RNA–Protein interactions for RNA: ENST00000452859.6

SNX11-203, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-203ENST00000452859 SPATA31A1Q5TZJ5 1347 aa26.82■■□□□ 1.88
SNX11-203ENST00000452859 COL5A2P05997 1499 aaPredicted RBP26.81■■□□□ 1.88
SNX11-203ENST00000452859 FAM98CQ17RN3 349 aaKnown RBP26.81■■□□□ 1.88
SNX11-203ENST00000452859 LARP1Q6PKG0 1096 aaKnown RBP26.81■■□□□ 1.88
SNX11-203ENST00000452859 SEPT12Q8IYM1 358 aa26.81■■□□□ 1.88
SNX11-203ENST00000452859 PANK3Q9H999 370 aa26.81■■□□□ 1.88
SNX11-203ENST00000452859 KIF7Q2M1P5 1343 aa26.8■■□□□ 1.88
SNX11-203ENST00000452859 USP35Q9P2H5 1018 aa26.79■■□□□ 1.88
SNX11-203ENST00000452859 AXIN2Q9Y2T1 843 aa26.79■■□□□ 1.88
SNX11-203ENST00000452859 ABCC6O95255 1503 aa26.78■■□□□ 1.88
SNX11-203ENST00000452859 CSB-PGBD3P0DP91 1061 aa26.77■■□□□ 1.88
SNX11-203ENST00000452859 TOM1L2Q6ZVM7 507 aa26.77■■□□□ 1.88
SNX11-203ENST00000452859 COL18A1P39060 1754 aa26.77■■□□□ 1.88
SNX11-203ENST00000452859 TCP11L2Q8N4U5 519 aa26.76■■□□□ 1.87
SNX11-203ENST00000452859 THRAP3Q9Y2W1 955 aaKnown RBP26.76■■□□□ 1.87
SNX11-203ENST00000452859 CRB1P82279 1406 aa26.76■■□□□ 1.87
SNX11-203ENST00000452859 WDR17Q8IZU2 1322 aa26.76■■□□□ 1.87
SNX11-203ENST00000452859 KIF20BQ96Q89 1820 aa26.74■■□□□ 1.87
SNX11-203ENST00000452859 BARGINQ6ZT62 677 aa26.74■■□□□ 1.87
SNX11-203ENST00000452859 AMPHP49418 695 aa26.73■■□□□ 1.87
SNX11-203ENST00000452859 IP6K1Q92551 441 aa26.72■■□□□ 1.87
SNX11-203ENST00000452859 KRT27Q7Z3Y8 459 aa26.72■■□□□ 1.87
SNX11-203ENST00000452859 KNSTRNQ9Y448 316 aa26.72■■□□□ 1.87
SNX11-203ENST00000452859 LTN1O94822 1766 aa26.71■■□□□ 1.87
SNX11-203ENST00000452859 MAP3K19Q56UN5 1328 aa26.7■■□□□ 1.87
SNX11-203ENST00000452859 CCDC7Q96M83 1385 aa26.7■■□□□ 1.86
SNX11-203ENST00000452859 BLMP54132 1417 aaPredicted RBP26.7■■□□□ 1.86
SNX11-203ENST00000452859 UPF1Q92900 1129 aaKnown RBP eCLIP26.69■■□□□ 1.863e-10■■■■□ 23.4
SNX11-203ENST00000452859 FBLN1P23142 703 aa26.68■■□□□ 1.86
SNX11-203ENST00000452859 CARD10Q9BWT7 1032 aa26.68■■□□□ 1.86
SNX11-203ENST00000452859 ERBB3P21860 1342 aa26.68■■□□□ 1.86
SNX11-203ENST00000452859 ANKRD24Q8TF21 1146 aa26.68■■□□□ 1.86
SNX11-203ENST00000452859 RGPD5Q99666 1765 aa26.68■■□□□ 1.86
SNX11-203ENST00000452859 RRS1Q15050 365 aaKnown RBP26.67■■□□□ 1.86
SNX11-203ENST00000452859 WASHC2AQ641Q2 1341 aa26.67■■□□□ 1.86
SNX11-203ENST00000452859 NSD2O96028 1365 aa26.66■■□□□ 1.86
SNX11-203ENST00000452859 HOXC9P31274 260 aa26.66■■□□□ 1.86
SNX11-203ENST00000452859 RTL1A6NKG5 1358 aa26.66■■□□□ 1.86
SNX11-203ENST00000452859 CDCA7Q9BWT1 371 aaPredicted RBP26.65■■□□□ 1.86
SNX11-203ENST00000452859 NLRP2Q9NX02 1062 aa26.65■■□□□ 1.86
SNX11-203ENST00000452859 THSD7AQ9UPZ6 1657 aa26.64■■□□□ 1.86
SNX11-203ENST00000452859 KIF24Q5T7B8 1368 aa26.64■■□□□ 1.85
SNX11-203ENST00000452859 BRWD3Q6RI45 1802 aa26.63■■□□□ 1.85
SNX11-203ENST00000452859 PDE3BQ13370 1112 aa26.63■■□□□ 1.85
SNX11-203ENST00000452859 LTV1Q96GA3 475 aaPredicted RBP26.62■■□□□ 1.85
SNX11-203ENST00000452859 CCDC125Q86Z20 511 aa26.61■■□□□ 1.85
SNX11-203ENST00000452859 MORC1Q86VD1 984 aa26.6■■□□□ 1.85
SNX11-203ENST00000452859 FLT4P35916 1363 aa26.59■■□□□ 1.85
SNX11-203ENST00000452859 PPM1GO15355 546 aaPredicted RBP26.58■■□□□ 1.85
SNX11-203ENST00000452859 SMG6Q86US8 1419 aaKnown RBP26.58■■□□□ 1.85
SNX11-203ENST00000452859 TNNT2P45379 298 aaPredicted RBP26.57■■□□□ 1.84
SNX11-203ENST00000452859 DDB1Q16531 1140 aa26.57■■□□□ 1.84
SNX11-203ENST00000452859 EMILIN1Q9Y6C2 1016 aa26.57■■□□□ 1.84
SNX11-203ENST00000452859 ANKRD26Q9UPS8 1709 aa26.57■■□□□ 1.84
SNX11-203ENST00000452859 INSRP06213 1382 aa26.56■■□□□ 1.84
SNX11-203ENST00000452859 PER1O15534 1290 aaPredicted RBP26.55■■□□□ 1.84
SNX11-203ENST00000452859 HSP90AB2PQ58FF8 381 aa26.55■■□□□ 1.84
SNX11-203ENST00000452859 AMER1Q5JTC6 1135 aaPredicted RBP26.55■■□□□ 1.84
SNX11-203ENST00000452859 SF3B2Q13435 895 aaKnown RBP26.54■■□□□ 1.84
SNX11-203ENST00000452859 FAM196AQ6ZSG2 479 aa26.54■■□□□ 1.84
SNX11-203ENST00000452859 POLKQ9UBT6 870 aa26.54■■□□□ 1.84
SNX11-203ENST00000452859 FAM208AQ9UK61 1670 aaKnown RBP26.53■■□□□ 1.84
SNX11-203ENST00000452859 EXOC5O00471 708 aa26.53■■□□□ 1.84
SNX11-203ENST00000452859 IL2RBP14784 551 aa26.53■■□□□ 1.84
SNX11-203ENST00000452859 PARP4Q9UKK3 1724 aaKnown RBP26.53■■□□□ 1.84
SNX11-203ENST00000452859 FAM182BQ5T319 152 aa26.52■■□□□ 1.84
SNX11-203ENST00000452859 DISP2A7MBM2 1401 aa26.5■■□□□ 1.83
SNX11-203ENST00000452859 MAP2P11137 1827 aaKnown RBP26.49■■□□□ 1.83
SNX11-203ENST00000452859 PEAK1Q9H792 1746 aa26.48■■□□□ 1.83
SNX11-203ENST00000452859 WNK3Q9BYP7 1800 aa26.48■■□□□ 1.83
SNX11-203ENST00000452859 CC2D1BQ5T0F9 858 aaKnown RBP26.47■■□□□ 1.83
SNX11-203ENST00000452859 NPC1L1Q9UHC9 1359 aa26.47■■□□□ 1.83
SNX11-203ENST00000452859 NBPF6Q5VWK0 638 aa26.47■■□□□ 1.83
SNX11-203ENST00000452859 NBPF4Q96M43 638 aa26.47■■□□□ 1.83
SNX11-203ENST00000452859 LRRC37A3O60309 1634 aa26.45■■□□□ 1.83
SNX11-203ENST00000452859 EP400Q96L91 3159 aa26.44■■□□□ 1.82
SNX11-203ENST00000452859 OVOS2A0A0G2JMS6 1433 aa26.44■■□□□ 1.82
SNX11-203ENST00000452859 RAPGEF4Q8WZA2 1011 aa26.43■■□□□ 1.82
SNX11-203ENST00000452859 TNS2Q63HR2 1409 aa26.42■■□□□ 1.82
SNX11-203ENST00000452859 MARCH10Q8NA82 808 aaPredicted RBP26.41■■□□□ 1.82
SNX11-203ENST00000452859 TRIM37O94972 964 aa26.4■■□□□ 1.82
SNX11-203ENST00000452859 BAG6P46379 1132 aa26.4■■□□□ 1.82
SNX11-203ENST00000452859 CNGB1Q14028 1251 aaPredicted RBP26.4■■□□□ 1.82
SNX11-203ENST00000452859 USHBP1Q8N6Y0 703 aa26.4■■□□□ 1.82
SNX11-203ENST00000452859 TATP17735 454 aaPredicted RBP26.39■■□□□ 1.81
SNX11-203ENST00000452859 RGPD2P0DJD1 1756 aa26.38■■□□□ 1.81
SNX11-203ENST00000452859 EIF4A2Q14240 407 aaKnown RBP26.38■■□□□ 1.81
SNX11-203ENST00000452859 RGPD1P0DJD0 1748 aa26.36■■□□□ 1.81
SNX11-203ENST00000452859 ZCRB1Q8TBF4 217 aaKnown RBP26.36■■□□□ 1.81
SNX11-203ENST00000452859 MTHFSP49914 203 aa26.36■■□□□ 1.81
SNX11-203ENST00000452859 EYA1Q99502 592 aa26.36■■□□□ 1.81
SNX11-203ENST00000452859 BCL9O00512 1426 aa26.35■■□□□ 1.81
SNX11-203ENST00000452859 DEFB132Q7Z7B7 95 aa26.35■■□□□ 1.81
SNX11-203ENST00000452859 DDX54Q8TDD1 881 aaKnown RBP26.34■■□□□ 1.81
SNX11-203ENST00000452859 APBA3O96018 575 aa26.33■■□□□ 1.81
SNX11-203ENST00000452859 MEGF6O75095 1541 aa26.32■■□□□ 1.8
SNX11-203ENST00000452859 BCL11BQ9C0K0 894 aaPredicted RBP26.31■■□□□ 1.8
SNX11-203ENST00000452859 NCAPD2Q15021 1401 aa26.29■■□□□ 1.8
SNX11-203ENST00000452859 EN1Q05925 392 aaPredicted RBP26.28■■□□□ 1.8
SNX11-203ENST00000452859 IGSF1Q8N6C5 1336 aa26.28■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms