RNA–Protein interactions for RNA: ENST00000433094.1

LINC00494-203, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best)

Gene LINC00494, Length 3,071 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-203ENST00000433094 PLA2R1Q13018 1463 aa12.22□□□□□ -0.45
LINC00494-203ENST00000433094 HNRNPMP52272 730 aaKnown RBP eCLIP12.22□□□□□ -0.45
LINC00494-203ENST00000433094 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
LINC00494-203ENST00000433094 IQGAP2Q13576 1575 aa12.21□□□□□ -0.45
LINC00494-203ENST00000433094 ITSN2Q9NZM3 1697 aa12.21□□□□□ -0.45
LINC00494-203ENST00000433094 USP26Q9BXU7 913 aa12.21□□□□□ -0.45
LINC00494-203ENST00000433094 PYCARDQ9ULZ3 195 aa12.21□□□□□ -0.45
LINC00494-203ENST00000433094 SHROOM2Q13796 1616 aa12.21□□□□□ -0.45
LINC00494-203ENST00000433094 FOXD4L6Q3SYB3 417 aaPredicted RBP12.21□□□□□ -0.46
LINC00494-203ENST00000433094 FOXD4L3Q6VB84 417 aaPredicted RBP12.21□□□□□ -0.46
LINC00494-203ENST00000433094 EIF2AK4Q9P2K8 1649 aaKnown RBP12.21□□□□□ -0.46
LINC00494-203ENST00000433094 ERICH4A6NGS2 130 aa12.2□□□□□ -0.46
LINC00494-203ENST00000433094 CALCOCO1Q9P1Z2 691 aa12.2□□□□□ -0.46
LINC00494-203ENST00000433094 IRX3P78415 501 aaPredicted RBP12.2□□□□□ -0.46
LINC00494-203ENST00000433094 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.2□□□□□ -0.46
LINC00494-203ENST00000433094 CROCC2H7BZ55 1655 aa12.2□□□□□ -0.46
LINC00494-203ENST00000433094 HCLS1P14317 486 aaPredicted RBP12.19□□□□□ -0.46
LINC00494-203ENST00000433094 TMEM132AQ24JP5 1023 aa12.19□□□□□ -0.46
LINC00494-203ENST00000433094 GDPD2Q9HCC8 539 aa12.19□□□□□ -0.46
LINC00494-203ENST00000433094 MORC2Q9Y6X9 1032 aaPredicted RBP12.19□□□□□ -0.46
LINC00494-203ENST00000433094 ADCY10Q96PN6 1610 aa12.19□□□□□ -0.46
LINC00494-203ENST00000433094 TRIM6-TRIM34B2RNG4 842 aa12.19□□□□□ -0.46
LINC00494-203ENST00000433094 KDM4AO75164 1064 aa12.19□□□□□ -0.46
LINC00494-203ENST00000433094 CERS3Q8IU89 383 aa12.19□□□□□ -0.46
LINC00494-203ENST00000433094 CHMP7Q8WUX9 453 aaPredicted RBP12.19□□□□□ -0.46
LINC00494-203ENST00000433094 TRIM34Q9BYJ4 488 aa12.19□□□□□ -0.46
LINC00494-203ENST00000433094 C1orf115Q9H7X2 142 aa12.19□□□□□ -0.46
LINC00494-203ENST00000433094 IFT140Q96RY7 1462 aa12.19□□□□□ -0.46
LINC00494-203ENST00000433094 GADD45BO75293 160 aaPredicted RBP12.18□□□□□ -0.46
LINC00494-203ENST00000433094 U2AF1L5P0DN76 240 aaPredicted RBP12.18□□□□□ -0.46
LINC00494-203ENST00000433094 CAPN2P17655 700 aa12.18□□□□□ -0.46
LINC00494-203ENST00000433094 U2AF1Q01081 240 aaKnown RBP eCLIP12.18□□□□□ -0.46
LINC00494-203ENST00000433094 KRT222Q8N1A0 295 aa12.18□□□□□ -0.46
LINC00494-203ENST00000433094 VGFO15240 615 aaPredicted RBP12.18□□□□□ -0.46
LINC00494-203ENST00000433094 GSPT1P15170 499 aaKnown RBP12.18□□□□□ -0.46
LINC00494-203ENST00000433094 MTHFSP49914 203 aa12.17□□□□□ -0.46
LINC00494-203ENST00000433094 SPC24Q8NBT2 197 aa12.17□□□□□ -0.46
LINC00494-203ENST00000433094 CNKSR2Q8WXI2 1034 aa12.17□□□□□ -0.46
LINC00494-203ENST00000433094 TRERF1Q96PN7 1200 aa12.17□□□□□ -0.46
LINC00494-203ENST00000433094 KCNF1Q9H3M0 494 aa12.17□□□□□ -0.46
LINC00494-203ENST00000433094 BRD1O95696 1058 aa12.17□□□□□ -0.46
LINC00494-203ENST00000433094 NAA30Q147X3 362 aaPredicted RBP12.17□□□□□ -0.46
LINC00494-203ENST00000433094 SYCP1Q15431 976 aa12.17□□□□□ -0.46
LINC00494-203ENST00000433094 CFAP53Q96M91 514 aa12.17□□□□□ -0.46
LINC00494-203ENST00000433094 SHANK2Q9UPX8 1470 aa12.17□□□□□ -0.46
LINC00494-203ENST00000433094 TPM3P06753 285 aa12.17□□□□□ -0.46
LINC00494-203ENST00000433094 KIF18AQ8NI77 898 aa12.17□□□□□ -0.46
LINC00494-203ENST00000433094 TARBP1Q13395 1621 aaKnown RBP12.16□□□□□ -0.46
LINC00494-203ENST00000433094 TULP2O00295 520 aa12.16□□□□□ -0.46
LINC00494-203ENST00000433094 INTS3Q68E01 1043 aaKnown RBP12.16□□□□□ -0.46
LINC00494-203ENST00000433094 AEBP1Q8IUX7 1158 aa12.16□□□□□ -0.46
LINC00494-203ENST00000433094 IQSEC2Q5JU85 1478 aa12.16□□□□□ -0.46
LINC00494-203ENST00000433094 ZFP91Q96JP5 570 aaPredicted RBP12.16□□□□□ -0.46
LINC00494-203ENST00000433094 CFAP74Q9C0B2 1584 aa12.15□□□□□ -0.46
LINC00494-203ENST00000433094 SCAF11Q99590 1463 aaKnown RBP12.15□□□□□ -0.46
LINC00494-203ENST00000433094 ANKRD36BQ8N2N9 1353 aa12.15□□□□□ -0.46
LINC00494-203ENST00000433094 GOLGA6L6A8MZA4 724 aa12.15□□□□□ -0.46
LINC00494-203ENST00000433094 USP48Q86UV5 1035 aa12.15□□□□□ -0.46
LINC00494-203ENST00000433094 PPIP5K1Q6PFW1 1433 aa12.15□□□□□ -0.46
LINC00494-203ENST00000433094 TMX3Q96JJ7 454 aa12.15□□□□□ -0.46
LINC00494-203ENST00000433094 FBXO3Q9UK99 471 aa12.15□□□□□ -0.46
LINC00494-203ENST00000433094 SMARCA5O60264 1052 aaPredicted RBP12.14□□□□□ -0.47
LINC00494-203ENST00000433094 CCDC183Q5T5S1 534 aa12.14□□□□□ -0.47
LINC00494-203ENST00000433094 C16orf45Q96MC5 204 aaPredicted RBP12.14□□□□□ -0.47
LINC00494-203ENST00000433094 SMTNL1A8MU46 457 aa12.14□□□□□ -0.47
LINC00494-203ENST00000433094 ZBTB7BO15156 539 aaPredicted RBP12.14□□□□□ -0.47
LINC00494-203ENST00000433094 NEK4P51957 841 aa12.14□□□□□ -0.47
LINC00494-203ENST00000433094 PLEKHM2Q8IWE5 1019 aa12.14□□□□□ -0.47
LINC00494-203ENST00000433094 TSPYL1Q9H0U9 437 aa12.14□□□□□ -0.47
LINC00494-203ENST00000433094 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
LINC00494-203ENST00000433094 CASC1Q6TDU7 716 aa12.14□□□□□ -0.47
LINC00494-203ENST00000433094 CCDC112Q8NEF3 446 aa12.14□□□□□ -0.47
LINC00494-203ENST00000433094 PLEKHD1A6NEE1 506 aa12.13□□□□□ -0.47
LINC00494-203ENST00000433094 U2SURPO15042 1029 aaKnown RBP12.13□□□□□ -0.47
LINC00494-203ENST00000433094 TNNT1P13805 278 aa12.12□□□□□ -0.47
LINC00494-203ENST00000433094 MX1P20591 662 aa12.12□□□□□ -0.47
LINC00494-203ENST00000433094 NOS1P29475 1434 aa12.12□□□□□ -0.47
LINC00494-203ENST00000433094 TTC22Q5TAA0 569 aa12.12□□□□□ -0.47
LINC00494-203ENST00000433094 SIRT2Q8IXJ6 389 aa12.12□□□□□ -0.47
LINC00494-203ENST00000433094 REC8O95072 547 aa12.12□□□□□ -0.47
LINC00494-203ENST00000433094 RGS22Q8NE09 1264 aa12.12□□□□□ -0.47
LINC00494-203ENST00000433094 IFT57Q9NWB7 429 aa12.12□□□□□ -0.47
LINC00494-203ENST00000433094 AP5Z1O43299 807 aa12.12□□□□□ -0.47
LINC00494-203ENST00000433094 TNNT3P45378 269 aaPredicted RBP12.12□□□□□ -0.47
LINC00494-203ENST00000433094 NOL8Q76FK4 1167 aaKnown RBP12.12□□□□□ -0.47
LINC00494-203ENST00000433094 TEX2Q8IWB9 1127 aa12.12□□□□□ -0.47
LINC00494-203ENST00000433094 RAPGEF6Q8TEU7 1601 aa12.12□□□□□ -0.47
LINC00494-203ENST00000433094 PTGS1P23219 599 aa12.11□□□□□ -0.47
LINC00494-203ENST00000433094 C16orf71Q8IYS4 520 aaPredicted RBP12.11□□□□□ -0.47
LINC00494-203ENST00000433094 PAXBP1Q9Y5B6 917 aa12.11□□□□□ -0.47
LINC00494-203ENST00000433094 ABCC11Q96J66 1382 aa12.1□□□□□ -0.47
LINC00494-203ENST00000433094 TMPOP42166 694 aaKnown RBP12.1□□□□□ -0.47
LINC00494-203ENST00000433094 HNRNPH2P55795 449 aaKnown RBP12.1□□□□□ -0.47
LINC00494-203ENST00000433094 KMT5BQ4FZB7 885 aa12.1□□□□□ -0.47
LINC00494-203ENST00000433094 ZNF397Q8NF99 534 aaPredicted RBP12.1□□□□□ -0.47
LINC00494-203ENST00000433094 FEZ2Q9UHY8 353 aaPredicted RBP12.1□□□□□ -0.47
LINC00494-203ENST00000433094 PBRM1Q86U86 1689 aa12.1□□□□□ -0.47
LINC00494-203ENST00000433094 RNF17Q9BXT8 1623 aaKnown RBP12.1□□□□□ -0.47
LINC00494-203ENST00000433094 SDSP20132 328 aa12.09□□□□□ -0.47
LINC00494-203ENST00000433094 GIMAP6Q6P9H5 292 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms