RNA–Protein interactions for RNA: ENST00000411463.2

R3HCC1-202, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene R3HCC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-202ENST00000411463 COL5A2P05997 1499 aaPredicted RBP32.5■■■□□ 2.79
R3HCC1-202ENST00000411463 PANK3Q9H999 370 aa32.5■■■□□ 2.79
R3HCC1-202ENST00000411463 FAM98CQ17RN3 349 aaKnown RBP32.48■■■□□ 2.79
R3HCC1-202ENST00000411463 SEPT12Q8IYM1 358 aa32.48■■■□□ 2.79
R3HCC1-202ENST00000411463 USP35Q9P2H5 1018 aa32.47■■■□□ 2.79
R3HCC1-202ENST00000411463 CGNL1Q0VF96 1302 aa32.46■■■□□ 2.79
R3HCC1-202ENST00000411463 COL18A1P39060 1754 aa32.46■■■□□ 2.79
R3HCC1-202ENST00000411463 A0A0G2JS52 829 aa32.44■■■□□ 2.78
R3HCC1-202ENST00000411463 MYT1Q01538 1121 aa32.44■■■□□ 2.78
R3HCC1-202ENST00000411463 ABCC6O95255 1503 aa32.43■■■□□ 2.78
R3HCC1-202ENST00000411463 FBLN1P23142 703 aa32.42■■■□□ 2.78
R3HCC1-202ENST00000411463 WDR17Q8IZU2 1322 aa32.41■■■□□ 2.78
R3HCC1-202ENST00000411463 CRB1P82279 1406 aa32.41■■■□□ 2.78
R3HCC1-202ENST00000411463 TOM1L2Q6ZVM7 507 aa32.41■■■□□ 2.78
R3HCC1-202ENST00000411463 TCP11L2Q8N4U5 519 aa32.41■■■□□ 2.78
R3HCC1-202ENST00000411463 CCDC7Q96M83 1385 aa32.39■■■□□ 2.78
R3HCC1-202ENST00000411463 MAP3K19Q56UN5 1328 aa32.39■■■□□ 2.78
R3HCC1-202ENST00000411463 CSB-PGBD3P0DP91 1061 aa32.39■■■□□ 2.78
R3HCC1-202ENST00000411463 BARGINQ6ZT62 677 aa32.39■■■□□ 2.78
R3HCC1-202ENST00000411463 KIF20BQ96Q89 1820 aa32.39■■■□□ 2.78
R3HCC1-202ENST00000411463 THRAP3Q9Y2W1 955 aaKnown RBP32.38■■■□□ 2.77
R3HCC1-202ENST00000411463 WASHC2AQ641Q2 1341 aa32.37■■■□□ 2.77
R3HCC1-202ENST00000411463 IP6K1Q92551 441 aa32.37■■■□□ 2.77
R3HCC1-202ENST00000411463 LTN1O94822 1766 aa32.36■■■□□ 2.77
R3HCC1-202ENST00000411463 AMPHP49418 695 aa32.35■■■□□ 2.77
R3HCC1-202ENST00000411463 RRS1Q15050 365 aaKnown RBP32.35■■■□□ 2.77
R3HCC1-202ENST00000411463 UPF1Q92900 1129 aaKnown RBP eCLIP32.35■■■□□ 2.775e-8■■■■■ 31.3
R3HCC1-202ENST00000411463 ERBB3P21860 1342 aa32.34■■■□□ 2.77
R3HCC1-202ENST00000411463 KRT27Q7Z3Y8 459 aa32.34■■■□□ 2.77
R3HCC1-202ENST00000411463 KNSTRNQ9Y448 316 aa32.34■■■□□ 2.77
R3HCC1-202ENST00000411463 BLMP54132 1417 aaPredicted RBP32.34■■■□□ 2.77
R3HCC1-202ENST00000411463 HOXC9P31274 260 aa32.32■■■□□ 2.76
R3HCC1-202ENST00000411463 ANKRD24Q8TF21 1146 aa32.32■■■□□ 2.76
R3HCC1-202ENST00000411463 CARD10Q9BWT7 1032 aa32.32■■■□□ 2.76
R3HCC1-202ENST00000411463 RGPD5Q99666 1765 aa32.31■■■□□ 2.76
R3HCC1-202ENST00000411463 THSD7AQ9UPZ6 1657 aa32.31■■■□□ 2.76
R3HCC1-202ENST00000411463 RTL1A6NKG5 1358 aa32.29■■■□□ 2.76
R3HCC1-202ENST00000411463 NSD2O96028 1365 aa32.28■■■□□ 2.76
R3HCC1-202ENST00000411463 NLRP2Q9NX02 1062 aa32.28■■■□□ 2.76
R3HCC1-202ENST00000411463 BRWD3Q6RI45 1802 aa32.27■■■□□ 2.76
R3HCC1-202ENST00000411463 ZEB1P37275 1124 aaPredicted RBP32.26■■■□□ 2.75
R3HCC1-202ENST00000411463 LTV1Q96GA3 475 aaPredicted RBP32.26■■■□□ 2.75
R3HCC1-202ENST00000411463 KIF24Q5T7B8 1368 aa32.24■■■□□ 2.75
R3HCC1-202ENST00000411463 PER1O15534 1290 aaPredicted RBP32.23■■■□□ 2.75
R3HCC1-202ENST00000411463 TNNT2P45379 298 aaPredicted RBP32.23■■■□□ 2.75
R3HCC1-202ENST00000411463 CDCA7Q9BWT1 371 aaPredicted RBP32.23■■■□□ 2.75
R3HCC1-202ENST00000411463 EMILIN1Q9Y6C2 1016 aa32.23■■■□□ 2.75
R3HCC1-202ENST00000411463 PDE3BQ13370 1112 aa32.22■■■□□ 2.75
R3HCC1-202ENST00000411463 AMER1Q5JTC6 1135 aaPredicted RBP32.22■■■□□ 2.75
R3HCC1-202ENST00000411463 FLT4P35916 1363 aa32.21■■■□□ 2.75
R3HCC1-202ENST00000411463 MORC1Q86VD1 984 aa32.21■■■□□ 2.75
R3HCC1-202ENST00000411463 EP400Q96L91 3159 aa32.2■■■□□ 2.75
R3HCC1-202ENST00000411463 PPM1GO15355 546 aaPredicted RBP32.2■■■□□ 2.75
R3HCC1-202ENST00000411463 HSP90AB2PQ58FF8 381 aa32.2■■■□□ 2.75
R3HCC1-202ENST00000411463 FAM182BQ5T319 152 aa32.19■■■□□ 2.74
R3HCC1-202ENST00000411463 INSRP06213 1382 aa32.19■■■□□ 2.74
R3HCC1-202ENST00000411463 POLKQ9UBT6 870 aa32.18■■■□□ 2.74
R3HCC1-202ENST00000411463 ANKRD26Q9UPS8 1709 aa32.18■■■□□ 2.74
R3HCC1-202ENST00000411463 DDB1Q16531 1140 aa32.16■■■□□ 2.74
R3HCC1-202ENST00000411463 CCDC125Q86Z20 511 aa32.16■■■□□ 2.74
R3HCC1-202ENST00000411463 DISP2A7MBM2 1401 aa32.15■■■□□ 2.74
R3HCC1-202ENST00000411463 SMG6Q86US8 1419 aaKnown RBP32.15■■■□□ 2.74
R3HCC1-202ENST00000411463 PEAK1Q9H792 1746 aa32.15■■■□□ 2.74
R3HCC1-202ENST00000411463 PARP4Q9UKK3 1724 aaKnown RBP32.14■■■□□ 2.74
R3HCC1-202ENST00000411463 IL2RBP14784 551 aa32.12■■■□□ 2.73
R3HCC1-202ENST00000411463 FAM196AQ6ZSG2 479 aa32.11■■■□□ 2.73
R3HCC1-202ENST00000411463 EXOC5O00471 708 aa32.1■■■□□ 2.73
R3HCC1-202ENST00000411463 FAM208AQ9UK61 1670 aaKnown RBP32.1■■■□□ 2.73
R3HCC1-202ENST00000411463 CC2D1BQ5T0F9 858 aaKnown RBP32.1■■■□□ 2.73
R3HCC1-202ENST00000411463 NBPF6Q5VWK0 638 aa32.1■■■□□ 2.73
R3HCC1-202ENST00000411463 NBPF4Q96M43 638 aa32.1■■■□□ 2.73
R3HCC1-202ENST00000411463 LRRC37A3O60309 1634 aa32.08■■■□□ 2.73
R3HCC1-202ENST00000411463 WNK3Q9BYP7 1800 aa32.07■■■□□ 2.72
R3HCC1-202ENST00000411463 NPC1L1Q9UHC9 1359 aa32.07■■■□□ 2.72
R3HCC1-202ENST00000411463 SF3B2Q13435 895 aaKnown RBP32.06■■■□□ 2.72
R3HCC1-202ENST00000411463 MAP2P11137 1827 aaKnown RBP32.06■■■□□ 2.72
R3HCC1-202ENST00000411463 USHBP1Q8N6Y0 703 aa32.03■■■□□ 2.72
R3HCC1-202ENST00000411463 MARCH10Q8NA82 808 aaPredicted RBP32.03■■■□□ 2.72
R3HCC1-202ENST00000411463 CNGB1Q14028 1251 aaPredicted RBP32.03■■■□□ 2.72
R3HCC1-202ENST00000411463 OVOS2A0A0G2JMS6 1433 aa32.02■■■□□ 2.72
R3HCC1-202ENST00000411463 TNS2Q63HR2 1409 aa32.02■■■□□ 2.72
R3HCC1-202ENST00000411463 TRIM37O94972 964 aa31.99■■■□□ 2.71
R3HCC1-202ENST00000411463 EIF4A2Q14240 407 aaKnown RBP31.98■■■□□ 2.71
R3HCC1-202ENST00000411463 RGPD2P0DJD1 1756 aa31.98■■■□□ 2.71
R3HCC1-202ENST00000411463 RAPGEF4Q8WZA2 1011 aa31.97■■■□□ 2.71
R3HCC1-202ENST00000411463 EYA1Q99502 592 aa31.96■■■□□ 2.71
R3HCC1-202ENST00000411463 DEFB132Q7Z7B7 95 aa31.95■■■□□ 2.7
R3HCC1-202ENST00000411463 MEGF6O75095 1541 aa31.94■■■□□ 2.7
R3HCC1-202ENST00000411463 MTHFSP49914 203 aa31.94■■■□□ 2.7
R3HCC1-202ENST00000411463 TATP17735 454 aaPredicted RBP31.93■■■□□ 2.7
R3HCC1-202ENST00000411463 BAG6P46379 1132 aa31.93■■■□□ 2.7
R3HCC1-202ENST00000411463 BCL9O00512 1426 aa31.93■■■□□ 2.7
R3HCC1-202ENST00000411463 ZCRB1Q8TBF4 217 aaKnown RBP31.92■■■□□ 2.7
R3HCC1-202ENST00000411463 DDX54Q8TDD1 881 aaKnown RBP31.91■■■□□ 2.7
R3HCC1-202ENST00000411463 NCAPD2Q15021 1401 aa31.9■■■□□ 2.7
R3HCC1-202ENST00000411463 RGPD1P0DJD0 1748 aa31.9■■■□□ 2.7
R3HCC1-202ENST00000411463 APBA3O96018 575 aa31.88■■■□□ 2.69
R3HCC1-202ENST00000411463 IGSF1Q8N6C5 1336 aa31.87■■■□□ 2.69
R3HCC1-202ENST00000411463 DDX10Q13206 875 aaKnown RBP31.86■■■□□ 2.69
R3HCC1-202ENST00000411463 IL13P35225 146 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms