RNA–Protein interactions for RNA: ENST00000424585.1

NEB-208, Transcript of nebulin, humanhuman

TSL 3

Gene NEB, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-208ENST00000424585 DNMT3LQ9UJW3 386 aa7.85□□□□□ -1.15
NEB-208ENST00000424585 CARD14Q9BXL6 1004 aa7.84□□□□□ -1.15
NEB-208ENST00000424585 PGPEP1Q9NXJ5 209 aa7.84□□□□□ -1.15
NEB-208ENST00000424585 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.83□□□□□ -1.16
NEB-208ENST00000424585 SH3D19Q5HYK7 790 aa7.83□□□□□ -1.16
NEB-208ENST00000424585 PPP2R2DQ66LE6 453 aa7.83□□□□□ -1.16
NEB-208ENST00000424585 Q6ZVU0 165 aa7.83□□□□□ -1.16
NEB-208ENST00000424585 ARHGAP9Q9BRR9 750 aa7.83□□□□□ -1.16
NEB-208ENST00000424585 DHX9Q08211 1270 aaKnown RBP7.82□□□□□ -1.16
NEB-208ENST00000424585 PPP1R26Q5T8A7 1209 aaPredicted RBP7.82□□□□□ -1.16
NEB-208ENST00000424585 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.82□□□□□ -1.16
NEB-208ENST00000424585 GPSM3Q9Y4H4 160 aa7.82□□□□□ -1.16
NEB-208ENST00000424585 TTLL8A6PVC2 850 aa7.81□□□□□ -1.16
NEB-208ENST00000424585 LRRN4Q8WUT4 740 aa7.81□□□□□ -1.16
NEB-208ENST00000424585 SLC10A4Q96EP9 437 aa7.81□□□□□ -1.16
NEB-208ENST00000424585 BCANQ96GW7 911 aa7.81□□□□□ -1.16
NEB-208ENST00000424585 DDRGK1Q96HY6 314 aa7.81□□□□□ -1.16
NEB-208ENST00000424585 KCTD15Q96SI1 283 aaPredicted RBP7.81□□□□□ -1.16
NEB-208ENST00000424585 SPINT1O43278 529 aa7.8□□□□□ -1.16
NEB-208ENST00000424585 PTK2Q05397 1052 aa7.8□□□□□ -1.16
NEB-208ENST00000424585 ZBTB33Q86T24 672 aa7.8□□□□□ -1.16
NEB-208ENST00000424585 KDM4CQ9H3R0 1056 aa7.79□□□□□ -1.16
NEB-208ENST00000424585 PTSQ03393 145 aa7.78□□□□□ -1.16
NEB-208ENST00000424585 CBLBQ13191 982 aa7.78□□□□□ -1.16
NEB-208ENST00000424585 NR6A1Q15406 480 aa7.78□□□□□ -1.16
NEB-208ENST00000424585 FBXO31Q5XUX0 539 aaPredicted RBP7.78□□□□□ -1.16
NEB-208ENST00000424585 PROCA1Q8NCQ7 364 aaPredicted RBP7.78□□□□□ -1.16
NEB-208ENST00000424585 INTS6LQ5JSJ4 861 aaKnown RBP7.77□□□□□ -1.17
NEB-208ENST00000424585 PNMA1Q8ND90 353 aa7.77□□□□□ -1.17
NEB-208ENST00000424585 NANOS1Q8WY41 292 aaKnown RBP7.77□□□□□ -1.17
NEB-208ENST00000424585 OCSTAMPQ9BR26 566 aa7.77□□□□□ -1.17
NEB-208ENST00000424585 NBPF20Q3BBV1 942 aa7.76□□□□□ -1.17
NEB-208ENST00000424585 FAM117AQ9C073 453 aa7.76□□□□□ -1.17
NEB-208ENST00000424585 ADAM32Q8TC27 787 aa7.75□□□□□ -1.17
NEB-208ENST00000424585 AP1G2O75843 785 aa7.74□□□□□ -1.17
NEB-208ENST00000424585 CCDC155Q8N6L0 562 aa7.74□□□□□ -1.17
NEB-208ENST00000424585 GPBP1L1Q9HC44 474 aaPredicted RBP7.74□□□□□ -1.17
NEB-208ENST00000424585 SLC35F4A4IF30 521 aa7.73□□□□□ -1.17
NEB-208ENST00000424585 FIGNL2A6NMB9 653 aa7.73□□□□□ -1.17
NEB-208ENST00000424585 GPR161Q8N6U8 529 aaKnown RBP7.73□□□□□ -1.17
NEB-208ENST00000424585 ATP1B4Q9UN42 357 aaPredicted RBP7.73□□□□□ -1.17
NEB-208ENST00000424585 KRT76Q01546 638 aa7.72□□□□□ -1.17
NEB-208ENST00000424585 KCNMA1Q12791 1236 aa7.72□□□□□ -1.17
NEB-208ENST00000424585 USP17L8P0C7I0 530 aa7.71□□□□□ -1.18
NEB-208ENST00000424585 CTSOP43234 321 aaPredicted RBP7.71□□□□□ -1.18
NEB-208ENST00000424585 TRIM52Q96A61 297 aa7.71□□□□□ -1.18
NEB-208ENST00000424585 AGBL1Q96MI9 1066 aa7.71□□□□□ -1.18
NEB-208ENST00000424585 ITGA6P23229 1130 aa7.7□□□□□ -1.18
NEB-208ENST00000424585 RELBQ01201 579 aa7.7□□□□□ -1.18
NEB-208ENST00000424585 DZIP3Q86Y13 1208 aaKnown RBP7.7□□□□□ -1.18
NEB-208ENST00000424585 EPS8L1Q8TE68 723 aa7.7□□□□□ -1.18
NEB-208ENST00000424585 CNTNAP3BQ96NU0 1288 aa7.7□□□□□ -1.18
NEB-208ENST00000424585 INSM2Q96T92 566 aaPredicted RBP7.7□□□□□ -1.18
NEB-208ENST00000424585 CNTNAP3Q9BZ76 1288 aa7.7□□□□□ -1.18
NEB-208ENST00000424585 GOPCQ9HD26 462 aa7.7□□□□□ -1.18
NEB-208ENST00000424585 HMX1Q9NP08 348 aaPredicted RBP7.7□□□□□ -1.18
NEB-208ENST00000424585 ESPNB1AK53 854 aa7.69□□□□□ -1.18
NEB-208ENST00000424585 LILRA1O75019 489 aa7.69□□□□□ -1.18
NEB-208ENST00000424585 ADH1AP07327 375 aa7.69□□□□□ -1.18
NEB-208ENST00000424585 RFC5P40937 340 aa7.69□□□□□ -1.18
NEB-208ENST00000424585 SEPT12Q8IYM1 358 aa7.69□□□□□ -1.18
NEB-208ENST00000424585 ZNF784Q8NCA9 323 aaPredicted RBP7.69□□□□□ -1.18
NEB-208ENST00000424585 RNF217Q8TC41 542 aa7.69□□□□□ -1.18
NEB-208ENST00000424585 COL25A1Q9BXS0 654 aaPredicted RBP7.69□□□□□ -1.18
NEB-208ENST00000424585 ERVH48-1M5A8F1 160 aa7.68□□□□□ -1.18
NEB-208ENST00000424585 POLMQ9NP87 494 aaPredicted RBP7.68□□□□□ -1.18
NEB-208ENST00000424585 TMPRSS4Q9NRS4 437 aa7.68□□□□□ -1.18
NEB-208ENST00000424585 SLURP2P0DP57 97 aa7.67□□□□□ -1.18
NEB-208ENST00000424585 PTGIRP43119 386 aa7.67□□□□□ -1.18
NEB-208ENST00000424585 GSK3AP49840 483 aa7.67□□□□□ -1.18
NEB-208ENST00000424585 TMEM259Q4ZIN3 620 aa7.67□□□□□ -1.18
NEB-208ENST00000424585 SV2AQ7L0J3 742 aa7.67□□□□□ -1.18
NEB-208ENST00000424585 ZNF395Q9H8N7 513 aaPredicted RBP7.67□□□□□ -1.18
NEB-208ENST00000424585 SENP3-EIF4A1A0A087X0R7 540 aa7.66□□□□□ -1.18
NEB-208ENST00000424585 RNF225M0QZC1 329 aaPredicted RBP7.66□□□□□ -1.18
NEB-208ENST00000424585 ADD1P35611 737 aaKnown RBP7.66□□□□□ -1.18
NEB-208ENST00000424585 RNFT1Q5M7Z0 435 aa7.66□□□□□ -1.18
NEB-208ENST00000424585 CCDC125Q86Z20 511 aa7.66□□□□□ -1.18
NEB-208ENST00000424585 VWA5B2Q8N398 1253 aa7.66□□□□□ -1.18
NEB-208ENST00000424585 KDF1Q8NAX2 398 aaPredicted RBP7.66□□□□□ -1.18
NEB-208ENST00000424585 ADAMTS8Q9UP79 889 aa7.66□□□□□ -1.18
NEB-208ENST00000424585 FOXD4L5Q5VV16 416 aaPredicted RBP7.65□□□□□ -1.18
NEB-208ENST00000424585 TRIM34Q9BYJ4 488 aa7.65□□□□□ -1.18
NEB-208ENST00000424585 ZNF385CQ66K41 422 aaPredicted RBP7.64□□□□□ -1.19
NEB-208ENST00000424585 CDC14CA4D256 554 aa7.63□□□□□ -1.19
NEB-208ENST00000424585 RNF144AP50876 292 aaPredicted RBP7.63□□□□□ -1.19
NEB-208ENST00000424585 RAB15P59190 212 aa7.63□□□□□ -1.19
NEB-208ENST00000424585 LYSMD3Q7Z3D4 306 aa7.63□□□□□ -1.19
NEB-208ENST00000424585 TMEM151AQ8N4L1 468 aa7.63□□□□□ -1.19
NEB-208ENST00000424585 PCMTD1Q96MG8 357 aaPredicted RBP7.63□□□□□ -1.19
NEB-208ENST00000424585 ZBBXA8MT70 800 aa7.62□□□□□ -1.19
NEB-208ENST00000424585 RASSF7Q02833 373 aa7.62□□□□□ -1.19
NEB-208ENST00000424585 SVOPQ8N4V2 548 aa7.61□□□□□ -1.19
NEB-208ENST00000424585 GMCL1Q96IK5 515 aa7.61□□□□□ -1.19
NEB-208ENST00000424585 ARHGEF15O94989 841 aa7.6□□□□□ -1.19
NEB-208ENST00000424585 GDF11O95390 407 aa7.6□□□□□ -1.19
NEB-208ENST00000424585 GPC1P35052 558 aa7.6□□□□□ -1.19
NEB-208ENST00000424585 MCCD1P59942 119 aaPredicted RBP7.6□□□□□ -1.19
NEB-208ENST00000424585 SRSF11Q05519 484 aaKnown RBP7.6□□□□□ -1.19
NEB-208ENST00000424585 CYLDQ9NQC7 956 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms