RNA–Protein interactions for RNA: ENST00000424585.1

NEB-208, Transcript of nebulin, humanhuman

TSL 3

Gene NEB, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-208ENST00000424585 AEBP2Q6ZN18 517 aaPredicted RBP22.98■■□□□ 1.27
NEB-208ENST00000424585 CHIC1Q5VXU3 224 aa21.91■■□□□ 1.1
NEB-208ENST00000424585 SENP3Q9H4L4 574 aaPredicted RBP19.66■□□□□ 0.74
NEB-208ENST00000424585 PHF23Q9BUL5 403 aaPredicted RBP19.38■□□□□ 0.69
NEB-208ENST00000424585 FOXD1Q16676 465 aa18.28■□□□□ 0.52
NEB-208ENST00000424585 PLPPR3Q6T4P5 718 aa17.54■□□□□ 0.4
NEB-208ENST00000424585 MSH5O43196 834 aa17.15■□□□□ 0.34
NEB-208ENST00000424585 PPP6R1Q9UPN7 881 aa17.09■□□□□ 0.33
NEB-208ENST00000424585 PIAS4Q8N2W9 510 aaPredicted RBP17.08■□□□□ 0.32
NEB-208ENST00000424585 ADRA2BP18089 450 aa17.03■□□□□ 0.32
NEB-208ENST00000424585 POTEDQ86YR6 584 aa16.62■□□□□ 0.25
NEB-208ENST00000424585 SCAF1Q9H7N4 1312 aaKnown RBP15.68■□□□□ 0.1
NEB-208ENST00000424585 MAPK8IP2Q13387 824 aaPredicted RBP15.62■□□□□ 0.09
NEB-208ENST00000424585 DMRT2Q9Y5R5 561 aa15.59■□□□□ 0.09
NEB-208ENST00000424585 PPP4R3CPQ6ZMV5 832 aa15.34■□□□□ 0.05
NEB-208ENST00000424585 CNKSR2Q8WXI2 1034 aa15.08■□□□□ 0
NEB-208ENST00000424585 HOXD11P31277 338 aaPredicted RBP15.04■□□□□ -0
NEB-208ENST00000424585 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
NEB-208ENST00000424585 DCAF8L1A6NGE4 600 aa14.87□□□□□ -0.03
NEB-208ENST00000424585 NCBP3Q53F19 620 aaKnown RBP14.81□□□□□ -0.04
NEB-208ENST00000424585 CACNB1Q02641 598 aaPredicted RBP14.64□□□□□ -0.07
NEB-208ENST00000424585 RNF39Q9H2S5 420 aa14.62□□□□□ -0.07
NEB-208ENST00000424585 DNAJC5BQ9UF47 199 aa14.61□□□□□ -0.07
NEB-208ENST00000424585 NPM3O75607 178 aaKnown RBP14.55□□□□□ -0.08
NEB-208ENST00000424585 C1QBPQ07021 282 aaKnown RBP14.44□□□□□ -0.1
NEB-208ENST00000424585 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.3□□□□□ -0.12
NEB-208ENST00000424585 KCNA4P22459 653 aa14.27□□□□□ -0.13
NEB-208ENST00000424585 U3KPZ7 1027 aaPredicted RBP13.99□□□□□ -0.17
NEB-208ENST00000424585 SLC4A2P04920 1241 aa13.88□□□□□ -0.19
NEB-208ENST00000424585 SPINK5Q9NQ38 1064 aaPredicted RBP13.75□□□□□ -0.21
NEB-208ENST00000424585 CAPN15O75808 1086 aa13.74□□□□□ -0.21
NEB-208ENST00000424585 APLP2Q06481 763 aa13.69□□□□□ -0.22
NEB-208ENST00000424585 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.68□□□□□ -0.22
NEB-208ENST00000424585 DSG3P32926 999 aa13.68□□□□□ -0.22
NEB-208ENST00000424585 HNRNPUL2Q1KMD3 747 aaKnown RBP13.68□□□□□ -0.22
NEB-208ENST00000424585 SAMD1Q6SPF0 538 aaPredicted RBP13.59□□□□□ -0.23
NEB-208ENST00000424585 ZNF219Q9P2Y4 722 aaPredicted RBP13.57□□□□□ -0.24
NEB-208ENST00000424585 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
NEB-208ENST00000424585 SLC4A1APQ9BWU0 796 aaKnown RBP13.5□□□□□ -0.25
NEB-208ENST00000424585 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
NEB-208ENST00000424585 ABCB7O75027 752 aa13.39□□□□□ -0.27
NEB-208ENST00000424585 FOXD4L1Q9NU39 408 aa13.35□□□□□ -0.27
NEB-208ENST00000424585 POLA2Q14181 598 aa13.19□□□□□ -0.3
NEB-208ENST00000424585 ZBTB22O15209 634 aa13.12□□□□□ -0.31
NEB-208ENST00000424585 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
NEB-208ENST00000424585 RBM42Q9BTD8 480 aaKnown RBP13.1□□□□□ -0.31
NEB-208ENST00000424585 POTEHQ6S545 545 aa13.04□□□□□ -0.32
NEB-208ENST00000424585 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
NEB-208ENST00000424585 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
NEB-208ENST00000424585 AKT1S1Q96B36 256 aa12.79□□□□□ -0.36
NEB-208ENST00000424585 CHRDL2Q6WN34 429 aa12.76□□□□□ -0.37
NEB-208ENST00000424585 OSCARQ8IYS5 282 aa12.74□□□□□ -0.37
NEB-208ENST00000424585 FBLN2P98095 1184 aa12.65□□□□□ -0.38
NEB-208ENST00000424585 REM2Q8IYK8 340 aaPredicted RBP12.64□□□□□ -0.39
NEB-208ENST00000424585 SPDYE2BA6NHP3 402 aa12.58□□□□□ -0.4
NEB-208ENST00000424585 SPDYE6P0CI01 402 aa12.58□□□□□ -0.4
NEB-208ENST00000424585 SPDYE2Q495Y8 402 aa12.58□□□□□ -0.4
NEB-208ENST00000424585 CSRNP3Q8WYN3 585 aa12.56□□□□□ -0.4
NEB-208ENST00000424585 MKRN4PQ13434 485 aaPredicted RBP12.53□□□□□ -0.4
NEB-208ENST00000424585 PITPNM1O00562 1244 aa12.49□□□□□ -0.41
NEB-208ENST00000424585 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
NEB-208ENST00000424585 FXR2P51116 673 aaKnown RBP eCLIP12.41□□□□□ -0.42
NEB-208ENST00000424585 SSUH2Q9Y2M2 353 aa12.4□□□□□ -0.42
NEB-208ENST00000424585 ZNF692Q9BU19 519 aaPredicted RBP12.39□□□□□ -0.43
NEB-208ENST00000424585 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
NEB-208ENST00000424585 SPDYE1Q8NFV5 336 aaPredicted RBP12.34□□□□□ -0.43
NEB-208ENST00000424585 SP7Q8TDD2 431 aaPredicted RBP12.25□□□□□ -0.45
NEB-208ENST00000424585 CLEC11AQ9Y240 323 aa12.25□□□□□ -0.45
NEB-208ENST00000424585 HAX1O00165 279 aa12.2□□□□□ -0.46
NEB-208ENST00000424585 PABPN1Q86U42 306 aaKnown RBP eCLIP12.2□□□□□ -0.46
NEB-208ENST00000424585 PRKAR2AP13861 404 aaKnown RBP12.17□□□□□ -0.46
NEB-208ENST00000424585 PRR29P0C7W0 189 aa12.09□□□□□ -0.47
NEB-208ENST00000424585 EVX2Q03828 476 aa12.03□□□□□ -0.48
NEB-208ENST00000424585 C19orf67A6NJJ6 358 aa12.01□□□□□ -0.49
NEB-208ENST00000424585 CHADLQ6NUI6 762 aa12□□□□□ -0.49
NEB-208ENST00000424585 SPDYE4A6NLX3 237 aa11.96□□□□□ -0.49
NEB-208ENST00000424585 STAG3Q9UJ98 1225 aa11.95□□□□□ -0.5
NEB-208ENST00000424585 FARP1Q9Y4F1 1045 aaPredicted RBP11.88□□□□□ -0.51
NEB-208ENST00000424585 GABBR2O75899 941 aa11.8□□□□□ -0.52
NEB-208ENST00000424585 CD44P16070 742 aaKnown RBP11.79□□□□□ -0.52
NEB-208ENST00000424585 CREBZFQ9NS37 354 aa11.79□□□□□ -0.52
NEB-208ENST00000424585 CLCN6P51797 869 aa11.74□□□□□ -0.53
NEB-208ENST00000424585 PROM2Q8N271 834 aa11.74□□□□□ -0.53
NEB-208ENST00000424585 ZNF579Q8NAF0 562 aaKnown RBP11.64□□□□□ -0.55
NEB-208ENST00000424585 NPM1P06748 294 aaKnown RBP eCLIP11.62□□□□□ -0.55
NEB-208ENST00000424585 MNX1P50219 401 aaPredicted RBP11.62□□□□□ -0.55
NEB-208ENST00000424585 ZRANB1Q9UGI0 708 aa11.62□□□□□ -0.55
NEB-208ENST00000424585 PAK3O75914 559 aaPredicted RBP11.57□□□□□ -0.56
NEB-208ENST00000424585 POTEIP0CG38 1075 aa11.53□□□□□ -0.56
NEB-208ENST00000424585 DCBLD2Q96PD2 775 aa11.49□□□□□ -0.57
NEB-208ENST00000424585 LHX8Q68G74 356 aa11.48□□□□□ -0.57
NEB-208ENST00000424585 GALR2O43603 387 aaPredicted RBP11.44□□□□□ -0.58
NEB-208ENST00000424585 PLEKHG5O94827 1062 aa11.44□□□□□ -0.58
NEB-208ENST00000424585 PHF12Q96QT6 1004 aa11.44□□□□□ -0.58
NEB-208ENST00000424585 MIER1Q8N108 512 aa11.41□□□□□ -0.58
NEB-208ENST00000424585 FKBP8Q14318 412 aa11.37□□□□□ -0.59
NEB-208ENST00000424585 TSPYL2Q9H2G4 693 aaPredicted RBP11.34□□□□□ -0.59
NEB-208ENST00000424585 CCDC61Q9Y6R9 512 aa11.33□□□□□ -0.6
NEB-208ENST00000424585 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
NEB-208ENST00000424585 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms