RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 RRS1Q15050 365 aaKnown RBP23.97■■□□□ 1.43
CD9-202ENST00000382515 ABCA3Q99758 1704 aa23.96■■□□□ 1.43
CD9-202ENST00000382515 BLMP54132 1417 aaPredicted RBP23.96■■□□□ 1.43
CD9-202ENST00000382515 FBLN1P23142 703 aa23.96■■□□□ 1.43
CD9-202ENST00000382515 POTEAQ6S8J7 498 aa23.96■■□□□ 1.43
CD9-202ENST00000382515 STRN4Q9NRL3 753 aa23.95■■□□□ 1.42
CD9-202ENST00000382515 ATRNO75882 1429 aa23.94■■□□□ 1.42
CD9-202ENST00000382515 FLT4P35916 1363 aa23.94■■□□□ 1.42
CD9-202ENST00000382515 TNNT2P45379 298 aaPredicted RBP23.94■■□□□ 1.42
CD9-202ENST00000382515 THRAP3Q9Y2W1 955 aaKnown RBP23.94■■□□□ 1.42
CD9-202ENST00000382515 WDR17Q8IZU2 1322 aa23.93■■□□□ 1.42
CD9-202ENST00000382515 ILDR2Q71H61 639 aa23.93■■□□□ 1.42
CD9-202ENST00000382515 CCDC9Q9Y3X0 531 aaKnown RBP23.93■■□□□ 1.42
CD9-202ENST00000382515 MARF1Q9Y4F3 1742 aaKnown RBP23.93■■□□□ 1.42
CD9-202ENST00000382515 CAMTA1Q9Y6Y1 1673 aa23.92■■□□□ 1.42
CD9-202ENST00000382515 SPATA31A5Q5VU36 1347 aa23.92■■□□□ 1.42
CD9-202ENST00000382515 SPATA31A7Q8IWB4 1347 aa23.92■■□□□ 1.42
CD9-202ENST00000382515 ONECUT3O60422 494 aaPredicted RBP23.92■■□□□ 1.42
CD9-202ENST00000382515 CSB-PGBD3P0DP91 1061 aa23.92■■□□□ 1.42
CD9-202ENST00000382515 RALBP1Q15311 655 aa23.92■■□□□ 1.42
CD9-202ENST00000382515 INSRP06213 1382 aa23.91■■□□□ 1.42
CD9-202ENST00000382515 ERBB3P21860 1342 aa23.91■■□□□ 1.42
CD9-202ENST00000382515 PPM1GO15355 546 aaPredicted RBP23.91■■□□□ 1.42
CD9-202ENST00000382515 ANKRD24Q8TF21 1146 aa23.91■■□□□ 1.42
CD9-202ENST00000382515 CARD10Q9BWT7 1032 aa23.91■■□□□ 1.42
CD9-202ENST00000382515 EMILIN1Q9Y6C2 1016 aa23.91■■□□□ 1.42
CD9-202ENST00000382515 NWD2Q9ULI1 1742 aa23.9■■□□□ 1.42
CD9-202ENST00000382515 COL5A2P05997 1499 aaPredicted RBP23.9■■□□□ 1.42
CD9-202ENST00000382515 KIF20BQ96Q89 1820 aa23.9■■□□□ 1.42
CD9-202ENST00000382515 LARP1Q6PKG0 1096 aaKnown RBP23.9■■□□□ 1.42
CD9-202ENST00000382515 TOM1L2Q6ZVM7 507 aa23.9■■□□□ 1.42
CD9-202ENST00000382515 SPATA31A1Q5TZJ5 1347 aa23.89■■□□□ 1.42
CD9-202ENST00000382515 HSP90AB2PQ58FF8 381 aa23.89■■□□□ 1.41
CD9-202ENST00000382515 BARGINQ6ZT62 677 aa23.88■■□□□ 1.41
CD9-202ENST00000382515 TCP11L2Q8N4U5 519 aa23.88■■□□□ 1.41
CD9-202ENST00000382515 CDCA7Q9BWT1 371 aaPredicted RBP23.88■■□□□ 1.41
CD9-202ENST00000382515 CRB1P82279 1406 aa23.87■■□□□ 1.41
CD9-202ENST00000382515 MTHFSP49914 203 aa23.87■■□□□ 1.41
CD9-202ENST00000382515 LMO7Q8WWI1 1683 aa23.86■■□□□ 1.41
CD9-202ENST00000382515 SMG6Q86US8 1419 aaKnown RBP23.85■■□□□ 1.41
CD9-202ENST00000382515 NLRP2Q9NX02 1062 aa23.85■■□□□ 1.41
CD9-202ENST00000382515 COL18A1P39060 1754 aa23.84■■□□□ 1.41
CD9-202ENST00000382515 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.84■■□□□ 1.41
CD9-202ENST00000382515 PARD3Q8TEW0 1356 aa23.83■■□□□ 1.41
CD9-202ENST00000382515 CNGB1Q14028 1251 aaPredicted RBP23.83■■□□□ 1.41
CD9-202ENST00000382515 CDK12Q9NYV4 1490 aaPredicted RBP23.82■■□□□ 1.4
CD9-202ENST00000382515 PPP2R1AP30153 589 aa23.82■■□□□ 1.4
CD9-202ENST00000382515 LTV1Q96GA3 475 aaPredicted RBP23.82■■□□□ 1.4
CD9-202ENST00000382515 CFAP53Q96M91 514 aa23.82■■□□□ 1.4
CD9-202ENST00000382515 ANKRD26Q9UPS8 1709 aa23.81■■□□□ 1.4
CD9-202ENST00000382515 PLCH1Q4KWH8 1693 aa23.81■■□□□ 1.4
CD9-202ENST00000382515 USP35Q9P2H5 1018 aa23.81■■□□□ 1.4
CD9-202ENST00000382515 SOCS7O14512 581 aa23.8■■□□□ 1.4
CD9-202ENST00000382515 FAM98CQ17RN3 349 aaKnown RBP23.79■■□□□ 1.4
CD9-202ENST00000382515 EIF4A2Q14240 407 aaKnown RBP23.78■■□□□ 1.4
CD9-202ENST00000382515 PRKRIP1Q9H875 184 aaPredicted RBP23.78■■□□□ 1.4
CD9-202ENST00000382515 DIAPH1O60610 1272 aaKnown RBP23.77■■□□□ 1.4
CD9-202ENST00000382515 NBPF6Q5VWK0 638 aa23.77■■□□□ 1.4
CD9-202ENST00000382515 SEPT12Q8IYM1 358 aa23.77■■□□□ 1.4
CD9-202ENST00000382515 NBPF4Q96M43 638 aa23.77■■□□□ 1.4
CD9-202ENST00000382515 NRAPQ86VF7 1730 aa23.76■■□□□ 1.39
CD9-202ENST00000382515 IL2RBP14784 551 aa23.75■■□□□ 1.39
CD9-202ENST00000382515 IL13P35225 146 aa23.75■■□□□ 1.39
CD9-202ENST00000382515 LTN1O94822 1766 aa23.75■■□□□ 1.39
CD9-202ENST00000382515 ANP32CO43423 234 aa23.74■■□□□ 1.39
CD9-202ENST00000382515 EYA1Q99502 592 aa23.74■■□□□ 1.39
CD9-202ENST00000382515 NUDCQ9Y266 331 aa23.74■■□□□ 1.39
CD9-202ENST00000382515 MYBBP1AQ9BQG0 1328 aaKnown RBP23.74■■□□□ 1.39
CD9-202ENST00000382515 EXOC5O00471 708 aa23.73■■□□□ 1.39
CD9-202ENST00000382515 A0A0G2JS52 829 aa23.72■■□□□ 1.39
CD9-202ENST00000382515 MYT1Q01538 1121 aa23.72■■□□□ 1.39
CD9-202ENST00000382515 RAPGEF4Q8WZA2 1011 aa23.72■■□□□ 1.39
CD9-202ENST00000382515 MAP2P11137 1827 aaKnown RBP23.72■■□□□ 1.39
CD9-202ENST00000382515 GLI3P10071 1580 aa23.7■■□□□ 1.38
CD9-202ENST00000382515 PLEKHG2Q9H7P9 1386 aa23.7■■□□□ 1.38
CD9-202ENST00000382515 IGSF1Q8N6C5 1336 aa23.7■■□□□ 1.38
CD9-202ENST00000382515 PDE3BQ13370 1112 aa23.7■■□□□ 1.38
CD9-202ENST00000382515 DDB1Q16531 1140 aa23.7■■□□□ 1.38
CD9-202ENST00000382515 KRT27Q7Z3Y8 459 aa23.69■■□□□ 1.38
CD9-202ENST00000382515 PEAK1Q9H792 1746 aa23.68■■□□□ 1.38
CD9-202ENST00000382515 TATP17735 454 aaPredicted RBP23.68■■□□□ 1.38
CD9-202ENST00000382515 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.68■■□□□ 1.38
CD9-202ENST00000382515 RGS12O14924 1447 aa23.66■■□□□ 1.38
CD9-202ENST00000382515 NCAPD2Q15021 1401 aa23.66■■□□□ 1.38
CD9-202ENST00000382515 DISP2A7MBM2 1401 aa23.65■■□□□ 1.38
CD9-202ENST00000382515 ZCRB1Q8TBF4 217 aaKnown RBP23.64■■□□□ 1.37
CD9-202ENST00000382515 FAM208AQ9UK61 1670 aaKnown RBP23.64■■□□□ 1.37
CD9-202ENST00000382515 SULT6B1Q6IMI4 303 aa23.63■■□□□ 1.37
CD9-202ENST00000382515 USHBP1Q8N6Y0 703 aa23.63■■□□□ 1.37
CD9-202ENST00000382515 RGPD5Q99666 1765 aa23.63■■□□□ 1.37
CD9-202ENST00000382515 AMOTQ4VCS5 1084 aa23.62■■□□□ 1.37
CD9-202ENST00000382515 SPG7Q9UQ90 795 aa23.62■■□□□ 1.37
CD9-202ENST00000382515 KDRP35968 1356 aa23.62■■□□□ 1.37
CD9-202ENST00000382515 U2SURPO15042 1029 aaKnown RBP23.61■■□□□ 1.37
CD9-202ENST00000382515 FCHSD2O94868 740 aa23.61■■□□□ 1.37
CD9-202ENST00000382515 FAM196AQ6ZSG2 479 aa23.61■■□□□ 1.37
CD9-202ENST00000382515 PNNQ9H307 717 aaKnown RBP23.61■■□□□ 1.37
CD9-202ENST00000382515 PLEKHO1Q53GL0 409 aaPredicted RBP23.59■■□□□ 1.37
CD9-202ENST00000382515 U2AF1L5P0DN76 240 aaPredicted RBP23.58■■□□□ 1.37
CD9-202ENST00000382515 U2AF1Q01081 240 aaKnown RBP eCLIP23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms