RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 POLKQ9UBT6 870 aa20.49■□□□□ 0.87
VARS2-203ENST00000428017 FLT4P35916 1363 aa20.48■□□□□ 0.87
VARS2-203ENST00000428017 CSB-PGBD3P0DP91 1061 aa20.48■□□□□ 0.87
VARS2-203ENST00000428017 HOXC9P31274 260 aa20.48■□□□□ 0.87
VARS2-203ENST00000428017 AXIN2Q9Y2T1 843 aa20.47■□□□□ 0.87
VARS2-203ENST00000428017 CCDC9Q9Y3X0 531 aaKnown RBP20.47■□□□□ 0.87
VARS2-203ENST00000428017 ABCC6O95255 1503 aa20.47■□□□□ 0.87
VARS2-203ENST00000428017 BLMP54132 1417 aaPredicted RBP20.46■□□□□ 0.87
VARS2-203ENST00000428017 PARD3Q8TEW0 1356 aa20.46■□□□□ 0.87
VARS2-203ENST00000428017 BCL9LQ86UU0 1499 aa20.45■□□□□ 0.86
VARS2-203ENST00000428017 ANP32CO43423 234 aa20.45■□□□□ 0.86
VARS2-203ENST00000428017 MTHFSP49914 203 aa20.45■□□□□ 0.86
VARS2-203ENST00000428017 LTV1Q96GA3 475 aaPredicted RBP20.45■□□□□ 0.86
VARS2-203ENST00000428017 TRPC5Q9UL62 973 aaPredicted RBP20.45■□□□□ 0.86
VARS2-203ENST00000428017 SMG6Q86US8 1419 aaKnown RBP20.44■□□□□ 0.86
VARS2-203ENST00000428017 PPP2R1AP30153 589 aa20.44■□□□□ 0.86
VARS2-203ENST00000428017 HSP90AB2PQ58FF8 381 aa20.44■□□□□ 0.86
VARS2-203ENST00000428017 CAMTA1Q9Y6Y1 1673 aa20.44■□□□□ 0.86
VARS2-203ENST00000428017 PLCH1Q4KWH8 1693 aa20.43■□□□□ 0.86
VARS2-203ENST00000428017 TOM1L2Q6ZVM7 507 aa20.43■□□□□ 0.86
VARS2-203ENST00000428017 ANKRD24Q8TF21 1146 aa20.43■□□□□ 0.86
VARS2-203ENST00000428017 QTRT2Q9H974 415 aaKnown RBP20.43■□□□□ 0.86
VARS2-203ENST00000428017 COL5A2P05997 1499 aaPredicted RBP20.43■□□□□ 0.86
VARS2-203ENST00000428017 LTN1O94822 1766 aa20.42■□□□□ 0.86
VARS2-203ENST00000428017 VPS72Q15906 364 aa20.42■□□□□ 0.86
VARS2-203ENST00000428017 CFAP53Q96M91 514 aa20.42■□□□□ 0.86
VARS2-203ENST00000428017 PRKRIP1Q9H875 184 aaPredicted RBP20.42■□□□□ 0.86
VARS2-203ENST00000428017 INSRP06213 1382 aa20.42■□□□□ 0.86
VARS2-203ENST00000428017 LMO7Q8WWI1 1683 aa20.42■□□□□ 0.86
VARS2-203ENST00000428017 LARP1Q6PKG0 1096 aaKnown RBP20.41■□□□□ 0.86
VARS2-203ENST00000428017 NLRP2Q9NX02 1062 aa20.41■□□□□ 0.86
VARS2-203ENST00000428017 ERBB3P21860 1342 aa20.41■□□□□ 0.86
VARS2-203ENST00000428017 WDR17Q8IZU2 1322 aa20.41■□□□□ 0.86
VARS2-203ENST00000428017 NWD2Q9ULI1 1742 aa20.41■□□□□ 0.86
VARS2-203ENST00000428017 MYBBP1AQ9BQG0 1328 aaKnown RBP20.4■□□□□ 0.86
VARS2-203ENST00000428017 CDK12Q9NYV4 1490 aaPredicted RBP20.4■□□□□ 0.86
VARS2-203ENST00000428017 USP35Q9P2H5 1018 aa20.39■□□□□ 0.85
VARS2-203ENST00000428017 RGS17Q9UGC6 210 aaPredicted RBP20.39■□□□□ 0.85
VARS2-203ENST00000428017 COL18A1P39060 1754 aa20.39■□□□□ 0.85
VARS2-203ENST00000428017 ATRNO75882 1429 aa20.38■□□□□ 0.85
VARS2-203ENST00000428017 CRB1P82279 1406 aa20.37■□□□□ 0.85
VARS2-203ENST00000428017 GJD4Q96KN9 370 aaPredicted RBP20.37■□□□□ 0.85
VARS2-203ENST00000428017 PEAK1Q9H792 1746 aa20.36■□□□□ 0.85
VARS2-203ENST00000428017 SPATA31A5Q5VU36 1347 aa20.36■□□□□ 0.85
VARS2-203ENST00000428017 SPATA31A7Q8IWB4 1347 aa20.36■□□□□ 0.85
VARS2-203ENST00000428017 RXRBP28702 533 aa20.36■□□□□ 0.85
VARS2-203ENST00000428017 RBM6P78332 1123 aaKnown RBP20.36■□□□□ 0.85
VARS2-203ENST00000428017 NRAPQ86VF7 1730 aa20.36■□□□□ 0.85
VARS2-203ENST00000428017 DIAPH1O60610 1272 aaKnown RBP20.35■□□□□ 0.85
VARS2-203ENST00000428017 EIF4A2Q14240 407 aaKnown RBP20.35■□□□□ 0.85
VARS2-203ENST00000428017 DIEXFQ68CQ4 756 aaKnown RBP20.35■□□□□ 0.85
VARS2-203ENST00000428017 POTEAQ6S8J7 498 aa20.35■□□□□ 0.85
VARS2-203ENST00000428017 TCP11L2Q8N4U5 519 aa20.35■□□□□ 0.85
VARS2-203ENST00000428017 CARD10Q9BWT7 1032 aa20.35■□□□□ 0.85
VARS2-203ENST00000428017 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.35■□□□□ 0.85
VARS2-203ENST00000428017 MAP2P11137 1827 aaKnown RBP20.34■□□□□ 0.85
VARS2-203ENST00000428017 SPATA31A1Q5TZJ5 1347 aa20.34■□□□□ 0.85
VARS2-203ENST00000428017 A0A0G2JS52 829 aa20.33■□□□□ 0.85
VARS2-203ENST00000428017 MYT1Q01538 1121 aa20.33■□□□□ 0.85
VARS2-203ENST00000428017 NUDCQ9Y266 331 aa20.32■□□□□ 0.84
VARS2-203ENST00000428017 THRAP3Q9Y2W1 955 aaKnown RBP20.32■□□□□ 0.84
VARS2-203ENST00000428017 FAM98CQ17RN3 349 aaKnown RBP20.31■□□□□ 0.84
VARS2-203ENST00000428017 NBPF6Q5VWK0 638 aa20.31■□□□□ 0.84
VARS2-203ENST00000428017 NBPF4Q96M43 638 aa20.31■□□□□ 0.84
VARS2-203ENST00000428017 IL13P35225 146 aa20.3■□□□□ 0.84
VARS2-203ENST00000428017 U2SURPO15042 1029 aaKnown RBP20.29■□□□□ 0.84
VARS2-203ENST00000428017 BARGINQ6ZT62 677 aa20.29■□□□□ 0.84
VARS2-203ENST00000428017 USHBP1Q8N6Y0 703 aa20.29■□□□□ 0.84
VARS2-203ENST00000428017 EYA1Q99502 592 aa20.29■□□□□ 0.84
VARS2-203ENST00000428017 RGPD5Q99666 1765 aa20.29■□□□□ 0.84
VARS2-203ENST00000428017 CDCA7Q9BWT1 371 aaPredicted RBP20.28■□□□□ 0.84
VARS2-203ENST00000428017 FAM208AQ9UK61 1670 aaKnown RBP20.27■□□□□ 0.84
VARS2-203ENST00000428017 RAPGEF4Q8WZA2 1011 aa20.27■□□□□ 0.84
VARS2-203ENST00000428017 IL2RBP14784 551 aa20.26■□□□□ 0.83
VARS2-203ENST00000428017 GLI3P10071 1580 aa20.25■□□□□ 0.83
VARS2-203ENST00000428017 COL3A1P02461 1466 aaPredicted RBP20.25■□□□□ 0.83
VARS2-203ENST00000428017 IGSF1Q8N6C5 1336 aa20.25■□□□□ 0.83
VARS2-203ENST00000428017 U2AF1L5P0DN76 240 aaPredicted RBP20.24■□□□□ 0.83
VARS2-203ENST00000428017 U2AF1Q01081 240 aaKnown RBP eCLIP20.24■□□□□ 0.83
VARS2-203ENST00000428017 SULT6B1Q6IMI4 303 aa20.24■□□□□ 0.83
VARS2-203ENST00000428017 SEPT12Q8IYM1 358 aa20.24■□□□□ 0.83
VARS2-203ENST00000428017 ONECUT3O60422 494 aaPredicted RBP20.23■□□□□ 0.83
VARS2-203ENST00000428017 TATP17735 454 aaPredicted RBP20.23■□□□□ 0.83
VARS2-203ENST00000428017 MRS2Q9HD23 443 aa20.22■□□□□ 0.83
VARS2-203ENST00000428017 HMOX1P09601 288 aa20.21■□□□□ 0.83
VARS2-203ENST00000428017 WDR43Q15061 677 aaKnown RBP eCLIP20.21■□□□□ 0.83
VARS2-203ENST00000428017 DDB1Q16531 1140 aa20.21■□□□□ 0.83
VARS2-203ENST00000428017 EXOC5O00471 708 aa20.2■□□□□ 0.82
VARS2-203ENST00000428017 PDE3BQ13370 1112 aa20.19■□□□□ 0.82
VARS2-203ENST00000428017 AEBP1Q8IUX7 1158 aa20.19■□□□□ 0.82
VARS2-203ENST00000428017 DISP2A7MBM2 1401 aa20.19■□□□□ 0.82
VARS2-203ENST00000428017 RGS12O14924 1447 aa20.19■□□□□ 0.82
VARS2-203ENST00000428017 NCAPD2Q15021 1401 aa20.19■□□□□ 0.82
VARS2-203ENST00000428017 NEFMP07197 916 aa20.17■□□□□ 0.82
VARS2-203ENST00000428017 ZCRB1Q8TBF4 217 aaKnown RBP20.17■□□□□ 0.82
VARS2-203ENST00000428017 PNNQ9H307 717 aaKnown RBP20.17■□□□□ 0.82
VARS2-203ENST00000428017 KDRP35968 1356 aa20.17■□□□□ 0.82
VARS2-203ENST00000428017 MEGF6O75095 1541 aa20.17■□□□□ 0.82
VARS2-203ENST00000428017 SPG7Q9UQ90 795 aa20.16■□□□□ 0.82
VARS2-203ENST00000428017 FCHSD2O94868 740 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms