RNA–Protein interactions for RNA: ENST00000417066.5

CCDC148-204, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best)

Gene CCDC148, Length 1,447 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-204ENST00000417066 SEPT12Q8IYM1 358 aa26.46■■□□□ 1.83
CCDC148-204ENST00000417066 SPATA31A1Q5TZJ5 1347 aa26.45■■□□□ 1.82
CCDC148-204ENST00000417066 ONECUT3O60422 494 aaPredicted RBP26.45■■□□□ 1.82
CCDC148-204ENST00000417066 COL18A1P39060 1754 aa26.44■■□□□ 1.82
CCDC148-204ENST00000417066 KIF7Q2M1P5 1343 aa26.44■■□□□ 1.82
CCDC148-204ENST00000417066 COL5A2P05997 1499 aaPredicted RBP26.44■■□□□ 1.82
CCDC148-204ENST00000417066 PANK3Q9H999 370 aa26.43■■□□□ 1.82
CCDC148-204ENST00000417066 A0A0G2JS52 829 aa26.42■■□□□ 1.82
CCDC148-204ENST00000417066 MYT1Q01538 1121 aa26.42■■□□□ 1.82
CCDC148-204ENST00000417066 UPF1Q92900 1129 aaKnown RBP eCLIP26.38■■□□□ 1.81
CCDC148-204ENST00000417066 RGPD5Q99666 1765 aa26.37■■□□□ 1.81
CCDC148-204ENST00000417066 TOM1L2Q6ZVM7 507 aa26.37■■□□□ 1.81
CCDC148-204ENST00000417066 MAP3K19Q56UN5 1328 aa26.35■■□□□ 1.81
CCDC148-204ENST00000417066 CSB-PGBD3P0DP91 1061 aa26.35■■□□□ 1.81
CCDC148-204ENST00000417066 RRS1Q15050 365 aaKnown RBP26.35■■□□□ 1.81
CCDC148-204ENST00000417066 TCP11L2Q8N4U5 519 aa26.35■■□□□ 1.81
CCDC148-204ENST00000417066 BRWD3Q6RI45 1802 aa26.35■■□□□ 1.81
CCDC148-204ENST00000417066 CRB1P82279 1406 aa26.35■■□□□ 1.81
CCDC148-204ENST00000417066 CGNL1Q0VF96 1302 aa26.35■■□□□ 1.81
CCDC148-204ENST00000417066 WDR17Q8IZU2 1322 aa26.35■■□□□ 1.81
CCDC148-204ENST00000417066 LTN1O94822 1766 aa26.34■■□□□ 1.81
CCDC148-204ENST00000417066 KIF20BQ96Q89 1820 aa26.34■■□□□ 1.81
CCDC148-204ENST00000417066 BARGINQ6ZT62 677 aa26.32■■□□□ 1.8
CCDC148-204ENST00000417066 KRT27Q7Z3Y8 459 aa26.32■■□□□ 1.8
CCDC148-204ENST00000417066 IP6K1Q92551 441 aa26.32■■□□□ 1.8
CCDC148-204ENST00000417066 WASHC2AQ641Q2 1341 aa26.32■■□□□ 1.8
CCDC148-204ENST00000417066 AMPHP49418 695 aa26.31■■□□□ 1.8
CCDC148-204ENST00000417066 CCDC7Q96M83 1385 aa26.3■■□□□ 1.8
CCDC148-204ENST00000417066 FAM182BQ5T319 152 aa26.3■■□□□ 1.8
CCDC148-204ENST00000417066 ANKRD24Q8TF21 1146 aa26.3■■□□□ 1.8
CCDC148-204ENST00000417066 THRAP3Q9Y2W1 955 aaKnown RBP26.3■■□□□ 1.8
CCDC148-204ENST00000417066 ABCC6O95255 1503 aa26.29■■□□□ 1.8
CCDC148-204ENST00000417066 ERBB3P21860 1342 aa26.29■■□□□ 1.8
CCDC148-204ENST00000417066 THSD7AQ9UPZ6 1657 aa26.29■■□□□ 1.8
CCDC148-204ENST00000417066 HOXC9P31274 260 aa26.29■■□□□ 1.8
CCDC148-204ENST00000417066 LTV1Q96GA3 475 aaPredicted RBP26.29■■□□□ 1.8
CCDC148-204ENST00000417066 CARD10Q9BWT7 1032 aa26.27■■□□□ 1.8
CCDC148-204ENST00000417066 NLRP2Q9NX02 1062 aa26.26■■□□□ 1.79
CCDC148-204ENST00000417066 EP400Q96L91 3159 aa26.26■■□□□ 1.79
CCDC148-204ENST00000417066 TNNT2P45379 298 aaPredicted RBP26.25■■□□□ 1.79
CCDC148-204ENST00000417066 KNSTRNQ9Y448 316 aa26.24■■□□□ 1.79
CCDC148-204ENST00000417066 EMILIN1Q9Y6C2 1016 aa26.24■■□□□ 1.79
CCDC148-204ENST00000417066 BLMP54132 1417 aaPredicted RBP26.24■■□□□ 1.79
CCDC148-204ENST00000417066 HSP90AB2PQ58FF8 381 aa26.22■■□□□ 1.79
CCDC148-204ENST00000417066 PPM1GO15355 546 aaPredicted RBP26.21■■□□□ 1.79
CCDC148-204ENST00000417066 PER1O15534 1290 aaPredicted RBP26.2■■□□□ 1.78
CCDC148-204ENST00000417066 PDE3BQ13370 1112 aa26.2■■□□□ 1.78
CCDC148-204ENST00000417066 RTL1A6NKG5 1358 aa26.19■■□□□ 1.78
CCDC148-204ENST00000417066 AMER1Q5JTC6 1135 aaPredicted RBP26.19■■□□□ 1.78
CCDC148-204ENST00000417066 PEAK1Q9H792 1746 aa26.18■■□□□ 1.78
CCDC148-204ENST00000417066 POLKQ9UBT6 870 aa26.18■■□□□ 1.78
CCDC148-204ENST00000417066 DDB1Q16531 1140 aa26.16■■□□□ 1.78
CCDC148-204ENST00000417066 MORC1Q86VD1 984 aa26.16■■□□□ 1.78
CCDC148-204ENST00000417066 NSD2O96028 1365 aa26.16■■□□□ 1.78
CCDC148-204ENST00000417066 FLT4P35916 1363 aa26.16■■□□□ 1.78
CCDC148-204ENST00000417066 DISP2A7MBM2 1401 aa26.15■■□□□ 1.78
CCDC148-204ENST00000417066 INSRP06213 1382 aa26.14■■□□□ 1.78
CCDC148-204ENST00000417066 ANKRD26Q9UPS8 1709 aa26.14■■□□□ 1.78
CCDC148-204ENST00000417066 PARP4Q9UKK3 1724 aaKnown RBP26.14■■□□□ 1.77
CCDC148-204ENST00000417066 CNGB1Q14028 1251 aaPredicted RBP26.14■■□□□ 1.77
CCDC148-204ENST00000417066 CDCA7Q9BWT1 371 aaPredicted RBP26.14■■□□□ 1.77
CCDC148-204ENST00000417066 NBPF6Q5VWK0 638 aa26.13■■□□□ 1.77
CCDC148-204ENST00000417066 NBPF4Q96M43 638 aa26.13■■□□□ 1.77
CCDC148-204ENST00000417066 MAP2P11137 1827 aaKnown RBP26.12■■□□□ 1.77
CCDC148-204ENST00000417066 KIF24Q5T7B8 1368 aa26.12■■□□□ 1.77
CCDC148-204ENST00000417066 CC2D1BQ5T0F9 858 aaKnown RBP26.12■■□□□ 1.77
CCDC148-204ENST00000417066 CCDC125Q86Z20 511 aa26.12■■□□□ 1.77
CCDC148-204ENST00000417066 WNK3Q9BYP7 1800 aa26.11■■□□□ 1.77
CCDC148-204ENST00000417066 IL2RBP14784 551 aa26.11■■□□□ 1.77
CCDC148-204ENST00000417066 FAM196AQ6ZSG2 479 aa26.11■■□□□ 1.77
CCDC148-204ENST00000417066 USHBP1Q8N6Y0 703 aa26.11■■□□□ 1.77
CCDC148-204ENST00000417066 LRRC37A3O60309 1634 aa26.11■■□□□ 1.77
CCDC148-204ENST00000417066 RGPD2P0DJD1 1756 aa26.1■■□□□ 1.77
CCDC148-204ENST00000417066 EXOC5O00471 708 aa26.1■■□□□ 1.77
CCDC148-204ENST00000417066 MARCH10Q8NA82 808 aaPredicted RBP26.09■■□□□ 1.77
CCDC148-204ENST00000417066 SMG6Q86US8 1419 aaKnown RBP26.08■■□□□ 1.77
CCDC148-204ENST00000417066 DEFB132Q7Z7B7 95 aa26.08■■□□□ 1.77
CCDC148-204ENST00000417066 TRIM37O94972 964 aa26.07■■□□□ 1.76
CCDC148-204ENST00000417066 SF3B2Q13435 895 aaKnown RBP26.06■■□□□ 1.76
CCDC148-204ENST00000417066 FAM208AQ9UK61 1670 aaKnown RBP26.06■■□□□ 1.76
CCDC148-204ENST00000417066 ZEB1P37275 1124 aaPredicted RBP26.05■■□□□ 1.76
CCDC148-204ENST00000417066 TNS2Q63HR2 1409 aa26.03■■□□□ 1.76
CCDC148-204ENST00000417066 EIF4A2Q14240 407 aaKnown RBP26.02■■□□□ 1.76
CCDC148-204ENST00000417066 OVOS2A0A0G2JMS6 1433 aa26.02■■□□□ 1.76
CCDC148-204ENST00000417066 EYA1Q99502 592 aa26.01■■□□□ 1.75
CCDC148-204ENST00000417066 MEGF6O75095 1541 aa26■■□□□ 1.75
CCDC148-204ENST00000417066 NPC1L1Q9UHC9 1359 aa25.99■■□□□ 1.75
CCDC148-204ENST00000417066 PTF1AQ7RTS3 328 aa25.99■■□□□ 1.75
CCDC148-204ENST00000417066 DDX54Q8TDD1 881 aaKnown RBP25.98■■□□□ 1.75
CCDC148-204ENST00000417066 MTHFSP49914 203 aa25.97■■□□□ 1.75
CCDC148-204ENST00000417066 EN1Q05925 392 aaPredicted RBP25.97■■□□□ 1.75
CCDC148-204ENST00000417066 RAPGEF4Q8WZA2 1011 aa25.97■■□□□ 1.75
CCDC148-204ENST00000417066 APBA3O96018 575 aa25.97■■□□□ 1.75
CCDC148-204ENST00000417066 BAG6P46379 1132 aa25.97■■□□□ 1.75
CCDC148-204ENST00000417066 ZCRB1Q8TBF4 217 aaKnown RBP25.96■■□□□ 1.75
CCDC148-204ENST00000417066 RGPD1P0DJD0 1748 aa25.95■■□□□ 1.74
CCDC148-204ENST00000417066 TATP17735 454 aaPredicted RBP25.95■■□□□ 1.74
CCDC148-204ENST00000417066 TNS1Q9HBL0 1735 aaKnown RBP25.94■■□□□ 1.74
CCDC148-204ENST00000417066 ACSBG1Q96GR2 724 aa25.93■■□□□ 1.74
CCDC148-204ENST00000417066 BCL9O00512 1426 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms