RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 GOLGB1Q14789 3259 aaKnown RBP18.52■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 C11orf95C9JLR9 678 aaPredicted RBP18.52■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 PPARGC1BQ86YN6 1023 aaKnown RBP18.52■□□□□ 0.56
SMAD9-IT1-201ENST00000437983 LMO7Q8WWI1 1683 aa18.51■□□□□ 0.55
SMAD9-IT1-201ENST00000437983 TULP4Q9NRJ4 1543 aa18.51■□□□□ 0.55
SMAD9-IT1-201ENST00000437983 TXNRD1Q16881 649 aa18.51■□□□□ 0.55
SMAD9-IT1-201ENST00000437983 WASLO00401 505 aaPredicted RBP18.5■□□□□ 0.55
SMAD9-IT1-201ENST00000437983 PELP1Q8IZL8 1130 aaKnown RBP18.49■□□□□ 0.55
SMAD9-IT1-201ENST00000437983 MAP3K5Q99683 1374 aa18.49■□□□□ 0.55
SMAD9-IT1-201ENST00000437983 ATP7BP35670 1465 aa18.49■□□□□ 0.55
SMAD9-IT1-201ENST00000437983 TRAK1Q9UPV9 953 aa18.48■□□□□ 0.55
SMAD9-IT1-201ENST00000437983 DDB1Q16531 1140 aa18.47■□□□□ 0.55
SMAD9-IT1-201ENST00000437983 MARCH10Q8NA82 808 aaPredicted RBP18.47■□□□□ 0.55
SMAD9-IT1-201ENST00000437983 LRRC37A3O60309 1634 aa18.47■□□□□ 0.55
SMAD9-IT1-201ENST00000437983 COL5A2P05997 1499 aaPredicted RBP18.46■□□□□ 0.55
SMAD9-IT1-201ENST00000437983 EIF3AQ14152 1382 aaKnown RBP18.46■□□□□ 0.55
SMAD9-IT1-201ENST00000437983 CPDO75976 1380 aa18.45■□□□□ 0.54
SMAD9-IT1-201ENST00000437983 KLHL34Q8N239 644 aa18.45■□□□□ 0.54
SMAD9-IT1-201ENST00000437983 CRB1P82279 1406 aa18.44■□□□□ 0.54
SMAD9-IT1-201ENST00000437983 HSPA6P17066 643 aa18.43■□□□□ 0.54
SMAD9-IT1-201ENST00000437983 NUDT16Q96DE0 195 aaKnown RBP18.43■□□□□ 0.54
SMAD9-IT1-201ENST00000437983 SLC24A1O60721 1099 aa18.42■□□□□ 0.54
SMAD9-IT1-201ENST00000437983 ZBTB7CA1YPR0 619 aa18.41■□□□□ 0.54
SMAD9-IT1-201ENST00000437983 ABTB2Q8N961 1025 aa18.41■□□□□ 0.54
SMAD9-IT1-201ENST00000437983 NLGN2Q8NFZ4 835 aa18.41■□□□□ 0.54
SMAD9-IT1-201ENST00000437983 USP19O94966 1318 aa18.41■□□□□ 0.54
SMAD9-IT1-201ENST00000437983 ADGRB1O14514 1584 aa18.4■□□□□ 0.54
SMAD9-IT1-201ENST00000437983 GCP02774 474 aa18.4■□□□□ 0.54
SMAD9-IT1-201ENST00000437983 YBX3P16989 372 aaKnown RBP eCLIP18.39■□□□□ 0.53
SMAD9-IT1-201ENST00000437983 ACEP12821 1306 aa18.39■□□□□ 0.53
SMAD9-IT1-201ENST00000437983 BCL9O00512 1426 aa18.39■□□□□ 0.53
SMAD9-IT1-201ENST00000437983 ATP10DQ9P241 1426 aa18.39■□□□□ 0.53
SMAD9-IT1-201ENST00000437983 ZNF827Q17R98 1081 aa18.38■□□□□ 0.53
SMAD9-IT1-201ENST00000437983 TOM1L2Q6ZVM7 507 aa18.37■□□□□ 0.53
SMAD9-IT1-201ENST00000437983 AATKQ6ZMQ8 1374 aa18.37■□□□□ 0.53
SMAD9-IT1-201ENST00000437983 POLR3AO14802 1390 aaPredicted RBP18.36■□□□□ 0.53
SMAD9-IT1-201ENST00000437983 ITSN1Q15811 1721 aa18.35■□□□□ 0.53
SMAD9-IT1-201ENST00000437983 MPHOSPH9Q99550 1183 aa18.35■□□□□ 0.53
SMAD9-IT1-201ENST00000437983 PAPPAQ13219 1627 aa18.34■□□□□ 0.53
SMAD9-IT1-201ENST00000437983 AKAP12Q02952 1782 aa18.34■□□□□ 0.53
SMAD9-IT1-201ENST00000437983 ZNF526Q8TF50 670 aaPredicted RBP18.33■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 GPBP1L1Q9HC44 474 aaPredicted RBP18.33■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 NLRP13Q86W25 1043 aa18.32■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 ACSBG1Q96GR2 724 aa18.32■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 CDK19Q9BWU1 502 aa18.32■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 AXIN2Q9Y2T1 843 aa18.32■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 WNK3Q9BYP7 1800 aa18.32■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 LRRC4BQ9NT99 713 aa18.31■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 ZNF219Q9P2Y4 722 aaPredicted RBP18.31■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 GRIN3BO60391 1043 aa18.3■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 CAPN15O75808 1086 aa18.3■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 POLD1P28340 1107 aa18.3■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 WDR17Q8IZU2 1322 aa18.29■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 PLEKHG3A1L390 1219 aa18.29■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 TOPAZ1Q8N9V7 1692 aa18.28■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 EXOC5O00471 708 aa18.28■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 CDCA7Q9BWT1 371 aaPredicted RBP18.28■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 CCDC61Q9Y6R9 512 aa18.28■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 AKT1S1Q96B36 256 aa18.27■□□□□ 0.52
SMAD9-IT1-201ENST00000437983 COL18A1P39060 1754 aa18.27■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 PNPLA7Q6ZV29 1317 aa18.26■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 SLC16A10Q8TF71 515 aa18.26■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 COL24A1Q17RW2 1714 aa18.26■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 NHSQ6T4R5 1651 aa18.25■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 COL13A1Q5TAT6 717 aaPredicted RBP18.25■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 DNAJC5GQ8N7S2 189 aa18.25■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 ADCY9O60503 1353 aa18.25■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 CARD10Q9BWT7 1032 aa18.24■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 KDM2AQ9Y2K7 1162 aa18.24■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 NLRP6P59044 892 aa18.23■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 ARHGEF28Q8N1W1 1705 aaKnown RBP18.23■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 USP6P35125 1406 aa18.22■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 KIF3CO14782 793 aa18.21■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 CSB-PGBD3P0DP91 1061 aa18.21■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 KCNQ4P56696 695 aa18.21■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 SLIT3O75094 1523 aa18.21■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 BTAF1O14981 1849 aa18.21■□□□□ 0.51
SMAD9-IT1-201ENST00000437983 BRD4O60885 1362 aaPredicted RBP18.2■□□□□ 0.5
SMAD9-IT1-201ENST00000437983 TNS2Q63HR2 1409 aa18.2■□□□□ 0.5
SMAD9-IT1-201ENST00000437983 APLP1P51693 650 aa18.19■□□□□ 0.5
SMAD9-IT1-201ENST00000437983 RGPD5Q99666 1765 aa18.19■□□□□ 0.5
SMAD9-IT1-201ENST00000437983 TFCP2L1Q9NZI6 479 aa18.18■□□□□ 0.5
SMAD9-IT1-201ENST00000437983 TUBGCP6Q96RT7 1819 aa18.18■□□□□ 0.5
SMAD9-IT1-201ENST00000437983 QSER1Q2KHR3 1735 aa18.18■□□□□ 0.5
SMAD9-IT1-201ENST00000437983 CPSF1Q10570 1443 aaKnown RBP18.17■□□□□ 0.5
SMAD9-IT1-201ENST00000437983 PPIP5K1Q6PFW1 1433 aa18.17■□□□□ 0.5
SMAD9-IT1-201ENST00000437983 ARHGEF25Q86VW2 580 aa18.17■□□□□ 0.5
SMAD9-IT1-201ENST00000437983 SOX12O15370 315 aa18.16■□□□□ 0.5
SMAD9-IT1-201ENST00000437983 DCAF11Q8TEB1 546 aa18.16■□□□□ 0.5
SMAD9-IT1-201ENST00000437983 MSL1Q68DK7 614 aa18.14■□□□□ 0.49
SMAD9-IT1-201ENST00000437983 TRPM1Q7Z4N2 1603 aa18.13■□□□□ 0.49
SMAD9-IT1-201ENST00000437983 PRELPP51888 382 aa18.13■□□□□ 0.49
SMAD9-IT1-201ENST00000437983 SLC27A3Q5K4L6 730 aa18.13■□□□□ 0.49
SMAD9-IT1-201ENST00000437983 CABP2Q9NPB3 220 aa18.13■□□□□ 0.49
SMAD9-IT1-201ENST00000437983 WWC3Q9ULE0 1092 aa18.13■□□□□ 0.49
SMAD9-IT1-201ENST00000437983 CCDC7Q96M83 1385 aa18.13■□□□□ 0.49
SMAD9-IT1-201ENST00000437983 KAT6BQ8WYB5 2073 aa18.13■□□□□ 0.49
SMAD9-IT1-201ENST00000437983 ABCC6O95255 1503 aa18.13■□□□□ 0.49
SMAD9-IT1-201ENST00000437983 SRPK2P78362 688 aaKnown RBP18.12■□□□□ 0.49
SMAD9-IT1-201ENST00000437983 TNS4Q8IZW8 715 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms