ENST00000458610 CCDC7Q96M83 1385 aa22.12■■□□□ 1.13
CD28-203ENST00000458610 ERBB3P21860 1342 aa22.12■■□□□ 1.13
CD28-203ENST00000458610 HOXC9P31274 260 aa22.12■■□□□ 1.13
CD28-203ENST00000458610 NSD2O96028 1365 aa22.12■■□□□ 1.13
CD28-203ENST00000458610 KIF24Q5T7B8 1368 aa22.12■■□□□ 1.13
CD28-203ENST00000458610 RTL1A6NKG5 1358 aa22.11■■□□□ 1.13
CD28-203ENST00000458610 FBLN1P23142 703 aa22.1■■□□□ 1.13
CD28-203ENST00000458610 RRS1Q15050 365 aaKnown RBP22.1■■□□□ 1.13
CD28-203ENST00000458610 KIF20BQ96Q89 1820 aa22.08■■□□□ 1.13
CD28-203ENST00000458610 SF3B2Q13435 895 aaKnown RBP22.08■■□□□ 1.13
CD28-203ENST00000458610 LTV1Q96GA3 475 aaPredicted RBP22.08■■□□□ 1.13
CD28-203ENST00000458610 WASHC2AQ641Q2 1341 aa22.07■■□□□ 1.12
CD28-203ENST00000458610 DDB1Q16531 1140 aa22.07■■□□□ 1.12
CD28-203ENST00000458610 FAM196AQ6ZSG2 479 aa22.07■■□□□ 1.12
CD28-203ENST00000458610 MORC1Q86VD1 984 aa22.07■■□□□ 1.12
CD28-203ENST00000458610 LTN1O94822 1766 aa22.07■■□□□ 1.12
CD28-203ENST00000458610 THSD7AQ9UPZ6 1657 aa22.06■■□□□ 1.12
CD28-203ENST00000458610 FLT4P35916 1363 aa22.05■■□□□ 1.12
CD28-203ENST00000458610 EXOC5O00471 708 aa22.05■■□□□ 1.12
CD28-203ENST00000458610 SMG6Q86US8 1419 aaKnown RBP22.05■■□□□ 1.12
CD28-203ENST00000458610 PPM1GO15355 546 aaPredicted RBP22.04■■□□□ 1.12
CD28-203ENST00000458610 INSRP06213 1382 aa22.03■■□□□ 1.12
CD28-203ENST00000458610 IL2RBP14784 551 aa22.03■■□□□ 1.12
CD28-203ENST00000458610 RGPD5Q99666 1765 aa22.02■■□□□ 1.12
CD28-203ENST00000458610 BRWD3Q6RI45 1802 aa22.02■■□□□ 1.12
CD28-203ENST00000458610 TNNT2P45379 298 aaPredicted RBP22.02■■□□□ 1.12
CD28-203ENST00000458610 HSP90AB2PQ58FF8 381 aa22.02■■□□□ 1.12
CD28-203ENST00000458610 POLKQ9UBT6 870 aa22.02■■□□□ 1.12
CD28-203ENST00000458610 EMILIN1Q9Y6C2 1016 aa22.02■■□□□ 1.12
CD28-203ENST00000458610 PER1O15534 1290 aaPredicted RBP22.01■■□□□ 1.11
CD28-203ENST00000458610 AMER1Q5JTC6 1135 aaPredicted RBP22.01■■□□□ 1.11
CD28-203ENST00000458610 FAM182BQ5T319 152 aa21.99■■□□□ 1.11
CD28-203ENST00000458610 DISP2A7MBM2 1401 aa21.97■■□□□ 1.11
CD28-203ENST00000458610 NBPF6Q5VWK0 638 aa21.96■■□□□ 1.11
CD28-203ENST00000458610 NBPF4Q96M43 638 aa21.96■■□□□ 1.11
CD28-203ENST00000458610 PARP4Q9UKK3 1724 aaKnown RBP21.96■■□□□ 1.11
CD28-203ENST00000458610 NPC1L1Q9UHC9 1359 aa21.96■■□□□ 1.11
CD28-203ENST00000458610 BAG6P46379 1132 aa21.95■■□□□ 1.1
CD28-203ENST00000458610 FAM208AQ9UK61 1670 aaKnown RBP21.95■■□□□ 1.1
CD28-203ENST00000458610 CC2D1BQ5T0F9 858 aaKnown RBP21.94■■□□□ 1.1
CD28-203ENST00000458610 RAPGEF4Q8WZA2 1011 aa21.94■■□□□ 1.1
CD28-203ENST00000458610 OVOS2A0A0G2JMS6 1433 aa21.94■■□□□ 1.1
CD28-203ENST00000458610 ANKRD26Q9UPS8 1709 aa21.94■■□□□ 1.1
CD28-203ENST00000458610 TRIM37O94972 964 aa21.93■■□□□ 1.1
CD28-203ENST00000458610 MARCH10Q8NA82 808 aaPredicted RBP21.92■■□□□ 1.1
CD28-203ENST00000458610 TATP17735 454 aaPredicted RBP21.91■■□□□ 1.1
CD28-203ENST00000458610 ZCRB1Q8TBF4 217 aaKnown RBP21.9■■□□□ 1.1
CD28-203ENST00000458610 MAP2P11137 1827 aaKnown RBP21.9■■□□□ 1.1
CD28-203ENST00000458610 TNS2Q63HR2 1409 aa21.89■■□□□ 1.1
CD28-203ENST00000458610 PEAK1Q9H792 1746 aa21.89■■□□□ 1.09
CD28-203ENST00000458610 BCL9O00512 1426 aa21.89■■□□□ 1.09
CD28-203ENST00000458610 APBA3O96018 575 aa21.88■■□□□ 1.09
CD28-203ENST00000458610 USHBP1Q8N6Y0 703 aa21.88■■□□□ 1.09
CD28-203ENST00000458610 LRRC37A3O60309 1634 aa21.88■■□□□ 1.09
CD28-203ENST00000458610 EIF4A2Q14240 407 aaKnown RBP21.87■■□□□ 1.09
CD28-203ENST00000458610 DEFB132Q7Z7B7 95 aa21.87■■□□□ 1.09
CD28-203ENST00000458610 DDX54Q8TDD1 881 aaKnown RBP21.87■■□□□ 1.09
CD28-203ENST00000458610 EYA1Q99502 592 aa21.87■■□□□ 1.09
CD28-203ENST00000458610 WNK3Q9BYP7 1800 aa21.86■■□□□ 1.09
CD28-203ENST00000458610 MTHFSP49914 203 aa21.86■■□□□ 1.09
CD28-203ENST00000458610 BCL11BQ9C0K0 894 aaPredicted RBP21.86■■□□□ 1.09
CD28-203ENST00000458610 CNGB1Q14028 1251 aaPredicted RBP21.85■■□□□ 1.09
CD28-203ENST00000458610 EN1Q05925 392 aaPredicted RBP21.83■■□□□ 1.09
CD28-203ENST00000458610 RGPD1P0DJD0 1748 aa21.83■■□□□ 1.08
CD28-203ENST00000458610 SPG7Q9UQ90 795 aa21.82■■□□□ 1.08
CD28-203ENST00000458610 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.81■■□□□ 1.08
CD28-203ENST00000458610 PARD3Q8TEW0 1356 aa21.81■■□□□ 1.08
CD28-203ENST00000458610 MEGF6O75095 1541 aa21.8■■□□□ 1.08
CD28-203ENST00000458610 IGSF1Q8N6C5 1336 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms