RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 MYOM1P52179 1685 aa23.73■■□□□ 1.39
CDC42EP1-202ENST00000415670 NLRP6P59044 892 aa23.73■■□□□ 1.39
CDC42EP1-202ENST00000415670 DDB1Q16531 1140 aa23.73■■□□□ 1.39
CDC42EP1-202ENST00000415670 TOM1L2Q6ZVM7 507 aa23.73■■□□□ 1.39
CDC42EP1-202ENST00000415670 CABP1Q9NZU7 370 aa23.73■■□□□ 1.39
CDC42EP1-202ENST00000415670 COL18A1P39060 1754 aa23.73■■□□□ 1.39
CDC42EP1-202ENST00000415670 TIMELESSQ9UNS1 1208 aa23.72■■□□□ 1.39
CDC42EP1-202ENST00000415670 TONSLQ96HA7 1378 aa23.72■■□□□ 1.39
CDC42EP1-202ENST00000415670 RGPD5Q99666 1765 aa23.71■■□□□ 1.39
CDC42EP1-202ENST00000415670 ZNF784Q8NCA9 323 aaPredicted RBP23.71■■□□□ 1.39
CDC42EP1-202ENST00000415670 DCAF8L1A6NGE4 600 aa23.69■■□□□ 1.38
CDC42EP1-202ENST00000415670 SOX12O15370 315 aa23.69■■□□□ 1.38
CDC42EP1-202ENST00000415670 AATKQ6ZMQ8 1374 aa23.68■■□□□ 1.38
CDC42EP1-202ENST00000415670 STAC3Q96MF2 364 aa23.68■■□□□ 1.38
CDC42EP1-202ENST00000415670 TXNRD1Q16881 649 aa23.67■■□□□ 1.38
CDC42EP1-202ENST00000415670 FHDC1Q9C0D6 1143 aaPredicted RBP23.67■■□□□ 1.38
CDC42EP1-202ENST00000415670 ZEB1P37275 1124 aaPredicted RBP23.66■■□□□ 1.38
CDC42EP1-202ENST00000415670 L3MBTL2Q969R5 705 aa23.66■■□□□ 1.38
CDC42EP1-202ENST00000415670 RGPD3A6NKT7 1758 aaPredicted RBP23.65■■□□□ 1.38
CDC42EP1-202ENST00000415670 RGPD4Q7Z3J3 1758 aa23.65■■□□□ 1.38
CDC42EP1-202ENST00000415670 SLIT3O75094 1523 aa23.65■■□□□ 1.38
CDC42EP1-202ENST00000415670 SYT17Q9BSW7 474 aa23.65■■□□□ 1.38
CDC42EP1-202ENST00000415670 USP6P35125 1406 aa23.65■■□□□ 1.38
CDC42EP1-202ENST00000415670 WNK3Q9BYP7 1800 aa23.64■■□□□ 1.38
CDC42EP1-202ENST00000415670 PIK3C2AO00443 1686 aa23.64■■□□□ 1.37
CDC42EP1-202ENST00000415670 WDR17Q8IZU2 1322 aa23.63■■□□□ 1.37
CDC42EP1-202ENST00000415670 CENPJQ9HC77 1338 aaPredicted RBP23.62■■□□□ 1.37
CDC42EP1-202ENST00000415670 SLC15A2Q16348 729 aa23.62■■□□□ 1.37
CDC42EP1-202ENST00000415670 AKAP12Q02952 1782 aa23.61■■□□□ 1.37
CDC42EP1-202ENST00000415670 ARHGEF25Q86VW2 580 aa23.61■■□□□ 1.37
CDC42EP1-202ENST00000415670 ACSBG1Q96GR2 724 aa23.61■■□□□ 1.37
CDC42EP1-202ENST00000415670 SGIP1Q9BQI5 828 aa23.61■■□□□ 1.37
CDC42EP1-202ENST00000415670 STK32BQ9NY57 414 aa23.61■■□□□ 1.37
CDC42EP1-202ENST00000415670 C11orf95C9JLR9 678 aaPredicted RBP23.6■■□□□ 1.37
CDC42EP1-202ENST00000415670 KIAA1210Q9ULL0 1709 aa23.59■■□□□ 1.37
CDC42EP1-202ENST00000415670 QRICH2Q9H0J4 1663 aa23.58■■□□□ 1.37
CDC42EP1-202ENST00000415670 CSB-PGBD3P0DP91 1061 aa23.58■■□□□ 1.37
CDC42EP1-202ENST00000415670 CARD10Q9BWT7 1032 aa23.57■■□□□ 1.36
CDC42EP1-202ENST00000415670 CPSF1Q10570 1443 aaKnown RBP23.57■■□□□ 1.36
CDC42EP1-202ENST00000415670 EXOC5O00471 708 aa23.56■■□□□ 1.36
CDC42EP1-202ENST00000415670 TTC21BQ7Z4L5 1316 aa23.55■■□□□ 1.36
CDC42EP1-202ENST00000415670 BCL9O00512 1426 aa23.54■■□□□ 1.36
CDC42EP1-202ENST00000415670 SENP3-EIF4A1A0A087X0R7 540 aa23.54■■□□□ 1.36
CDC42EP1-202ENST00000415670 ZNF827Q17R98 1081 aa23.53■■□□□ 1.36
CDC42EP1-202ENST00000415670 MTFR1LQ9H019 292 aa23.53■■□□□ 1.36
CDC42EP1-202ENST00000415670 BRD4O60885 1362 aaPredicted RBP23.52■■□□□ 1.36
CDC42EP1-202ENST00000415670 CHD4Q14839 1912 aa23.51■■□□□ 1.35
CDC42EP1-202ENST00000415670 ARXQ96QS3 562 aa23.51■■□□□ 1.35
CDC42EP1-202ENST00000415670 CDCA7Q9BWT1 371 aaPredicted RBP23.51■■□□□ 1.35
CDC42EP1-202ENST00000415670 LRRC4BQ9NT99 713 aa23.51■■□□□ 1.35
CDC42EP1-202ENST00000415670 C1QTNF8P60827 252 aa23.5■■□□□ 1.35
CDC42EP1-202ENST00000415670 GOLGB1Q14789 3259 aaKnown RBP23.5■■□□□ 1.35
CDC42EP1-202ENST00000415670 KAT6BQ8WYB5 2073 aa23.5■■□□□ 1.35
CDC42EP1-202ENST00000415670 TRPM1Q7Z4N2 1603 aa23.49■■□□□ 1.35
CDC42EP1-202ENST00000415670 KCNQ4P56696 695 aa23.48■■□□□ 1.35
CDC42EP1-202ENST00000415670 NFAT5O94916 1531 aa23.48■■□□□ 1.35
CDC42EP1-202ENST00000415670 NHSQ6T4R5 1651 aa23.45■■□□□ 1.34
CDC42EP1-202ENST00000415670 PAPPAQ13219 1627 aa23.45■■□□□ 1.34
CDC42EP1-202ENST00000415670 KCNH5Q8NCM2 988 aa23.45■■□□□ 1.34
CDC42EP1-202ENST00000415670 BTAF1O14981 1849 aa23.45■■□□□ 1.34
CDC42EP1-202ENST00000415670 TNS2Q63HR2 1409 aa23.44■■□□□ 1.34
CDC42EP1-202ENST00000415670 EVC2Q86UK5 1308 aa23.44■■□□□ 1.34
CDC42EP1-202ENST00000415670 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.44■■□□□ 1.34
CDC42EP1-202ENST00000415670 KLHL34Q8N239 644 aa23.44■■□□□ 1.34
CDC42EP1-202ENST00000415670 NLRP2Q9NX02 1062 aa23.44■■□□□ 1.34
CDC42EP1-202ENST00000415670 GPR162Q16538 588 aa23.42■■□□□ 1.34
CDC42EP1-202ENST00000415670 NME9Q86XW9 330 aa23.42■■□□□ 1.34
CDC42EP1-202ENST00000415670 PELP1Q8IZL8 1130 aaKnown RBP23.41■■□□□ 1.34
CDC42EP1-202ENST00000415670 ZNF692Q9BU19 519 aaPredicted RBP23.41■■□□□ 1.34
CDC42EP1-202ENST00000415670 CCDC7Q96M83 1385 aa23.4■■□□□ 1.34
CDC42EP1-202ENST00000415670 NLGN2Q8NFZ4 835 aa23.4■■□□□ 1.34
CDC42EP1-202ENST00000415670 AKT1S1Q96B36 256 aa23.4■■□□□ 1.34
CDC42EP1-202ENST00000415670 KTN1Q86UP2 1357 aaKnown RBP23.4■■□□□ 1.34
CDC42EP1-202ENST00000415670 CEP350Q5VT06 3117 aa23.39■■□□□ 1.34
CDC42EP1-202ENST00000415670 TTC21AQ8NDW8 1320 aa23.38■■□□□ 1.33
CDC42EP1-202ENST00000415670 IL2RBP14784 551 aa23.37■■□□□ 1.33
CDC42EP1-202ENST00000415670 ANKRD24Q8TF21 1146 aa23.37■■□□□ 1.33
CDC42EP1-202ENST00000415670 ERBB3P21860 1342 aa23.36■■□□□ 1.33
CDC42EP1-202ENST00000415670 ABCC6O95255 1503 aa23.36■■□□□ 1.33
CDC42EP1-202ENST00000415670 PNPLA7Q6ZV29 1317 aa23.35■■□□□ 1.33
CDC42EP1-202ENST00000415670 DDX54Q8TDD1 881 aaKnown RBP23.35■■□□□ 1.33
CDC42EP1-202ENST00000415670 TUBGCP6Q96RT7 1819 aa23.34■■□□□ 1.33
CDC42EP1-202ENST00000415670 MAP3K5Q99683 1374 aa23.34■■□□□ 1.33
CDC42EP1-202ENST00000415670 LTN1O94822 1766 aa23.34■■□□□ 1.33
CDC42EP1-202ENST00000415670 CD163L1Q9NR16 1453 aa23.32■■□□□ 1.32
CDC42EP1-202ENST00000415670 ROCK2O75116 1388 aaKnown RBP23.32■■□□□ 1.32
CDC42EP1-202ENST00000415670 YBX3P16989 372 aaKnown RBP eCLIP23.32■■□□□ 1.32
CDC42EP1-202ENST00000415670 FBLN1P23142 703 aa23.32■■□□□ 1.32
CDC42EP1-202ENST00000415670 LTV1Q96GA3 475 aaPredicted RBP23.32■■□□□ 1.32
CDC42EP1-202ENST00000415670 MON2Q7Z3U7 1717 aa23.31■■□□□ 1.32
CDC42EP1-202ENST00000415670 SBNO2Q9Y2G9 1366 aa23.3■■□□□ 1.32
CDC42EP1-202ENST00000415670 SLC12A5Q9H2X9 1139 aa23.3■■□□□ 1.32
CDC42EP1-202ENST00000415670 USP31Q70CQ4 1352 aa23.29■■□□□ 1.32
CDC42EP1-202ENST00000415670 GIGYF1O75420 1035 aaPredicted RBP23.29■■□□□ 1.32
CDC42EP1-202ENST00000415670 PRIM1P49642 420 aaKnown RBP23.29■■□□□ 1.32
CDC42EP1-202ENST00000415670 SHANK3Q9BYB0 1731 aa23.29■■□□□ 1.32
CDC42EP1-202ENST00000415670 TFCP2L1Q9NZI6 479 aa23.28■■□□□ 1.32
CDC42EP1-202ENST00000415670 COL24A1Q17RW2 1714 aa23.28■■□□□ 1.32
CDC42EP1-202ENST00000415670 TMC1Q8TDI8 760 aa23.27■■□□□ 1.32
CDC42EP1-202ENST00000415670 SYTL4Q96C24 671 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms