RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 FOXJ1Q92949 421 aa6.02□□□□□ -1.45
PTPN12-208ENST00000447995 PURBQ96QR8 312 aaKnown RBP6.02□□□□□ -1.45
PTPN12-208ENST00000447995 PCDHB15Q9Y5E8 787 aa6.02□□□□□ -1.45
PTPN12-208ENST00000447995 MAP3K1Q13233 1512 aa6.02□□□□□ -1.45
PTPN12-208ENST00000447995 TOPBP1Q92547 1522 aa6.02□□□□□ -1.45
PTPN12-208ENST00000447995 NR3C2P08235 984 aa6.01□□□□□ -1.45
PTPN12-208ENST00000447995 VSIG8P0DPA2 414 aa6.01□□□□□ -1.45
PTPN12-208ENST00000447995 C4orf48Q5BLP8 95 aa6.01□□□□□ -1.45
PTPN12-208ENST00000447995 CDK15Q96Q40 435 aa6.01□□□□□ -1.45
PTPN12-208ENST00000447995 ZBTB3Q9H5J0 574 aa6.01□□□□□ -1.45
PTPN12-208ENST00000447995 ARHGAP35Q9NRY4 1499 aa6.01□□□□□ -1.45
PTPN12-208ENST00000447995 CUL7Q14999 1698 aa6.01□□□□□ -1.45
PTPN12-208ENST00000447995 FHAD1B1AJZ9 1412 aa6□□□□□ -1.45
PTPN12-208ENST00000447995 SCARF1Q14162 830 aa6□□□□□ -1.45
PTPN12-208ENST00000447995 DIXDC1Q155Q3 683 aa6□□□□□ -1.45
PTPN12-208ENST00000447995 CABLES1Q8TDN4 633 aa6□□□□□ -1.45
PTPN12-208ENST00000447995 ZFAND3Q9H8U3 227 aa6□□□□□ -1.45
PTPN12-208ENST00000447995 POLA1P09884 1462 aaPredicted RBP6□□□□□ -1.45
PTPN12-208ENST00000447995 CLSPNQ9HAW4 1339 aa5.99□□□□□ -1.45
PTPN12-208ENST00000447995 EFCAB5A4FU69 1503 aa5.99□□□□□ -1.45
PTPN12-208ENST00000447995 FAM181BA6NEQ2 426 aa5.99□□□□□ -1.45
PTPN12-208ENST00000447995 PRPF38BQ5VTL8 546 aaKnown RBP5.99□□□□□ -1.45
PTPN12-208ENST00000447995 RRBP1Q9P2E9 1410 aaKnown RBP5.99□□□□□ -1.45
PTPN12-208ENST00000447995 TRIM66O15016 1216 aa5.98□□□□□ -1.45
PTPN12-208ENST00000447995 PER1O15534 1290 aaPredicted RBP5.98□□□□□ -1.45
PTPN12-208ENST00000447995 ZIC2O95409 532 aaPredicted RBP5.98□□□□□ -1.45
PTPN12-208ENST00000447995 ITPKCQ96DU7 683 aa5.98□□□□□ -1.45
PTPN12-208ENST00000447995 C1QTNF2Q9BXJ5 285 aa5.98□□□□□ -1.45
PTPN12-208ENST00000447995 NESP48681 1621 aa5.98□□□□□ -1.45
PTPN12-208ENST00000447995 ARID5BQ14865 1188 aa5.97□□□□□ -1.45
PTPN12-208ENST00000447995 RIC3Q7Z5B4 369 aa5.97□□□□□ -1.45
PTPN12-208ENST00000447995 MEIOBQ8N635 442 aa5.97□□□□□ -1.45
PTPN12-208ENST00000447995 LIMD1Q9UGP4 676 aa5.97□□□□□ -1.45
PTPN12-208ENST00000447995 RAD54L2Q9Y4B4 1467 aa5.96□□□□□ -1.45
PTPN12-208ENST00000447995 URB2Q14146 1524 aaKnown RBP5.96□□□□□ -1.46
PTPN12-208ENST00000447995 GRM5P41594 1212 aa5.96□□□□□ -1.46
PTPN12-208ENST00000447995 NR5A1Q13285 461 aa5.96□□□□□ -1.46
PTPN12-208ENST00000447995 QPCTQ16769 361 aa5.96□□□□□ -1.46
PTPN12-208ENST00000447995 CSPP1Q1MSJ5 1256 aa5.96□□□□□ -1.46
PTPN12-208ENST00000447995 C6orf118Q5T5N4 469 aa5.96□□□□□ -1.46
PTPN12-208ENST00000447995 SH3RF1Q7Z6J0 888 aa5.96□□□□□ -1.46
PTPN12-208ENST00000447995 LINC00528Q8N1L1 170 aa5.96□□□□□ -1.46
PTPN12-208ENST00000447995 TIAM1Q13009 1591 aa5.96□□□□□ -1.46
PTPN12-208ENST00000447995 AQRO60306 1485 aaKnown RBP eCLIP5.96□□□□□ -1.462e-7■■□□□ 11.5
PTPN12-208ENST00000447995 WDR97A6NE52 1622 aa5.96□□□□□ -1.46
PTPN12-208ENST00000447995 CCNB3Q8WWL7 1395 aa5.95□□□□□ -1.46
PTPN12-208ENST00000447995 FSHRP23945 695 aa5.95□□□□□ -1.46
PTPN12-208ENST00000447995 TUSC1Q2TAM9 212 aa5.95□□□□□ -1.46
PTPN12-208ENST00000447995 MYSM1Q5VVJ2 828 aa5.95□□□□□ -1.46
PTPN12-208ENST00000447995 FMN1Q68DA7 1419 aa5.95□□□□□ -1.46
PTPN12-208ENST00000447995 BPHLQ86WA6 291 aaPredicted RBP5.95□□□□□ -1.46
PTPN12-208ENST00000447995 FYCO1Q9BQS8 1478 aa5.95□□□□□ -1.46
PTPN12-208ENST00000447995 AGERQ15109 404 aa5.94□□□□□ -1.46
PTPN12-208ENST00000447995 KANK4Q5T7N3 995 aaPredicted RBP5.94□□□□□ -1.46
PTPN12-208ENST00000447995 SH3BP5LQ7L8J4 393 aa5.94□□□□□ -1.46
PTPN12-208ENST00000447995 TRMT44Q8IYL2 757 aaKnown RBP5.94□□□□□ -1.46
PTPN12-208ENST00000447995 MAP4K5Q9Y4K4 846 aa5.94□□□□□ -1.46
PTPN12-208ENST00000447995 ABCA5Q8WWZ7 1642 aa5.94□□□□□ -1.46
PTPN12-208ENST00000447995 GAPVD1Q14C86 1478 aa5.94□□□□□ -1.46
PTPN12-208ENST00000447995 CTTNBP2Q8WZ74 1663 aa5.94□□□□□ -1.46
PTPN12-208ENST00000447995 CASKIN1Q8WXD9 1431 aa5.93□□□□□ -1.46
PTPN12-208ENST00000447995 MAN1A2O60476 641 aa5.93□□□□□ -1.46
PTPN12-208ENST00000447995 LILRB3O75022 631 aa5.93□□□□□ -1.46
PTPN12-208ENST00000447995 PPFIA3O75145 1194 aa5.93□□□□□ -1.46
PTPN12-208ENST00000447995 NBPF14Q5TI25 921 aa5.93□□□□□ -1.46
PTPN12-208ENST00000447995 DIEXFQ68CQ4 756 aaKnown RBP5.93□□□□□ -1.46
PTPN12-208ENST00000447995 AK7Q96M32 723 aa5.93□□□□□ -1.46
PTPN12-208ENST00000447995 DNMT3LQ9UJW3 386 aa5.93□□□□□ -1.46
PTPN12-208ENST00000447995 LRRC9Q6ZRR7 1453 aa5.93□□□□□ -1.46
PTPN12-208ENST00000447995 CFAP43Q8NDM7 1665 aa5.93□□□□□ -1.46
PTPN12-208ENST00000447995 SOS2Q07890 1332 aaPredicted RBP5.93□□□□□ -1.46
PTPN12-208ENST00000447995 TSC1Q92574 1164 aa5.92□□□□□ -1.46
PTPN12-208ENST00000447995 PCF11O94913 1555 aaKnown RBP5.92□□□□□ -1.46
PTPN12-208ENST00000447995 MRC2Q9UBG0 1479 aa5.91□□□□□ -1.46
PTPN12-208ENST00000447995 BMP2P12643 396 aa5.91□□□□□ -1.46
PTPN12-208ENST00000447995 ARMC2Q8NEN0 867 aa5.91□□□□□ -1.46
PTPN12-208ENST00000447995 THOC2Q8NI27 1593 aaKnown RBP5.91□□□□□ -1.46
PTPN12-208ENST00000447995 DHX57Q6P158 1386 aaKnown RBP5.91□□□□□ -1.46
PTPN12-208ENST00000447995 TDRD9Q8NDG6 1382 aaKnown RBP5.91□□□□□ -1.46
PTPN12-208ENST00000447995 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.91□□□□□ -1.46
PTPN12-208ENST00000447995 FHOD3Q2V2M9 1422 aa5.91□□□□□ -1.46
PTPN12-208ENST00000447995 NUTM2BA6NNL0 878 aaPredicted RBP5.9□□□□□ -1.46
PTPN12-208ENST00000447995 NUTM2EB1AL46 878 aaPredicted RBP5.9□□□□□ -1.46
PTPN12-208ENST00000447995 CLK2P49760 499 aaKnown RBP5.9□□□□□ -1.46
PTPN12-208ENST00000447995 PDE4DQ08499 809 aa5.9□□□□□ -1.46
PTPN12-208ENST00000447995 RTL5Q5HYW3 569 aaPredicted RBP5.9□□□□□ -1.46
PTPN12-208ENST00000447995 NUTM2DQ5VT03 806 aaPredicted RBP5.9□□□□□ -1.46
PTPN12-208ENST00000447995 VASH1Q7L8A9 365 aaPredicted RBP5.9□□□□□ -1.46
PTPN12-208ENST00000447995 NUTM2AQ8IVF1 878 aaPredicted RBP5.9□□□□□ -1.46
PTPN12-208ENST00000447995 CCDC116Q8IYX3 515 aa5.9□□□□□ -1.46
PTPN12-208ENST00000447995 HELBQ8NG08 1087 aaPredicted RBP5.9□□□□□ -1.46
PTPN12-208ENST00000447995 KIF21AQ7Z4S6 1674 aa5.9□□□□□ -1.47
PTPN12-208ENST00000447995 SAMD9Q5K651 1589 aa5.89□□□□□ -1.47
PTPN12-208ENST00000447995 TARBP1Q13395 1621 aaKnown RBP5.89□□□□□ -1.47
PTPN12-208ENST00000447995 MAGEB6P1A0A0J9YX57 407 aa5.89□□□□□ -1.47
PTPN12-208ENST00000447995 UPP2O95045 317 aa5.89□□□□□ -1.47
PTPN12-208ENST00000447995 KRT76Q01546 638 aa5.89□□□□□ -1.47
PTPN12-208ENST00000447995 CENPBP07199 599 aaPredicted RBP5.88□□□□□ -1.47
PTPN12-208ENST00000447995 GSK3AP49840 483 aa5.88□□□□□ -1.47
PTPN12-208ENST00000447995 ERFEQ4G0M1 354 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms