RNA–Protein interactions for RNA: ENST00000433094.1

LINC00494-203, long intergenic non-protein coding RNA 494, humanhuman

TSL 1 (best)

Gene LINC00494, Length 3,071 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00494-203ENST00000433094 NISCHQ9Y2I1 1504 aa17.96■□□□□ 0.47
LINC00494-203ENST00000433094 HRCP23327 699 aa17.15■□□□□ 0.34
LINC00494-203ENST00000433094 PELP1Q8IZL8 1130 aaKnown RBP17.02■□□□□ 0.32
LINC00494-203ENST00000433094 PPARGC1BQ86YN6 1023 aaKnown RBP16.79■□□□□ 0.28
LINC00494-203ENST00000433094 PCGF6Q9BYE7 350 aa16.69■□□□□ 0.26
LINC00494-203ENST00000433094 MYT1Q01538 1121 aa16.46■□□□□ 0.23
LINC00494-203ENST00000433094 SUPT5HO00267 1087 aaKnown RBP16.42■□□□□ 0.22
LINC00494-203ENST00000433094 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
LINC00494-203ENST00000433094 SHROOM4Q9ULL8 1493 aa16.3■□□□□ 0.2
LINC00494-203ENST00000433094 MYO15BQ96JP2 1530 aa16.29■□□□□ 0.2
LINC00494-203ENST00000433094 CHIC1Q5VXU3 224 aa16.21■□□□□ 0.19
LINC00494-203ENST00000433094 TRIM26Q12899 539 aaPredicted RBP16.05■□□□□ 0.16
LINC00494-203ENST00000433094 ZEB1P37275 1124 aaPredicted RBP16.04■□□□□ 0.16
LINC00494-203ENST00000433094 DCAF1Q9Y4B6 1507 aa16.04■□□□□ 0.16
LINC00494-203ENST00000433094 ACIN1Q9UKV3 1341 aaKnown RBP15.91■□□□□ 0.14
LINC00494-203ENST00000433094 LOC105371045A0A1W2PR82 267 aa15.91■□□□□ 0.14
LINC00494-203ENST00000433094 NEUROD1Q13562 356 aa15.85■□□□□ 0.13
LINC00494-203ENST00000433094 CCDC180Q9P1Z9 1646 aa15.84■□□□□ 0.13
LINC00494-203ENST00000433094 GTF3C3Q9Y5Q9 886 aa15.81■□□□□ 0.12
LINC00494-203ENST00000433094 SLC24A1O60721 1099 aa15.71■□□□□ 0.11
LINC00494-203ENST00000433094 CENPBP07199 599 aaPredicted RBP15.71■□□□□ 0.1
LINC00494-203ENST00000433094 TTBK1Q5TCY1 1321 aaPredicted RBP15.5■□□□□ 0.07
LINC00494-203ENST00000433094 DIEXFQ68CQ4 756 aaKnown RBP15.5■□□□□ 0.07
LINC00494-203ENST00000433094 CCER1Q8TC90 406 aaPredicted RBP15.36■□□□□ 0.05
LINC00494-203ENST00000433094 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.35■□□□□ 0.05
LINC00494-203ENST00000433094 BCL11AQ9H165 835 aa15.34■□□□□ 0.05
LINC00494-203ENST00000433094 ZCCHC6Q5VYS8 1495 aaKnown RBP15.31■□□□□ 0.04
LINC00494-203ENST00000433094 YTHDC1Q96MU7 727 aaKnown RBP15.3■□□□□ 0.04
LINC00494-203ENST00000433094 FAM9AQ8IZU1 332 aaPredicted RBP15.2■□□□□ 0.02
LINC00494-203ENST00000433094 TRIM41Q8WV44 630 aa15.19■□□□□ 0.02
LINC00494-203ENST00000433094 PRKCSHP14314 528 aaPredicted RBP15.18■□□□□ 0.02
LINC00494-203ENST00000433094 DCAF8L2P0C7V8 631 aa15.17■□□□□ 0.02
LINC00494-203ENST00000433094 ANP32EQ9BTT0 268 aa15.17■□□□□ 0.02
LINC00494-203ENST00000433094 EHMT2Q96KQ7 1210 aa15.16■□□□□ 0.02
LINC00494-203ENST00000433094 ZNF316A6NFI3 1004 aaPredicted RBP15.12■□□□□ 0.01
LINC00494-203ENST00000433094 MIER1Q8N108 512 aa15.06■□□□□ 0
LINC00494-203ENST00000433094 CSRNP3Q8WYN3 585 aa15.01□□□□□ -0.01
LINC00494-203ENST00000433094 TSHZ2Q9NRE2 1034 aa14.98□□□□□ -0.01
LINC00494-203ENST00000433094 SUPT16HQ9Y5B9 1047 aaKnown RBP14.96□□□□□ -0.02
LINC00494-203ENST00000433094 CLSPNQ9HAW4 1339 aa14.91□□□□□ -0.02
LINC00494-203ENST00000433094 ABCC9O60706 1549 aa14.72□□□□□ -0.05
LINC00494-203ENST00000433094 APLP2Q06481 763 aa14.68□□□□□ -0.06
LINC00494-203ENST00000433094 BCANQ96GW7 911 aa14.64□□□□□ -0.07
LINC00494-203ENST00000433094 ERICH6Q7L0X2 663 aa14.63□□□□□ -0.07
LINC00494-203ENST00000433094 RSF1Q96T23 1441 aaPredicted RBP14.62□□□□□ -0.07
LINC00494-203ENST00000433094 RBM19Q9Y4C8 960 aaKnown RBP14.62□□□□□ -0.07
LINC00494-203ENST00000433094 WRNQ14191 1432 aaPredicted RBP eCLIP14.57□□□□□ -0.08
LINC00494-203ENST00000433094 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
LINC00494-203ENST00000433094 RB1CC1Q8TDY2 1594 aa14.55□□□□□ -0.08
LINC00494-203ENST00000433094 DAXXQ9UER7 740 aaPredicted RBP14.55□□□□□ -0.08
LINC00494-203ENST00000433094 FKBP8Q14318 412 aa14.53□□□□□ -0.08
LINC00494-203ENST00000433094 MSH5O43196 834 aa14.48□□□□□ -0.09
LINC00494-203ENST00000433094 CEP162Q5TB80 1403 aa14.46□□□□□ -0.09
LINC00494-203ENST00000433094 NEFLP07196 543 aa14.42□□□□□ -0.1
LINC00494-203ENST00000433094 ITGAEP38570 1179 aa14.4□□□□□ -0.1
LINC00494-203ENST00000433094 KCNH8Q96L42 1107 aa14.4□□□□□ -0.1
LINC00494-203ENST00000433094 ANO8Q9HCE9 1232 aaPredicted RBP14.37□□□□□ -0.11
LINC00494-203ENST00000433094 MYT1LQ9UL68 1186 aa14.37□□□□□ -0.11
LINC00494-203ENST00000433094 UBTFP17480 764 aaKnown RBP14.35□□□□□ -0.11
LINC00494-203ENST00000433094 DEKP35659 375 aaKnown RBP14.35□□□□□ -0.11
LINC00494-203ENST00000433094 TNIKQ9UKE5 1360 aa14.34□□□□□ -0.11
LINC00494-203ENST00000433094 FANCIQ9NVI1 1328 aa14.34□□□□□ -0.11
LINC00494-203ENST00000433094 CDK11AQ9UQ88 783 aaPredicted RBP14.24□□□□□ -0.13
LINC00494-203ENST00000433094 DHX57Q6P158 1386 aaKnown RBP14.21□□□□□ -0.14
LINC00494-203ENST00000433094 TRIM52Q96A61 297 aa14.2□□□□□ -0.14
LINC00494-203ENST00000433094 SALL2Q9Y467 1007 aaPredicted RBP14.2□□□□□ -0.14
LINC00494-203ENST00000433094 CCDC88BA6NC98 1476 aa14.18□□□□□ -0.14
LINC00494-203ENST00000433094 SOGA1O94964 1423 aa14.17□□□□□ -0.14
LINC00494-203ENST00000433094 SCRIBQ14160 1630 aa14.16□□□□□ -0.14
LINC00494-203ENST00000433094 ERICH6BQ5W0A0 696 aa14.16□□□□□ -0.14
LINC00494-203ENST00000433094 DDX10Q13206 875 aaKnown RBP14.15□□□□□ -0.14
LINC00494-203ENST00000433094 NBR1Q14596 966 aa14.13□□□□□ -0.15
LINC00494-203ENST00000433094 ABCC8Q09428 1581 aa14.13□□□□□ -0.15
LINC00494-203ENST00000433094 CCDC136Q96JN2 1154 aa14.13□□□□□ -0.15
LINC00494-203ENST00000433094 CECR2Q9BXF3 1484 aa14.09□□□□□ -0.15
LINC00494-203ENST00000433094 GOLGA3Q08378 1498 aa14.09□□□□□ -0.15
LINC00494-203ENST00000433094 IRX6P78412 446 aaPredicted RBP14.08□□□□□ -0.16
LINC00494-203ENST00000433094 EEA1Q15075 1411 aa14.08□□□□□ -0.16
LINC00494-203ENST00000433094 MROH2BQ7Z745 1585 aa14.07□□□□□ -0.16
LINC00494-203ENST00000433094 RUSC2Q8N2Y8 1516 aa14.05□□□□□ -0.16
LINC00494-203ENST00000433094 NOP58Q9Y2X3 529 aaKnown RBP14.05□□□□□ -0.16
LINC00494-203ENST00000433094 PLPPR3Q6T4P5 718 aa14.05□□□□□ -0.16
LINC00494-203ENST00000433094 CCER2I3L3R5 266 aa14.04□□□□□ -0.16
LINC00494-203ENST00000433094 CLIP1P30622 1438 aa14.03□□□□□ -0.16
LINC00494-203ENST00000433094 UBE2Q2Q8WVN8 375 aa14.03□□□□□ -0.16
LINC00494-203ENST00000433094 ANP32CO43423 234 aa14.03□□□□□ -0.16
LINC00494-203ENST00000433094 VPS8Q8N3P4 1428 aa14.02□□□□□ -0.16
LINC00494-203ENST00000433094 EIF4G1Q04637 1599 aaKnown RBP14.02□□□□□ -0.17
LINC00494-203ENST00000433094 IL27Q8NEV9 243 aa14.01□□□□□ -0.17
LINC00494-203ENST00000433094 RTN4Q9NQC3 1192 aaKnown RBP14.01□□□□□ -0.17
LINC00494-203ENST00000433094 WIZO95785 1651 aa14.01□□□□□ -0.17
LINC00494-203ENST00000433094 PABPN1Q86U42 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
LINC00494-203ENST00000433094 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.01□□□□□ -0.17
LINC00494-203ENST00000433094 RTL5Q5HYW3 569 aaPredicted RBP14□□□□□ -0.17
LINC00494-203ENST00000433094 PAK3O75914 559 aaPredicted RBP14□□□□□ -0.17
LINC00494-203ENST00000433094 NACADO15069 1562 aa14□□□□□ -0.17
LINC00494-203ENST00000433094 EIF5BO60841 1220 aaKnown RBP13.99□□□□□ -0.17
LINC00494-203ENST00000433094 PPP1R15AO75807 674 aaPredicted RBP13.99□□□□□ -0.17
LINC00494-203ENST00000433094 RANGAP1P46060 587 aaPredicted RBP13.99□□□□□ -0.17
LINC00494-203ENST00000433094 PLEKHG5O94827 1062 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms