RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 SMG6Q86US8 1419 aaKnown RBP19.36■□□□□ 0.69
HMGXB4-204ENST00000455359 FBLN1P23142 703 aa19.36■□□□□ 0.69
HMGXB4-204ENST00000455359 EVA1CP58658 441 aa19.35■□□□□ 0.69
HMGXB4-204ENST00000455359 TRPC5Q9UL62 973 aaPredicted RBP19.35■□□□□ 0.69
HMGXB4-204ENST00000455359 AXIN2Q9Y2T1 843 aa19.35■□□□□ 0.69
HMGXB4-204ENST00000455359 EMILIN1Q9Y6C2 1016 aa19.35■□□□□ 0.69
HMGXB4-204ENST00000455359 ANKRD26Q9UPS8 1709 aa19.35■□□□□ 0.69
HMGXB4-204ENST00000455359 INSRP06213 1382 aa19.34■□□□□ 0.69
HMGXB4-204ENST00000455359 VPS72Q15906 364 aa19.34■□□□□ 0.69
HMGXB4-204ENST00000455359 CAMTA1Q9Y6Y1 1673 aa19.33■□□□□ 0.68
HMGXB4-204ENST00000455359 COL5A2P05997 1499 aaPredicted RBP19.32■□□□□ 0.68
HMGXB4-204ENST00000455359 PPM1GO15355 546 aaPredicted RBP19.32■□□□□ 0.68
HMGXB4-204ENST00000455359 PPP2R1AP30153 589 aa19.32■□□□□ 0.68
HMGXB4-204ENST00000455359 PRKRIP1Q9H875 184 aaPredicted RBP19.32■□□□□ 0.68
HMGXB4-204ENST00000455359 ERBB3P21860 1342 aa19.32■□□□□ 0.68
HMGXB4-204ENST00000455359 WDR17Q8IZU2 1322 aa19.32■□□□□ 0.68
HMGXB4-204ENST00000455359 LMO7Q8WWI1 1683 aa19.32■□□□□ 0.68
HMGXB4-204ENST00000455359 MTHFSP49914 203 aa19.31■□□□□ 0.68
HMGXB4-204ENST00000455359 CNGB1Q14028 1251 aaPredicted RBP19.31■□□□□ 0.68
HMGXB4-204ENST00000455359 HSP90AB2PQ58FF8 381 aa19.31■□□□□ 0.68
HMGXB4-204ENST00000455359 QTRT2Q9H974 415 aaKnown RBP19.31■□□□□ 0.68
HMGXB4-204ENST00000455359 RGS17Q9UGC6 210 aaPredicted RBP19.31■□□□□ 0.68
HMGXB4-204ENST00000455359 ATRNO75882 1429 aa19.3■□□□□ 0.68
HMGXB4-204ENST00000455359 ANKRD24Q8TF21 1146 aa19.3■□□□□ 0.68
HMGXB4-204ENST00000455359 STRN4Q9NRL3 753 aa19.3■□□□□ 0.68
HMGXB4-204ENST00000455359 NWD2Q9ULI1 1742 aa19.3■□□□□ 0.68
HMGXB4-204ENST00000455359 CDK12Q9NYV4 1490 aaPredicted RBP19.3■□□□□ 0.68
HMGXB4-204ENST00000455359 ANP32CO43423 234 aa19.29■□□□□ 0.68
HMGXB4-204ENST00000455359 CSB-PGBD3P0DP91 1061 aa19.29■□□□□ 0.68
HMGXB4-204ENST00000455359 MYBBP1AQ9BQG0 1328 aaKnown RBP19.29■□□□□ 0.68
HMGXB4-204ENST00000455359 COL18A1P39060 1754 aa19.28■□□□□ 0.68
HMGXB4-204ENST00000455359 GJD4Q96KN9 370 aaPredicted RBP19.28■□□□□ 0.68
HMGXB4-204ENST00000455359 CFAP53Q96M91 514 aa19.28■□□□□ 0.68
HMGXB4-204ENST00000455359 SPATA31A5Q5VU36 1347 aa19.28■□□□□ 0.68
HMGXB4-204ENST00000455359 SPATA31A7Q8IWB4 1347 aa19.28■□□□□ 0.68
HMGXB4-204ENST00000455359 LARP1Q6PKG0 1096 aaKnown RBP19.27■□□□□ 0.68
HMGXB4-204ENST00000455359 CARD10Q9BWT7 1032 aa19.27■□□□□ 0.68
HMGXB4-204ENST00000455359 THRAP3Q9Y2W1 955 aaKnown RBP19.27■□□□□ 0.68
HMGXB4-204ENST00000455359 CRB1P82279 1406 aa19.27■□□□□ 0.68
HMGXB4-204ENST00000455359 RBM6P78332 1123 aaKnown RBP19.26■□□□□ 0.67
HMGXB4-204ENST00000455359 TOM1L2Q6ZVM7 507 aa19.26■□□□□ 0.67
HMGXB4-204ENST00000455359 SPATA31A1Q5TZJ5 1347 aa19.26■□□□□ 0.67
HMGXB4-204ENST00000455359 PLCH1Q4KWH8 1693 aa19.26■□□□□ 0.67
HMGXB4-204ENST00000455359 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.25■□□□□ 0.67
HMGXB4-204ENST00000455359 RXRBP28702 533 aa19.25■□□□□ 0.67
HMGXB4-204ENST00000455359 BARGINQ6ZT62 677 aa19.25■□□□□ 0.67
HMGXB4-204ENST00000455359 TCP11L2Q8N4U5 519 aa19.25■□□□□ 0.67
HMGXB4-204ENST00000455359 LTV1Q96GA3 475 aaPredicted RBP19.25■□□□□ 0.67
HMGXB4-204ENST00000455359 NLRP2Q9NX02 1062 aa19.25■□□□□ 0.67
HMGXB4-204ENST00000455359 CCDC9Q9Y3X0 531 aaKnown RBP19.25■□□□□ 0.67
HMGXB4-204ENST00000455359 EIF4A2Q14240 407 aaKnown RBP19.24■□□□□ 0.67
HMGXB4-204ENST00000455359 POTEAQ6S8J7 498 aa19.24■□□□□ 0.67
HMGXB4-204ENST00000455359 CDCA7Q9BWT1 371 aaPredicted RBP19.24■□□□□ 0.67
HMGXB4-204ENST00000455359 LTN1O94822 1766 aa19.23■□□□□ 0.67
HMGXB4-204ENST00000455359 ONECUT3O60422 494 aaPredicted RBP19.23■□□□□ 0.67
HMGXB4-204ENST00000455359 DIAPH1O60610 1272 aaKnown RBP19.23■□□□□ 0.67
HMGXB4-204ENST00000455359 IL13P35225 146 aa19.23■□□□□ 0.67
HMGXB4-204ENST00000455359 PEAK1Q9H792 1746 aa19.22■□□□□ 0.67
HMGXB4-204ENST00000455359 NRAPQ86VF7 1730 aa19.22■□□□□ 0.67
HMGXB4-204ENST00000455359 NBPF6Q5VWK0 638 aa19.21■□□□□ 0.67
HMGXB4-204ENST00000455359 NBPF4Q96M43 638 aa19.21■□□□□ 0.67
HMGXB4-204ENST00000455359 NUDCQ9Y266 331 aa19.2■□□□□ 0.66
HMGXB4-204ENST00000455359 DIEXFQ68CQ4 756 aaKnown RBP19.19■□□□□ 0.66
HMGXB4-204ENST00000455359 EYA1Q99502 592 aa19.19■□□□□ 0.66
HMGXB4-204ENST00000455359 IGSF1Q8N6C5 1336 aa19.19■□□□□ 0.66
HMGXB4-204ENST00000455359 MAP2P11137 1827 aaKnown RBP19.18■□□□□ 0.66
HMGXB4-204ENST00000455359 USP35Q9P2H5 1018 aa19.18■□□□□ 0.66
HMGXB4-204ENST00000455359 PLEKHG2Q9H7P9 1386 aa19.18■□□□□ 0.66
HMGXB4-204ENST00000455359 NCAPD2Q15021 1401 aa19.17■□□□□ 0.66
HMGXB4-204ENST00000455359 COL3A1P02461 1466 aaPredicted RBP19.17■□□□□ 0.66
HMGXB4-204ENST00000455359 IL2RBP14784 551 aa19.15■□□□□ 0.66
HMGXB4-204ENST00000455359 FAM98CQ17RN3 349 aaKnown RBP19.15■□□□□ 0.66
HMGXB4-204ENST00000455359 FAM208AQ9UK61 1670 aaKnown RBP19.15■□□□□ 0.66
HMGXB4-204ENST00000455359 GLI3P10071 1580 aa19.14■□□□□ 0.65
HMGXB4-204ENST00000455359 KDRP35968 1356 aa19.14■□□□□ 0.65
HMGXB4-204ENST00000455359 RAPGEF4Q8WZA2 1011 aa19.14■□□□□ 0.65
HMGXB4-204ENST00000455359 DISP2A7MBM2 1401 aa19.13■□□□□ 0.65
HMGXB4-204ENST00000455359 SEPT12Q8IYM1 358 aa19.13■□□□□ 0.65
HMGXB4-204ENST00000455359 U2SURPO15042 1029 aaKnown RBP19.11■□□□□ 0.65
HMGXB4-204ENST00000455359 TATP17735 454 aaPredicted RBP19.11■□□□□ 0.65
HMGXB4-204ENST00000455359 SULT6B1Q6IMI4 303 aa19.11■□□□□ 0.65
HMGXB4-204ENST00000455359 USHBP1Q8N6Y0 703 aa19.11■□□□□ 0.65
HMGXB4-204ENST00000455359 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.11■□□□□ 0.651e-6■■■□□ 18.2
HMGXB4-204ENST00000455359 EXOC5O00471 708 aa19.09■□□□□ 0.65
HMGXB4-204ENST00000455359 FCHSD2O94868 740 aa19.09■□□□□ 0.65
HMGXB4-204ENST00000455359 U2AF1L5P0DN76 240 aaPredicted RBP19.09■□□□□ 0.65
HMGXB4-204ENST00000455359 U2AF1Q01081 240 aaKnown RBP eCLIP19.09■□□□□ 0.65
HMGXB4-204ENST00000455359 PNNQ9H307 717 aaKnown RBP19.09■□□□□ 0.65
HMGXB4-204ENST00000455359 RGPD5Q99666 1765 aa19.09■□□□□ 0.65
HMGXB4-204ENST00000455359 A0A0G2JS52 829 aa19.08■□□□□ 0.65
HMGXB4-204ENST00000455359 CCER2I3L3R5 266 aa19.08■□□□□ 0.65
HMGXB4-204ENST00000455359 MYT1Q01538 1121 aa19.08■□□□□ 0.65
HMGXB4-204ENST00000455359 DDB1Q16531 1140 aa19.08■□□□□ 0.65
HMGXB4-204ENST00000455359 AMOTQ4VCS5 1084 aa19.07■□□□□ 0.64
HMGXB4-204ENST00000455359 OVOS2A0A0G2JMS6 1433 aa19.07■□□□□ 0.64
HMGXB4-204ENST00000455359 PDE3BQ13370 1112 aa19.06■□□□□ 0.64
HMGXB4-204ENST00000455359 WDR43Q15061 677 aaKnown RBP eCLIP19.06■□□□□ 0.64
HMGXB4-204ENST00000455359 AEBP1Q8IUX7 1158 aa19.06■□□□□ 0.64
HMGXB4-204ENST00000455359 ZCRB1Q8TBF4 217 aaKnown RBP19.06■□□□□ 0.64
HMGXB4-204ENST00000455359 MRS2Q9HD23 443 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms