RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-208ENST00000447995 AEBP2Q6ZN18 517 aaPredicted RBP17.6■□□□□ 0.41
PTPN12-208ENST00000447995 CHIC1Q5VXU3 224 aa16.64■□□□□ 0.25
PTPN12-208ENST00000447995 SENP3Q9H4L4 574 aaPredicted RBP14.97□□□□□ -0.01
PTPN12-208ENST00000447995 PHF23Q9BUL5 403 aaPredicted RBP14.75□□□□□ -0.05
PTPN12-208ENST00000447995 FOXD1Q16676 465 aa13.97□□□□□ -0.17
PTPN12-208ENST00000447995 PLPPR3Q6T4P5 718 aa13.24□□□□□ -0.29
PTPN12-208ENST00000447995 MSH5O43196 834 aa13.08□□□□□ -0.32
PTPN12-208ENST00000447995 PIAS4Q8N2W9 510 aaPredicted RBP13.04□□□□□ -0.32
PTPN12-208ENST00000447995 PPP6R1Q9UPN7 881 aa13.03□□□□□ -0.32
PTPN12-208ENST00000447995 ADRA2BP18089 450 aa12.97□□□□□ -0.33
PTPN12-208ENST00000447995 POTEDQ86YR6 584 aa12.88□□□□□ -0.35
PTPN12-208ENST00000447995 MAPK8IP2Q13387 824 aaPredicted RBP11.92□□□□□ -0.5
PTPN12-208ENST00000447995 DMRT2Q9Y5R5 561 aa11.89□□□□□ -0.51
PTPN12-208ENST00000447995 SCAF1Q9H7N4 1312 aaKnown RBP11.8□□□□□ -0.52
PTPN12-208ENST00000447995 PPP4R3CPQ6ZMV5 832 aa11.6□□□□□ -0.55
PTPN12-208ENST00000447995 HOXD11P31277 338 aaPredicted RBP11.43□□□□□ -0.58
PTPN12-208ENST00000447995 CNKSR2Q8WXI2 1034 aa11.4□□□□□ -0.58
PTPN12-208ENST00000447995 DCAF8L1A6NGE4 600 aa11.34□□□□□ -0.59
PTPN12-208ENST00000447995 RNF216Q9NWF9 866 aaPredicted RBP11.31□□□□□ -0.6
PTPN12-208ENST00000447995 CACNB1Q02641 598 aaPredicted RBP11.23□□□□□ -0.61
PTPN12-208ENST00000447995 RNF39Q9H2S5 420 aa11.18□□□□□ -0.62
PTPN12-208ENST00000447995 NCBP3Q53F19 620 aaKnown RBP11.1□□□□□ -0.63
PTPN12-208ENST00000447995 DNAJC5BQ9UF47 199 aa11.04□□□□□ -0.64
PTPN12-208ENST00000447995 NPM3O75607 178 aaKnown RBP11□□□□□ -0.65
PTPN12-208ENST00000447995 C1QBPQ07021 282 aaKnown RBP10.98□□□□□ -0.65
PTPN12-208ENST00000447995 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.84□□□□□ -0.671e-6■□□□□ 10.5
PTPN12-208ENST00000447995 KCNA4P22459 653 aa10.75□□□□□ -0.69
PTPN12-208ENST00000447995 U3KPZ7 1027 aaPredicted RBP10.66□□□□□ -0.7
PTPN12-208ENST00000447995 SLC4A2P04920 1241 aa10.53□□□□□ -0.72
PTPN12-208ENST00000447995 SPINK5Q9NQ38 1064 aaPredicted RBP10.51□□□□□ -0.73
PTPN12-208ENST00000447995 CAPN15O75808 1086 aa10.45□□□□□ -0.74
PTPN12-208ENST00000447995 DSG3P32926 999 aa10.45□□□□□ -0.74
PTPN12-208ENST00000447995 APLP2Q06481 763 aa10.3□□□□□ -0.76
PTPN12-208ENST00000447995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.28□□□□□ -0.76
PTPN12-208ENST00000447995 TRHP20396 242 aaPredicted RBP10.28□□□□□ -0.76
PTPN12-208ENST00000447995 HNRNPUL2Q1KMD3 747 aaKnown RBP10.28□□□□□ -0.76
PTPN12-208ENST00000447995 ZNF219Q9P2Y4 722 aaPredicted RBP10.28□□□□□ -0.76
PTPN12-208ENST00000447995 ABCB7O75027 752 aa10.24□□□□□ -0.77
PTPN12-208ENST00000447995 SAMD1Q6SPF0 538 aaPredicted RBP10.24□□□□□ -0.77
PTPN12-208ENST00000447995 MYCNP04198 464 aaPredicted RBP10.17□□□□□ -0.78
PTPN12-208ENST00000447995 SLC4A1APQ9BWU0 796 aaKnown RBP10.11□□□□□ -0.79
PTPN12-208ENST00000447995 POTEHQ6S545 545 aa10.07□□□□□ -0.8
PTPN12-208ENST00000447995 FOXD4L1Q9NU39 408 aa10.05□□□□□ -0.8
PTPN12-208ENST00000447995 POLA2Q14181 598 aa9.98□□□□□ -0.81
PTPN12-208ENST00000447995 ATF5Q9Y2D1 282 aaPredicted RBP9.96□□□□□ -0.82
PTPN12-208ENST00000447995 RBM42Q9BTD8 480 aaKnown RBP9.94□□□□□ -0.82
PTPN12-208ENST00000447995 ZBTB22O15209 634 aa9.91□□□□□ -0.82
PTPN12-208ENST00000447995 ZBTB12Q9Y330 459 aaPredicted RBP9.79□□□□□ -0.84
PTPN12-208ENST00000447995 CHRDL2Q6WN34 429 aa9.76□□□□□ -0.85
PTPN12-208ENST00000447995 OSCARQ8IYS5 282 aa9.73□□□□□ -0.85
PTPN12-208ENST00000447995 ATXN8OSP0DMR3 200 aa9.72□□□□□ -0.85
PTPN12-208ENST00000447995 AKT1S1Q96B36 256 aa9.71□□□□□ -0.86
PTPN12-208ENST00000447995 REM2Q8IYK8 340 aaPredicted RBP9.62□□□□□ -0.87
PTPN12-208ENST00000447995 PITPNM1O00562 1244 aa9.54□□□□□ -0.88
PTPN12-208ENST00000447995 PIP4P2Q8N4L2 257 aa9.54□□□□□ -0.88
PTPN12-208ENST00000447995 FBLN2P98095 1184 aa9.51□□□□□ -0.89
PTPN12-208ENST00000447995 SPDYE2BA6NHP3 402 aa9.5□□□□□ -0.89
PTPN12-208ENST00000447995 SPDYE6P0CI01 402 aa9.5□□□□□ -0.89
PTPN12-208ENST00000447995 MKRN4PQ13434 485 aaPredicted RBP9.5□□□□□ -0.89
PTPN12-208ENST00000447995 SPDYE2Q495Y8 402 aa9.5□□□□□ -0.89
PTPN12-208ENST00000447995 FXR2P51116 673 aaKnown RBP eCLIP9.47□□□□□ -0.89
PTPN12-208ENST00000447995 SP7Q8TDD2 431 aaPredicted RBP9.42□□□□□ -0.9
PTPN12-208ENST00000447995 SSUH2Q9Y2M2 353 aa9.41□□□□□ -0.9
PTPN12-208ENST00000447995 CSRNP3Q8WYN3 585 aa9.37□□□□□ -0.91
PTPN12-208ENST00000447995 ZNF692Q9BU19 519 aaPredicted RBP9.34□□□□□ -0.91
PTPN12-208ENST00000447995 SPDYE1Q8NFV5 336 aaPredicted RBP9.33□□□□□ -0.92
PTPN12-208ENST00000447995 HAX1O00165 279 aa9.3□□□□□ -0.92
PTPN12-208ENST00000447995 CLEC11AQ9Y240 323 aa9.29□□□□□ -0.92
PTPN12-208ENST00000447995 PRKAR2AP13861 404 aaKnown RBP9.27□□□□□ -0.93
PTPN12-208ENST00000447995 EVX2Q03828 476 aa9.25□□□□□ -0.93
PTPN12-208ENST00000447995 PABPN1Q86U42 306 aaKnown RBP eCLIP9.23□□□□□ -0.93
PTPN12-208ENST00000447995 EHMT2Q96KQ7 1210 aa9.2□□□□□ -0.94
PTPN12-208ENST00000447995 C19orf67A6NJJ6 358 aa9.17□□□□□ -0.94
PTPN12-208ENST00000447995 CHADLQ6NUI6 762 aa9.16□□□□□ -0.94
PTPN12-208ENST00000447995 PRR29P0C7W0 189 aa9.13□□□□□ -0.95
PTPN12-208ENST00000447995 GABBR2O75899 941 aa9.02□□□□□ -0.97
PTPN12-208ENST00000447995 FARP1Q9Y4F1 1045 aaPredicted RBP9.01□□□□□ -0.97
PTPN12-208ENST00000447995 SPDYE4A6NLX3 237 aa8.99□□□□□ -0.97
PTPN12-208ENST00000447995 CD44P16070 742 aaKnown RBP8.98□□□□□ -0.97
PTPN12-208ENST00000447995 CREBZFQ9NS37 354 aa8.95□□□□□ -0.98
PTPN12-208ENST00000447995 STAG3Q9UJ98 1225 aa8.93□□□□□ -0.98
PTPN12-208ENST00000447995 ZNF579Q8NAF0 562 aaKnown RBP8.87□□□□□ -0.99
PTPN12-208ENST00000447995 POTEIP0CG38 1075 aa8.86□□□□□ -0.99
PTPN12-208ENST00000447995 ZRANB1Q9UGI0 708 aa8.83□□□□□ -1
PTPN12-208ENST00000447995 CLCN6P51797 869 aa8.82□□□□□ -1
PTPN12-208ENST00000447995 PROM2Q8N271 834 aa8.82□□□□□ -1
PTPN12-208ENST00000447995 LHX8Q68G74 356 aa8.81□□□□□ -1
PTPN12-208ENST00000447995 MNX1P50219 401 aaPredicted RBP8.8□□□□□ -1
PTPN12-208ENST00000447995 GALR2O43603 387 aaPredicted RBP8.75□□□□□ -1.01
PTPN12-208ENST00000447995 NPM1P06748 294 aaKnown RBP eCLIP8.73□□□□□ -1.01
PTPN12-208ENST00000447995 DCBLD2Q96PD2 775 aa8.73□□□□□ -1.01
PTPN12-208ENST00000447995 PHF12Q96QT6 1004 aa8.73□□□□□ -1.01
PTPN12-208ENST00000447995 PAK3O75914 559 aaPredicted RBP8.72□□□□□ -1.01
PTPN12-208ENST00000447995 MS4A3Q96HJ5 214 aa8.63□□□□□ -1.03
PTPN12-208ENST00000447995 TSPYL2Q9H2G4 693 aaPredicted RBP8.59□□□□□ -1.03
PTPN12-208ENST00000447995 CCDC61Q9Y6R9 512 aa8.59□□□□□ -1.03
PTPN12-208ENST00000447995 PELP1Q8IZL8 1130 aaKnown RBP8.58□□□□□ -1.04
PTPN12-208ENST00000447995 POTEB2H3BUK9 544 aa8.56□□□□□ -1.04
PTPN12-208ENST00000447995 ASTLQ6HA08 431 aaPredicted RBP8.56□□□□□ -1.04
PTPN12-208ENST00000447995 ATMINO43313 823 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms