RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 ZBTB7CA1YPR0 619 aa17.95■□□□□ 0.46
SNRNP27-203ENST00000450162 STRN4Q9NRL3 753 aa17.95■□□□□ 0.46
SNRNP27-203ENST00000450162 CAMTA1Q9Y6Y1 1673 aa17.95■□□□□ 0.46
SNRNP27-203ENST00000450162 CCDC7Q96M83 1385 aa17.94■□□□□ 0.46
SNRNP27-203ENST00000450162 KNSTRNQ9Y448 316 aa17.94■□□□□ 0.46
SNRNP27-203ENST00000450162 LMO7Q8WWI1 1683 aa17.93■□□□□ 0.46
SNRNP27-203ENST00000450162 NRAPQ86VF7 1730 aa17.93■□□□□ 0.46
SNRNP27-203ENST00000450162 THRAP3Q9Y2W1 955 aaKnown RBP17.93■□□□□ 0.46
SNRNP27-203ENST00000450162 SPATA31A1Q5TZJ5 1347 aa17.93■□□□□ 0.46
SNRNP27-203ENST00000450162 WASHC2AQ641Q2 1341 aa17.93■□□□□ 0.46
SNRNP27-203ENST00000450162 NSD2O96028 1365 aa17.92■□□□□ 0.46
SNRNP27-203ENST00000450162 AXIN2Q9Y2T1 843 aa17.92■□□□□ 0.46
SNRNP27-203ENST00000450162 COL5A2P05997 1499 aaPredicted RBP17.92■□□□□ 0.46
SNRNP27-203ENST00000450162 RGS12O14924 1447 aa17.91■□□□□ 0.46
SNRNP27-203ENST00000450162 IP6K1Q92551 441 aa17.91■□□□□ 0.46
SNRNP27-203ENST00000450162 WDR17Q8IZU2 1322 aa17.91■□□□□ 0.46
SNRNP27-203ENST00000450162 LARP1Q6PKG0 1096 aaKnown RBP17.9■□□□□ 0.46
SNRNP27-203ENST00000450162 BARGINQ6ZT62 677 aa17.9■□□□□ 0.46
SNRNP27-203ENST00000450162 GLI3P10071 1580 aa17.9■□□□□ 0.46
SNRNP27-203ENST00000450162 KIF24Q5T7B8 1368 aa17.9■□□□□ 0.46
SNRNP27-203ENST00000450162 BLMP54132 1417 aaPredicted RBP17.89■□□□□ 0.46
SNRNP27-203ENST00000450162 CRB1P82279 1406 aa17.89■□□□□ 0.46
SNRNP27-203ENST00000450162 COL18A1P39060 1754 aa17.89■□□□□ 0.45
SNRNP27-203ENST00000450162 AMPHP49418 695 aa17.89■□□□□ 0.45
SNRNP27-203ENST00000450162 SEPT12Q8IYM1 358 aa17.89■□□□□ 0.45
SNRNP27-203ENST00000450162 TCP11L2Q8N4U5 519 aa17.89■□□□□ 0.45
SNRNP27-203ENST00000450162 MAP3K19Q56UN5 1328 aa17.89■□□□□ 0.45
SNRNP27-203ENST00000450162 CSB-PGBD3P0DP91 1061 aa17.88■□□□□ 0.45
SNRNP27-203ENST00000450162 FAM98CQ17RN3 349 aaKnown RBP17.88■□□□□ 0.45
SNRNP27-203ENST00000450162 TOM1L2Q6ZVM7 507 aa17.88■□□□□ 0.45
SNRNP27-203ENST00000450162 KIF20BQ96Q89 1820 aa17.88■□□□□ 0.45
SNRNP27-203ENST00000450162 RTL1A6NKG5 1358 aa17.88■□□□□ 0.45
SNRNP27-203ENST00000450162 PER1O15534 1290 aaPredicted RBP17.87■□□□□ 0.45
SNRNP27-203ENST00000450162 CDCA7Q9BWT1 371 aaPredicted RBP17.86■□□□□ 0.45
SNRNP27-203ENST00000450162 CARD10Q9BWT7 1032 aa17.86■□□□□ 0.45
SNRNP27-203ENST00000450162 ERBB3P21860 1342 aa17.86■□□□□ 0.45
SNRNP27-203ENST00000450162 A0A0G2JS52 829 aa17.85■□□□□ 0.45
SNRNP27-203ENST00000450162 HOXC9P31274 260 aa17.85■□□□□ 0.45
SNRNP27-203ENST00000450162 MYT1Q01538 1121 aa17.85■□□□□ 0.45
SNRNP27-203ENST00000450162 USP35Q9P2H5 1018 aa17.85■□□□□ 0.45
SNRNP27-203ENST00000450162 RRS1Q15050 365 aaKnown RBP17.84■□□□□ 0.45
SNRNP27-203ENST00000450162 AMER1Q5JTC6 1135 aaPredicted RBP17.84■□□□□ 0.45
SNRNP27-203ENST00000450162 ANKRD24Q8TF21 1146 aa17.84■□□□□ 0.45
SNRNP27-203ENST00000450162 NPC1L1Q9UHC9 1359 aa17.83■□□□□ 0.45
SNRNP27-203ENST00000450162 FBLN1P23142 703 aa17.83■□□□□ 0.44
SNRNP27-203ENST00000450162 KRT27Q7Z3Y8 459 aa17.83■□□□□ 0.44
SNRNP27-203ENST00000450162 MORC1Q86VD1 984 aa17.83■□□□□ 0.44
SNRNP27-203ENST00000450162 LTN1O94822 1766 aa17.83■□□□□ 0.44
SNRNP27-203ENST00000450162 FLT4P35916 1363 aa17.82■□□□□ 0.44
SNRNP27-203ENST00000450162 INSRP06213 1382 aa17.81■□□□□ 0.44
SNRNP27-203ENST00000450162 NLRP2Q9NX02 1062 aa17.81■□□□□ 0.44
SNRNP27-203ENST00000450162 POLKQ9UBT6 870 aa17.8■□□□□ 0.44
SNRNP27-203ENST00000450162 SMG6Q86US8 1419 aaKnown RBP17.8■□□□□ 0.44
SNRNP27-203ENST00000450162 CCDC125Q86Z20 511 aa17.79■□□□□ 0.44
SNRNP27-203ENST00000450162 ANKRD26Q9UPS8 1709 aa17.78■□□□□ 0.44
SNRNP27-203ENST00000450162 THSD7AQ9UPZ6 1657 aa17.78■□□□□ 0.44
SNRNP27-203ENST00000450162 PDE3BQ13370 1112 aa17.78■□□□□ 0.44
SNRNP27-203ENST00000450162 EMILIN1Q9Y6C2 1016 aa17.78■□□□□ 0.44
SNRNP27-203ENST00000450162 RGPD5Q99666 1765 aa17.78■□□□□ 0.44
SNRNP27-203ENST00000450162 PPM1GO15355 546 aaPredicted RBP17.77■□□□□ 0.44
SNRNP27-203ENST00000450162 TNNT2P45379 298 aaPredicted RBP17.77■□□□□ 0.44
SNRNP27-203ENST00000450162 HSP90AB2PQ58FF8 381 aa17.77■□□□□ 0.44
SNRNP27-203ENST00000450162 UPF1Q92900 1129 aaKnown RBP eCLIP17.77■□□□□ 0.44
SNRNP27-203ENST00000450162 LTV1Q96GA3 475 aaPredicted RBP17.77■□□□□ 0.44
SNRNP27-203ENST00000450162 DDB1Q16531 1140 aa17.76■□□□□ 0.43
SNRNP27-203ENST00000450162 IL2RBP14784 551 aa17.75■□□□□ 0.43
SNRNP27-203ENST00000450162 FAM208AQ9UK61 1670 aaKnown RBP17.74■□□□□ 0.43
SNRNP27-203ENST00000450162 EXOC5O00471 708 aa17.74■□□□□ 0.43
SNRNP27-203ENST00000450162 CC2D1BQ5T0F9 858 aaKnown RBP17.74■□□□□ 0.43
SNRNP27-203ENST00000450162 FAM196AQ6ZSG2 479 aa17.74■□□□□ 0.43
SNRNP27-203ENST00000450162 DISP2A7MBM2 1401 aa17.73■□□□□ 0.43
SNRNP27-203ENST00000450162 MAP2P11137 1827 aaKnown RBP17.72■□□□□ 0.43
SNRNP27-203ENST00000450162 BRWD3Q6RI45 1802 aa17.72■□□□□ 0.43
SNRNP27-203ENST00000450162 NBPF6Q5VWK0 638 aa17.71■□□□□ 0.43
SNRNP27-203ENST00000450162 NBPF4Q96M43 638 aa17.71■□□□□ 0.43
SNRNP27-203ENST00000450162 PARP4Q9UKK3 1724 aaKnown RBP17.71■□□□□ 0.43
SNRNP27-203ENST00000450162 PEAK1Q9H792 1746 aa17.7■□□□□ 0.42
SNRNP27-203ENST00000450162 SF3B2Q13435 895 aaKnown RBP17.69■□□□□ 0.42
SNRNP27-203ENST00000450162 MTHFSP49914 203 aa17.68■□□□□ 0.42
SNRNP27-203ENST00000450162 RAPGEF4Q8WZA2 1011 aa17.68■□□□□ 0.42
SNRNP27-203ENST00000450162 EIF4A2Q14240 407 aaKnown RBP17.67■□□□□ 0.42
SNRNP27-203ENST00000450162 OVOS2A0A0G2JMS6 1433 aa17.66■□□□□ 0.42
SNRNP27-203ENST00000450162 BCL9O00512 1426 aa17.66■□□□□ 0.42
SNRNP27-203ENST00000450162 TNS2Q63HR2 1409 aa17.66■□□□□ 0.42
SNRNP27-203ENST00000450162 TATP17735 454 aaPredicted RBP17.66■□□□□ 0.42
SNRNP27-203ENST00000450162 EYA1Q99502 592 aa17.66■□□□□ 0.42
SNRNP27-203ENST00000450162 PLEKHG2Q9H7P9 1386 aa17.66■□□□□ 0.42
SNRNP27-203ENST00000450162 DDX10Q13206 875 aaKnown RBP17.65■□□□□ 0.42
SNRNP27-203ENST00000450162 FAM182BQ5T319 152 aa17.65■□□□□ 0.42
SNRNP27-203ENST00000450162 CNKSR2Q8WXI2 1034 aa17.65■□□□□ 0.42
SNRNP27-203ENST00000450162 WNK3Q9BYP7 1800 aa17.65■□□□□ 0.42
SNRNP27-203ENST00000450162 NCAPD2Q15021 1401 aa17.64■□□□□ 0.42
SNRNP27-203ENST00000450162 MARCH10Q8NA82 808 aaPredicted RBP17.64■□□□□ 0.41
SNRNP27-203ENST00000450162 ZCRB1Q8TBF4 217 aaKnown RBP17.64■□□□□ 0.41
SNRNP27-203ENST00000450162 LRRC37A3O60309 1634 aa17.64■□□□□ 0.41
SNRNP27-203ENST00000450162 USHBP1Q8N6Y0 703 aa17.63■□□□□ 0.41
SNRNP27-203ENST00000450162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.63■□□□□ 0.411e-6■■■□□ 14.8
SNRNP27-203ENST00000450162 IGSF1Q8N6C5 1336 aa17.63■□□□□ 0.41
SNRNP27-203ENST00000450162 ZNF316A6NFI3 1004 aaPredicted RBP17.62■□□□□ 0.41
SNRNP27-203ENST00000450162 IL13P35225 146 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms