RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 HAP1P54257 671 aaPredicted RBP28.69■■■□□ 2.18
ABCF3-202ENST00000421340 SHPRHQ149N8 1683 aa28.68■■■□□ 2.18
ABCF3-202ENST00000421340 JCADQ9P266 1359 aa28.67■■■□□ 2.18
ABCF3-202ENST00000421340 KIAA0232Q92628 1395 aa28.66■■■□□ 2.18
ABCF3-202ENST00000421340 U2AF1L5P0DN76 240 aaPredicted RBP28.66■■■□□ 2.18
ABCF3-202ENST00000421340 U2AF1Q01081 240 aaKnown RBP eCLIP28.66■■■□□ 2.18
ABCF3-202ENST00000421340 PNNQ9H307 717 aaKnown RBP28.66■■■□□ 2.18
ABCF3-202ENST00000421340 U2SURPO15042 1029 aaKnown RBP28.65■■■□□ 2.18
ABCF3-202ENST00000421340 LTN1O94822 1766 aa28.65■■■□□ 2.18
ABCF3-202ENST00000421340 FCHSD2O94868 740 aa28.64■■■□□ 2.18
ABCF3-202ENST00000421340 ZBTB7CA1YPR0 619 aa28.63■■■□□ 2.17
ABCF3-202ENST00000421340 PRDM11Q9NQV5 511 aa28.63■■■□□ 2.17
ABCF3-202ENST00000421340 ABCA3Q99758 1704 aa28.63■■■□□ 2.17
ABCF3-202ENST00000421340 AXIN2Q9Y2T1 843 aa28.62■■■□□ 2.17
ABCF3-202ENST00000421340 HSPA1LP34931 641 aa28.61■■■□□ 2.17
ABCF3-202ENST00000421340 RUNDC1Q96C34 613 aa28.59■■■□□ 2.17
ABCF3-202ENST00000421340 COL18A1P39060 1754 aa28.58■■■□□ 2.17
ABCF3-202ENST00000421340 ANKRD24Q8TF21 1146 aa28.58■■■□□ 2.17
ABCF3-202ENST00000421340 SPATA31A6Q5VVP1 1343 aa28.58■■■□□ 2.17
ABCF3-202ENST00000421340 IGSF1Q8N6C5 1336 aa28.58■■■□□ 2.17
ABCF3-202ENST00000421340 FAM83GA6ND36 823 aa28.57■■■□□ 2.16
ABCF3-202ENST00000421340 CHRNA2Q15822 529 aa28.57■■■□□ 2.16
ABCF3-202ENST00000421340 EYA1Q99502 592 aa28.57■■■□□ 2.16
ABCF3-202ENST00000421340 ERBB3P21860 1342 aa28.56■■■□□ 2.16
ABCF3-202ENST00000421340 NGEFQ8N5V2 710 aa28.56■■■□□ 2.16
ABCF3-202ENST00000421340 YTHDC1Q96MU7 727 aaKnown RBP28.56■■■□□ 2.16
ABCF3-202ENST00000421340 PLEKHF1Q96S99 279 aa28.56■■■□□ 2.16
ABCF3-202ENST00000421340 RSPH6AQ9H0K4 717 aa28.56■■■□□ 2.16
ABCF3-202ENST00000421340 KDRP35968 1356 aa28.54■■■□□ 2.16
ABCF3-202ENST00000421340 HNRNPUQ00839 825 aaKnown RBP eCLIP28.54■■■□□ 2.16
ABCF3-202ENST00000421340 NCBP3Q53F19 620 aaKnown RBP28.54■■■□□ 2.16
ABCF3-202ENST00000421340 LTV1Q96GA3 475 aaPredicted RBP28.54■■■□□ 2.16
ABCF3-202ENST00000421340 RGPD1P0DJD0 1748 aa28.54■■■□□ 2.16
ABCF3-202ENST00000421340 SULT6B1Q6IMI4 303 aa28.52■■■□□ 2.16
ABCF3-202ENST00000421340 LMO7Q8WWI1 1683 aa28.51■■■□□ 2.16
ABCF3-202ENST00000421340 NBPF6Q5VWK0 638 aa28.51■■■□□ 2.15
ABCF3-202ENST00000421340 NBPF4Q96M43 638 aa28.51■■■□□ 2.15
ABCF3-202ENST00000421340 HMOX1P09601 288 aa28.5■■■□□ 2.15
ABCF3-202ENST00000421340 CCDC146Q8IYE0 955 aa28.5■■■□□ 2.15
ABCF3-202ENST00000421340 CAMTA1Q9Y6Y1 1673 aa28.5■■■□□ 2.15
ABCF3-202ENST00000421340 NEFMP07197 916 aa28.49■■■□□ 2.15
ABCF3-202ENST00000421340 PRKAR2BP31323 418 aa28.49■■■□□ 2.15
ABCF3-202ENST00000421340 NCAPD2Q15021 1401 aa28.49■■■□□ 2.15
ABCF3-202ENST00000421340 COL14A1Q05707 1796 aaKnown RBP28.48■■■□□ 2.15
ABCF3-202ENST00000421340 NUTM2BA6NNL0 878 aaPredicted RBP28.47■■■□□ 2.15
ABCF3-202ENST00000421340 NUTM2EB1AL46 878 aaPredicted RBP28.47■■■□□ 2.15
ABCF3-202ENST00000421340 NUTM2AQ8IVF1 878 aaPredicted RBP28.47■■■□□ 2.15
ABCF3-202ENST00000421340 COL5A2P05997 1499 aaPredicted RBP28.46■■■□□ 2.15
ABCF3-202ENST00000421340 ZBED9Q6R2W3 1325 aa28.46■■■□□ 2.15
ABCF3-202ENST00000421340 WDR17Q8IZU2 1322 aa28.46■■■□□ 2.15
ABCF3-202ENST00000421340 MAPK8IP3Q9UPT6 1336 aa28.46■■■□□ 2.15
ABCF3-202ENST00000421340 APAF1O14727 1248 aa28.46■■■□□ 2.15
ABCF3-202ENST00000421340 AEBP1Q8IUX7 1158 aa28.46■■■□□ 2.15
ABCF3-202ENST00000421340 TCP11L2Q8N4U5 519 aa28.46■■■□□ 2.15
ABCF3-202ENST00000421340 FBXO41Q8TF61 875 aa28.46■■■□□ 2.15
ABCF3-202ENST00000421340 ADAMTS2O95450 1211 aa28.45■■■□□ 2.14
ABCF3-202ENST00000421340 CSB-PGBD3P0DP91 1061 aa28.45■■■□□ 2.14
ABCF3-202ENST00000421340 EVA1CP58658 441 aa28.44■■■□□ 2.14
ABCF3-202ENST00000421340 BTG4Q9NY30 223 aa28.44■■■□□ 2.14
ABCF3-202ENST00000421340 NLRP2Q9NX02 1062 aa28.43■■■□□ 2.14
ABCF3-202ENST00000421340 PLEKHG2Q9H7P9 1386 aa28.42■■■□□ 2.14
ABCF3-202ENST00000421340 FAM208AQ9UK61 1670 aaKnown RBP28.42■■■□□ 2.14
ABCF3-202ENST00000421340 PHACTR3Q96KR7 559 aa28.41■■■□□ 2.14
ABCF3-202ENST00000421340 RGPD5Q99666 1765 aa28.4■■■□□ 2.14
ABCF3-202ENST00000421340 CCDC27Q2M243 656 aa28.4■■■□□ 2.14
ABCF3-202ENST00000421340 CARD10Q9BWT7 1032 aa28.4■■■□□ 2.14
ABCF3-202ENST00000421340 TMPOP42166 694 aaKnown RBP28.39■■■□□ 2.14
ABCF3-202ENST00000421340 TOM1L2Q6ZVM7 507 aa28.38■■■□□ 2.13
ABCF3-202ENST00000421340 USHBP1Q8N6Y0 703 aa28.38■■■□□ 2.13
ABCF3-202ENST00000421340 SLIT2O94813 1529 aa28.38■■■□□ 2.13
ABCF3-202ENST00000421340 NFE2L2Q16236 605 aa28.37■■■□□ 2.13
ABCF3-202ENST00000421340 PHF23Q9BUL5 403 aaPredicted RBP28.37■■■□□ 2.13
ABCF3-202ENST00000421340 LARP1Q6PKG0 1096 aaKnown RBP28.36■■■□□ 2.13
ABCF3-202ENST00000421340 FNBP4Q8N3X1 1017 aaPredicted RBP28.36■■■□□ 2.13
ABCF3-202ENST00000421340 STRN4Q9NRL3 753 aa28.36■■■□□ 2.13
ABCF3-202ENST00000421340 CRB1P82279 1406 aa28.35■■■□□ 2.13
ABCF3-202ENST00000421340 LRP6O75581 1613 aa28.35■■■□□ 2.13
ABCF3-202ENST00000421340 AMOTQ4VCS5 1084 aa28.34■■■□□ 2.13
ABCF3-202ENST00000421340 NGLY1Q96IV0 654 aa28.34■■■□□ 2.13
ABCF3-202ENST00000421340 PDE3BQ13370 1112 aa28.33■■■□□ 2.13
ABCF3-202ENST00000421340 GAS2L2Q8NHY3 880 aa28.33■■■□□ 2.13
ABCF3-202ENST00000421340 ZNF521Q96K83 1311 aa28.33■■■□□ 2.13
ABCF3-202ENST00000421340 RIPK4P57078 832 aa28.32■■■□□ 2.12
ABCF3-202ENST00000421340 RAPGEF4Q8WZA2 1011 aa28.32■■■□□ 2.12
ABCF3-202ENST00000421340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.32■■■□□ 2.12
ABCF3-202ENST00000421340 PLEKHO1Q53GL0 409 aaPredicted RBP28.31■■■□□ 2.12
ABCF3-202ENST00000421340 UNC5CLQ8IV45 518 aa28.31■■■□□ 2.12
ABCF3-202ENST00000421340 NWD2Q9ULI1 1742 aa28.31■■■□□ 2.12
ABCF3-202ENST00000421340 TATP17735 454 aaPredicted RBP28.3■■■□□ 2.12
ABCF3-202ENST00000421340 LMOD3Q0VAK6 560 aa28.3■■■□□ 2.12
ABCF3-202ENST00000421340 MTHFSDQ2M296 383 aaKnown RBP28.3■■■□□ 2.12
ABCF3-202ENST00000421340 WWC1Q8IX03 1113 aa28.3■■■□□ 2.12
ABCF3-202ENST00000421340 C8orf37Q96NL8 207 aa28.3■■■□□ 2.12
ABCF3-202ENST00000421340 RRP7AQ9Y3A4 280 aaKnown RBP28.3■■■□□ 2.12
ABCF3-202ENST00000421340 SALL2Q9Y467 1007 aaPredicted RBP28.3■■■□□ 2.12
ABCF3-202ENST00000421340 RGPD2P0DJD1 1756 aa28.29■■■□□ 2.12
ABCF3-202ENST00000421340 PLCH1Q4KWH8 1693 aa28.29■■■□□ 2.12
ABCF3-202ENST00000421340 NEUROD2Q15784 382 aa28.29■■■□□ 2.12
ABCF3-202ENST00000421340 HTATSF1O43719 755 aaKnown RBP28.28■■■□□ 2.12
ABCF3-202ENST00000421340 MEX3CQ5U5Q3 659 aaKnown RBP28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms