RNA–Protein interactions for RNA: ENST00000387446.1

RNU6ATAC4P-201, Transcript of RNA, U6atac small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU6ATAC4P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC4P-201ENST00000387446 LRBAP50851 2863 aa0.84□□□□□ -2.27
RNU6ATAC4P-201ENST00000387446 NUP188Q5SRE5 1749 aa0.84□□□□□ -2.27
RNU6ATAC4P-201ENST00000387446 PRRC2CQ9Y520 2896 aaKnown RBP0.84□□□□□ -2.27
RNU6ATAC4P-201ENST00000387446 USP9YO00507 2555 aaPredicted RBP0.84□□□□□ -2.27
RNU6ATAC4P-201ENST00000387446 COL12A1Q99715 3063 aa0.84□□□□□ -2.27
RNU6ATAC4P-201ENST00000387446 SSPOA2VEC9 5147 aa0.84□□□□□ -2.27
RNU6ATAC4P-201ENST00000387446 A0A0G2JK05 382 aa0.84□□□□□ -2.27
RNU6ATAC4P-201ENST00000387446 LOC101059948A0A1B0GTJ6 334 aa0.84□□□□□ -2.27
RNU6ATAC4P-201ENST00000387446 SMIM22K7EJ46 135 aa0.84□□□□□ -2.27
RNU6ATAC4P-201ENST00000387446 NPM1P06748 294 aaKnown RBP eCLIP0.84□□□□□ -2.27
RNU6ATAC4P-201ENST00000387446 PTGER2P43116 358 aa0.84□□□□□ -2.27
RNU6ATAC4P-201ENST00000387446 PKD2Q13563 968 aa0.84□□□□□ -2.27
RNU6ATAC4P-201ENST00000387446 LRCH2Q5VUJ6 765 aa0.84□□□□□ -2.27
RNU6ATAC4P-201ENST00000387446 LRSAM1Q6UWE0 723 aa0.84□□□□□ -2.27
RNU6ATAC4P-201ENST00000387446 SMC1BQ8NDV3 1235 aa0.84□□□□□ -2.27
RNU6ATAC4P-201ENST00000387446 GLIS3Q8NEA6 775 aa0.84□□□□□ -2.27
RNU6ATAC4P-201ENST00000387446 UHRF1Q96T88 793 aaPredicted RBP0.84□□□□□ -2.27
RNU6ATAC4P-201ENST00000387446 ZCCHC11Q5TAX3 1644 aaKnown RBP0.84□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 LRRC9Q6ZRR7 1453 aa0.84□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 WDR87Q6ZQQ6 2873 aa0.84□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 LTBP3Q9NS15 1303 aa0.84□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 GVINP1Q7Z2Y8 2422 aa0.84□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 TRPM3Q9HCF6 1732 aaPredicted RBP0.84□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 GLI3P10071 1580 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 OTOGQ6ZRI0 2925 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 MYO15AQ9UKN7 3530 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 COL22A1Q8NFW1 1626 aaPredicted RBP0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 HIVEP2P31629 2446 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 PRR33A8MZF0 331 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 ADRB1P08588 477 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 LMOD2Q6P5Q4 547 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 Q7L0L9 218 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 ADAMTS19Q8TE59 1207 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 CHAMP1Q96JM3 812 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 PHF12Q96QT6 1004 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 PHOX2BQ99453 314 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 C11orf16Q9NQ32 467 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 CREBZFQ9NS37 354 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 MKRN1Q9UHC7 482 aaKnown RBP0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 TELO2Q9Y4R8 837 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 TNS1Q9HBL0 1735 aaKnown RBP0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 ARAP3Q8WWN8 1544 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 KDM5DQ9BY66 1539 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 ZC3H4Q9UPT8 1303 aaKnown RBP0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 SETD1BQ9UPS6 1966 aaKnown RBP0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 NIPBLQ6KC79 2804 aaeCLIP0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 ABCA8O94911 1581 aa0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 CEP170BQ9Y4F5 1589 aaPredicted RBP0.83□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 BRWD3Q6RI45 1802 aa0.82□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 IFT140Q96RY7 1462 aa0.82□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 SPTA1P02549 2419 aa0.82□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 POTECB2RU33 542 aa0.82□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 DSG3P32926 999 aa0.82□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 EN1Q05925 392 aaPredicted RBP0.82□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 SOWAHCQ53LP3 525 aaPredicted RBP0.82□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 TMC4Q7Z404 712 aa0.82□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 LSM14AQ8ND56 463 aaKnown RBP0.82□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 MAFAQ8NHW3 353 aaPredicted RBP0.82□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 SPATA3Q8NHX4 192 aa0.82□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 CBX8Q9HC52 389 aa0.82□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 SSC5DA1L4H1 1573 aa0.82□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 NOTCH3Q9UM47 2321 aa0.82□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 SHROOM2Q13796 1616 aa0.82□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 CEP250Q9BV73 2442 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 ZC3H13Q5T200 1668 aaKnown RBP0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 TNRC6CQ9HCJ0 1690 aaKnown RBP0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 FANCAO15360 1455 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 NRXN1Q9ULB1 1477 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 RAPGEF2Q9Y4G8 1499 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 TENM3Q9P273 2699 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 H0YGN5 161 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 CA12O43570 354 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 TOP3BO95985 862 aaKnown RBP0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 PLA2G2AP14555 144 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 ELAVL4P26378 380 aaKnown RBP0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 LTKP29376 864 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 FMR1Q06787 632 aaKnown RBP eCLIP0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 TCF15Q12870 199 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 PUM1Q14671 1186 aaKnown RBP eCLIP0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 AAK1Q2M2I8 961 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 NBPF8Q3BBV2 869 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 KRTAP20-1Q3LI63 56 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 GUCD1Q96NT3 240 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 BEGAINQ9BUH8 593 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 EPHX3Q9H6B9 360 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 NMRK2Q9NPI5 230 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 TRPC5Q9UL62 973 aaPredicted RBP0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 LHX6Q9UPM6 363 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 FRYLO94915 3013 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 SPENQ96T58 3664 aaKnown RBP0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 FSIP2Q5CZC0 6907 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 NRXN3Q9Y4C0 1643 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 CSMD2Q7Z408 3487 aa0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.81□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 RBBP6Q7Z6E9 1792 aaKnown RBP0.8□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 NEBP20929 6669 aa0.8□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 TENM2Q9NT68 2774 aa0.8□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 NCAPD3P42695 1498 aa0.8□□□□□ -2.28
RNU6ATAC4P-201ENST00000387446 FGD5Q6ZNL6 1462 aa0.8□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms