RNA–Protein interactions for RNA: ENST00000374454.1

PDZD11-202, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PDZD11, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-202ENST00000374454 PPP2R1AP30153 589 aa13.44□□□□□ -0.26
PDZD11-202ENST00000374454 MTHFSP49914 203 aa13.44□□□□□ -0.26
PDZD11-202ENST00000374454 ZNF772Q68DY9 489 aaPredicted RBP13.44□□□□□ -0.26
PDZD11-202ENST00000374454 USP21Q9UK80 565 aa13.44□□□□□ -0.26
PDZD11-202ENST00000374454 BLMP54132 1417 aaPredicted RBP13.44□□□□□ -0.26
PDZD11-202ENST00000374454 SMG6Q86US8 1419 aaKnown RBP13.44□□□□□ -0.26
PDZD11-202ENST00000374454 FLT4P35916 1363 aa13.44□□□□□ -0.26
PDZD11-202ENST00000374454 CAMTA1Q9Y6Y1 1673 aa13.44□□□□□ -0.26
PDZD11-202ENST00000374454 BCL9LQ86UU0 1499 aa13.43□□□□□ -0.26
PDZD11-202ENST00000374454 COL18A1P39060 1754 aa13.43□□□□□ -0.26
PDZD11-202ENST00000374454 EVA1CP58658 441 aa13.43□□□□□ -0.26
PDZD11-202ENST00000374454 LMO7Q8WWI1 1683 aa13.43□□□□□ -0.26
PDZD11-202ENST00000374454 INSRP06213 1382 aa13.43□□□□□ -0.26
PDZD11-202ENST00000374454 PPM1GO15355 546 aaPredicted RBP13.42□□□□□ -0.26
PDZD11-202ENST00000374454 ANP32CO43423 234 aa13.42□□□□□ -0.26
PDZD11-202ENST00000374454 HSP90AB2PQ58FF8 381 aa13.42□□□□□ -0.26
PDZD11-202ENST00000374454 VPS72Q15906 364 aa13.41□□□□□ -0.26
PDZD11-202ENST00000374454 ANKRD24Q8TF21 1146 aa13.41□□□□□ -0.26
PDZD11-202ENST00000374454 RGS17Q9UGC6 210 aaPredicted RBP13.41□□□□□ -0.26
PDZD11-202ENST00000374454 TRPC5Q9UL62 973 aaPredicted RBP13.41□□□□□ -0.26
PDZD11-202ENST00000374454 NWD2Q9ULI1 1742 aa13.41□□□□□ -0.26
PDZD11-202ENST00000374454 COL5A2P05997 1499 aaPredicted RBP13.41□□□□□ -0.26
PDZD11-202ENST00000374454 ERBB3P21860 1342 aa13.4□□□□□ -0.26
PDZD11-202ENST00000374454 WDR17Q8IZU2 1322 aa13.4□□□□□ -0.26
PDZD11-202ENST00000374454 MYBBP1AQ9BQG0 1328 aaKnown RBP13.4□□□□□ -0.26
PDZD11-202ENST00000374454 PHF23Q9BUL5 403 aaPredicted RBP13.4□□□□□ -0.26
PDZD11-202ENST00000374454 MAP2P11137 1827 aaKnown RBP13.4□□□□□ -0.26
PDZD11-202ENST00000374454 LTN1O94822 1766 aa13.4□□□□□ -0.26
PDZD11-202ENST00000374454 LARP1Q6PKG0 1096 aaKnown RBP13.39□□□□□ -0.27
PDZD11-202ENST00000374454 QTRT2Q9H974 415 aaKnown RBP13.39□□□□□ -0.27
PDZD11-202ENST00000374454 STRN4Q9NRL3 753 aa13.39□□□□□ -0.27
PDZD11-202ENST00000374454 CDK12Q9NYV4 1490 aaPredicted RBP13.39□□□□□ -0.27
PDZD11-202ENST00000374454 PEAK1Q9H792 1746 aa13.39□□□□□ -0.27
PDZD11-202ENST00000374454 ATRNO75882 1429 aa13.39□□□□□ -0.27
PDZD11-202ENST00000374454 PLCH1Q4KWH8 1693 aa13.38□□□□□ -0.27
PDZD11-202ENST00000374454 CSB-PGBD3P0DP91 1061 aa13.38□□□□□ -0.27
PDZD11-202ENST00000374454 DIEXFQ68CQ4 756 aaKnown RBP13.38□□□□□ -0.27
PDZD11-202ENST00000374454 CFAP53Q96M91 514 aa13.38□□□□□ -0.27
PDZD11-202ENST00000374454 CARD10Q9BWT7 1032 aa13.38□□□□□ -0.27
PDZD11-202ENST00000374454 SPATA31A5Q5VU36 1347 aa13.38□□□□□ -0.27
PDZD11-202ENST00000374454 SPATA31A7Q8IWB4 1347 aa13.38□□□□□ -0.27
PDZD11-202ENST00000374454 IL13P35225 146 aa13.37□□□□□ -0.27
PDZD11-202ENST00000374454 EIF4A2Q14240 407 aaKnown RBP13.37□□□□□ -0.27
PDZD11-202ENST00000374454 TOM1L2Q6ZVM7 507 aa13.37□□□□□ -0.27
PDZD11-202ENST00000374454 LTV1Q96GA3 475 aaPredicted RBP13.37□□□□□ -0.27
PDZD11-202ENST00000374454 GJD4Q96KN9 370 aaPredicted RBP13.37□□□□□ -0.27
PDZD11-202ENST00000374454 CRB1P82279 1406 aa13.37□□□□□ -0.27
PDZD11-202ENST00000374454 SPATA31A1Q5TZJ5 1347 aa13.37□□□□□ -0.27
PDZD11-202ENST00000374454 NRAPQ86VF7 1730 aa13.36□□□□□ -0.27
PDZD11-202ENST00000374454 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.36□□□□□ -0.27
PDZD11-202ENST00000374454 DIAPH1O60610 1272 aaKnown RBP13.36□□□□□ -0.27
PDZD11-202ENST00000374454 THRAP3Q9Y2W1 955 aaKnown RBP13.36□□□□□ -0.27
PDZD11-202ENST00000374454 RBM6P78332 1123 aaKnown RBP13.35□□□□□ -0.27
PDZD11-202ENST00000374454 NBPF6Q5VWK0 638 aa13.35□□□□□ -0.27
PDZD11-202ENST00000374454 NBPF4Q96M43 638 aa13.35□□□□□ -0.27
PDZD11-202ENST00000374454 NLRP2Q9NX02 1062 aa13.35□□□□□ -0.27
PDZD11-202ENST00000374454 ONECUT3O60422 494 aaPredicted RBP13.34□□□□□ -0.27
PDZD11-202ENST00000374454 POTEAQ6S8J7 498 aa13.34□□□□□ -0.27
PDZD11-202ENST00000374454 BARGINQ6ZT62 677 aa13.34□□□□□ -0.27
PDZD11-202ENST00000374454 TCP11L2Q8N4U5 519 aa13.34□□□□□ -0.27
PDZD11-202ENST00000374454 EYA1Q99502 592 aa13.34□□□□□ -0.27
PDZD11-202ENST00000374454 CCDC9Q9Y3X0 531 aaKnown RBP13.34□□□□□ -0.27
PDZD11-202ENST00000374454 COL3A1P02461 1466 aaPredicted RBP13.34□□□□□ -0.27
PDZD11-202ENST00000374454 RGPD5Q99666 1765 aa13.33□□□□□ -0.28
PDZD11-202ENST00000374454 RXRBP28702 533 aa13.33□□□□□ -0.28
PDZD11-202ENST00000374454 NUDCQ9Y266 331 aa13.33□□□□□ -0.28
PDZD11-202ENST00000374454 IGSF1Q8N6C5 1336 aa13.33□□□□□ -0.28
PDZD11-202ENST00000374454 CDCA7Q9BWT1 371 aaPredicted RBP13.32□□□□□ -0.28
PDZD11-202ENST00000374454 NCAPD2Q15021 1401 aa13.31□□□□□ -0.28
PDZD11-202ENST00000374454 USP35Q9P2H5 1018 aa13.31□□□□□ -0.28
PDZD11-202ENST00000374454 FAM208AQ9UK61 1670 aaKnown RBP13.31□□□□□ -0.28
PDZD11-202ENST00000374454 IL2RBP14784 551 aa13.29□□□□□ -0.28
PDZD11-202ENST00000374454 FAM98CQ17RN3 349 aaKnown RBP13.29□□□□□ -0.28
PDZD11-202ENST00000374454 KDRP35968 1356 aa13.29□□□□□ -0.28
PDZD11-202ENST00000374454 GLI3P10071 1580 aa13.28□□□□□ -0.28
PDZD11-202ENST00000374454 SULT6B1Q6IMI4 303 aa13.28□□□□□ -0.28
PDZD11-202ENST00000374454 USHBP1Q8N6Y0 703 aa13.28□□□□□ -0.28
PDZD11-202ENST00000374454 PLEKHG2Q9H7P9 1386 aa13.28□□□□□ -0.28
PDZD11-202ENST00000374454 DISP2A7MBM2 1401 aa13.28□□□□□ -0.28
PDZD11-202ENST00000374454 CCER2I3L3R5 266 aa13.27□□□□□ -0.29
PDZD11-202ENST00000374454 U2SURPO15042 1029 aaKnown RBP13.27□□□□□ -0.29
PDZD11-202ENST00000374454 RAPGEF4Q8WZA2 1011 aa13.27□□□□□ -0.29
PDZD11-202ENST00000374454 FCHSD2O94868 740 aa13.26□□□□□ -0.29
PDZD11-202ENST00000374454 RGPD1P0DJD0 1748 aa13.26□□□□□ -0.29
PDZD11-202ENST00000374454 U2AF1L5P0DN76 240 aaPredicted RBP13.26□□□□□ -0.29
PDZD11-202ENST00000374454 TATP17735 454 aaPredicted RBP13.26□□□□□ -0.29
PDZD11-202ENST00000374454 U2AF1Q01081 240 aaKnown RBP eCLIP13.26□□□□□ -0.29
PDZD11-202ENST00000374454 CCDC184Q52MB2 194 aa13.26□□□□□ -0.29
PDZD11-202ENST00000374454 AEBP1Q8IUX7 1158 aa13.26□□□□□ -0.29
PDZD11-202ENST00000374454 SEPT12Q8IYM1 358 aa13.26□□□□□ -0.29
PDZD11-202ENST00000374454 MRS2Q9HD23 443 aa13.26□□□□□ -0.29
PDZD11-202ENST00000374454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.26□□□□□ -0.29
PDZD11-202ENST00000374454 EXOC5O00471 708 aa13.25□□□□□ -0.29
PDZD11-202ENST00000374454 MIER1Q8N108 512 aa13.25□□□□□ -0.29
PDZD11-202ENST00000374454 PNISRQ8TF01 805 aaKnown RBP13.25□□□□□ -0.29
PDZD11-202ENST00000374454 HMOX1P09601 288 aa13.24□□□□□ -0.29
PDZD11-202ENST00000374454 WDR43Q15061 677 aaKnown RBP eCLIP13.24□□□□□ -0.29
PDZD11-202ENST00000374454 RSPH6AQ9H0K4 717 aa13.24□□□□□ -0.29
PDZD11-202ENST00000374454 PNNQ9H307 717 aaKnown RBP13.24□□□□□ -0.29
PDZD11-202ENST00000374454 RGPD2P0DJD1 1756 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms