RNA–Protein interactions for RNA: ENST00000427678.1

KDM3A-204, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-204ENST00000427678 SPATA31A1Q5TZJ5 1347 aa20.43■□□□□ 0.86
KDM3A-204ENST00000427678 IP6K1Q92551 441 aa20.42■□□□□ 0.86
KDM3A-204ENST00000427678 USP35Q9P2H5 1018 aa20.42■□□□□ 0.86
KDM3A-204ENST00000427678 NFAT5O94916 1531 aa20.42■□□□□ 0.86
KDM3A-204ENST00000427678 FAM98CQ17RN3 349 aaKnown RBP20.41■□□□□ 0.86
KDM3A-204ENST00000427678 TOM1L2Q6ZVM7 507 aa20.41■□□□□ 0.86
KDM3A-204ENST00000427678 SEPT12Q8IYM1 358 aa20.41■□□□□ 0.86
KDM3A-204ENST00000427678 MAP3K19Q56UN5 1328 aa20.41■□□□□ 0.86
KDM3A-204ENST00000427678 PLCH1Q4KWH8 1693 aa20.41■□□□□ 0.86
KDM3A-204ENST00000427678 A0A0G2JS52 829 aa20.4■□□□□ 0.86
KDM3A-204ENST00000427678 MYT1Q01538 1121 aa20.4■□□□□ 0.86
KDM3A-204ENST00000427678 RRS1Q15050 365 aaKnown RBP20.4■□□□□ 0.86
KDM3A-204ENST00000427678 TCP11L2Q8N4U5 519 aa20.4■□□□□ 0.86
KDM3A-204ENST00000427678 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.4■□□□□ 0.86
KDM3A-204ENST00000427678 WDR17Q8IZU2 1322 aa20.39■□□□□ 0.85
KDM3A-204ENST00000427678 PER1O15534 1290 aaPredicted RBP20.39■□□□□ 0.85
KDM3A-204ENST00000427678 THRAP3Q9Y2W1 955 aaKnown RBP20.39■□□□□ 0.85
KDM3A-204ENST00000427678 COL5A2P05997 1499 aaPredicted RBP20.38■□□□□ 0.85
KDM3A-204ENST00000427678 BARGINQ6ZT62 677 aa20.38■□□□□ 0.85
KDM3A-204ENST00000427678 MORC1Q86VD1 984 aa20.38■□□□□ 0.85
KDM3A-204ENST00000427678 USP54Q70EL1 1684 aa20.38■□□□□ 0.85
KDM3A-204ENST00000427678 RGS12O14924 1447 aa20.37■□□□□ 0.85
KDM3A-204ENST00000427678 NSD2O96028 1365 aa20.37■□□□□ 0.85
KDM3A-204ENST00000427678 HOXC9P31274 260 aa20.37■□□□□ 0.85
KDM3A-204ENST00000427678 AMER1Q5JTC6 1135 aaPredicted RBP20.37■□□□□ 0.85
KDM3A-204ENST00000427678 CRB1P82279 1406 aa20.36■□□□□ 0.85
KDM3A-204ENST00000427678 TNNT2P45379 298 aaPredicted RBP20.36■□□□□ 0.85
KDM3A-204ENST00000427678 ANKRD24Q8TF21 1146 aa20.36■□□□□ 0.85
KDM3A-204ENST00000427678 CARD10Q9BWT7 1032 aa20.36■□□□□ 0.85
KDM3A-204ENST00000427678 LMO7Q8WWI1 1683 aa20.35■□□□□ 0.85
KDM3A-204ENST00000427678 NLRP2Q9NX02 1062 aa20.35■□□□□ 0.85
KDM3A-204ENST00000427678 GLI3P10071 1580 aa20.34■□□□□ 0.85
KDM3A-204ENST00000427678 ERBB3P21860 1342 aa20.34■□□□□ 0.85
KDM3A-204ENST00000427678 PPM1GO15355 546 aaPredicted RBP20.34■□□□□ 0.85
KDM3A-204ENST00000427678 LTV1Q96GA3 475 aaPredicted RBP20.34■□□□□ 0.85
KDM3A-204ENST00000427678 BLMP54132 1417 aaPredicted RBP20.34■□□□□ 0.85
KDM3A-204ENST00000427678 NRAPQ86VF7 1730 aa20.33■□□□□ 0.85
KDM3A-204ENST00000427678 ABCC6O95255 1503 aa20.33■□□□□ 0.85
KDM3A-204ENST00000427678 KIF24Q5T7B8 1368 aa20.33■□□□□ 0.84
KDM3A-204ENST00000427678 COL18A1P39060 1754 aa20.32■□□□□ 0.84
KDM3A-204ENST00000427678 KRT27Q7Z3Y8 459 aa20.32■□□□□ 0.84
KDM3A-204ENST00000427678 CDCA7Q9BWT1 371 aaPredicted RBP20.32■□□□□ 0.84
KDM3A-204ENST00000427678 POLKQ9UBT6 870 aa20.32■□□□□ 0.84
KDM3A-204ENST00000427678 EMILIN1Q9Y6C2 1016 aa20.32■□□□□ 0.84
KDM3A-204ENST00000427678 RTL1A6NKG5 1358 aa20.32■□□□□ 0.84
KDM3A-204ENST00000427678 HSP90AB2PQ58FF8 381 aa20.31■□□□□ 0.84
KDM3A-204ENST00000427678 CC2D1BQ5T0F9 858 aaKnown RBP20.31■□□□□ 0.84
KDM3A-204ENST00000427678 FLT4P35916 1363 aa20.3■□□□□ 0.84
KDM3A-204ENST00000427678 PDE3BQ13370 1112 aa20.29■□□□□ 0.84
KDM3A-204ENST00000427678 KIF20BQ96Q89 1820 aa20.28■□□□□ 0.84
KDM3A-204ENST00000427678 INSRP06213 1382 aa20.28■□□□□ 0.84
KDM3A-204ENST00000427678 NPC1L1Q9UHC9 1359 aa20.28■□□□□ 0.84
KDM3A-204ENST00000427678 CNGB1Q14028 1251 aaPredicted RBP20.26■□□□□ 0.83
KDM3A-204ENST00000427678 UPF1Q92900 1129 aaKnown RBP eCLIP20.25■□□□□ 0.83
KDM3A-204ENST00000427678 SMG6Q86US8 1419 aaKnown RBP20.25■□□□□ 0.83
KDM3A-204ENST00000427678 EXOC5O00471 708 aa20.24■□□□□ 0.83
KDM3A-204ENST00000427678 DDB1Q16531 1140 aa20.24■□□□□ 0.83
KDM3A-204ENST00000427678 LTN1O94822 1766 aa20.23■□□□□ 0.83
KDM3A-204ENST00000427678 IL2RBP14784 551 aa20.23■□□□□ 0.83
KDM3A-204ENST00000427678 DDX10Q13206 875 aaKnown RBP20.23■□□□□ 0.83
KDM3A-204ENST00000427678 NBPF6Q5VWK0 638 aa20.23■□□□□ 0.83
KDM3A-204ENST00000427678 NBPF4Q96M43 638 aa20.23■□□□□ 0.83
KDM3A-204ENST00000427678 FAM196AQ6ZSG2 479 aa20.21■□□□□ 0.83
KDM3A-204ENST00000427678 CCDC125Q86Z20 511 aa20.21■□□□□ 0.83
KDM3A-204ENST00000427678 MTHFSP49914 203 aa20.2■□□□□ 0.82
KDM3A-204ENST00000427678 FAM182BQ5T319 152 aa20.2■□□□□ 0.82
KDM3A-204ENST00000427678 RGPD5Q99666 1765 aa20.19■□□□□ 0.82
KDM3A-204ENST00000427678 EIF4A2Q14240 407 aaKnown RBP20.18■□□□□ 0.82
KDM3A-204ENST00000427678 THSD7AQ9UPZ6 1657 aa20.17■□□□□ 0.82
KDM3A-204ENST00000427678 USHBP1Q8N6Y0 703 aa20.17■□□□□ 0.82
KDM3A-204ENST00000427678 RAPGEF4Q8WZA2 1011 aa20.17■□□□□ 0.82
KDM3A-204ENST00000427678 DISP2A7MBM2 1401 aa20.17■□□□□ 0.82
KDM3A-204ENST00000427678 ZNF316A6NFI3 1004 aaPredicted RBP20.16■□□□□ 0.82
KDM3A-204ENST00000427678 EYA1Q99502 592 aa20.16■□□□□ 0.82
KDM3A-204ENST00000427678 SF3B2Q13435 895 aaKnown RBP20.15■□□□□ 0.82
KDM3A-204ENST00000427678 ANKRD26Q9UPS8 1709 aa20.15■□□□□ 0.82
KDM3A-204ENST00000427678 PEAK1Q9H792 1746 aa20.14■□□□□ 0.81
KDM3A-204ENST00000427678 TATP17735 454 aaPredicted RBP20.14■□□□□ 0.81
KDM3A-204ENST00000427678 MARCH10Q8NA82 808 aaPredicted RBP20.14■□□□□ 0.81
KDM3A-204ENST00000427678 ZCRB1Q8TBF4 217 aaKnown RBP20.13■□□□□ 0.81
KDM3A-204ENST00000427678 MAP2P11137 1827 aaKnown RBP20.13■□□□□ 0.81
KDM3A-204ENST00000427678 PPP2R1AP30153 589 aa20.11■□□□□ 0.81
KDM3A-204ENST00000427678 IL13P35225 146 aa20.11■□□□□ 0.81
KDM3A-204ENST00000427678 DDX54Q8TDD1 881 aaKnown RBP20.11■□□□□ 0.81
KDM3A-204ENST00000427678 BRWD3Q6RI45 1802 aa20.11■□□□□ 0.81
KDM3A-204ENST00000427678 DIAPH1O60610 1272 aaKnown RBP20.1■□□□□ 0.81
KDM3A-204ENST00000427678 TRIM37O94972 964 aa20.1■□□□□ 0.81
KDM3A-204ENST00000427678 CFAP53Q96M91 514 aa20.09■□□□□ 0.81
KDM3A-204ENST00000427678 IGSF1Q8N6C5 1336 aa20.08■□□□□ 0.81
KDM3A-204ENST00000427678 RALBP1Q15311 655 aa20.08■□□□□ 0.81
KDM3A-204ENST00000427678 OVOS2A0A0G2JMS6 1433 aa20.08■□□□□ 0.8
KDM3A-204ENST00000427678 PARP4Q9UKK3 1724 aaKnown RBP20.07■□□□□ 0.8
KDM3A-204ENST00000427678 FAM208AQ9UK61 1670 aaKnown RBP20.07■□□□□ 0.8
KDM3A-204ENST00000427678 TNS2Q63HR2 1409 aa20.07■□□□□ 0.8
KDM3A-204ENST00000427678 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.06■□□□□ 0.81e-10■■□□□ 12.4
KDM3A-204ENST00000427678 SPG7Q9UQ90 795 aa20.06■□□□□ 0.8
KDM3A-204ENST00000427678 BCL9O00512 1426 aa20.05■□□□□ 0.8
KDM3A-204ENST00000427678 SULT6B1Q6IMI4 303 aa20.05■□□□□ 0.8
KDM3A-204ENST00000427678 MEGF6O75095 1541 aa20.05■□□□□ 0.8
KDM3A-204ENST00000427678 NCAPD2Q15021 1401 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms