RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 MAGI1Q96QZ7 1491 aaPredicted RBP13.43□□□□□ -0.26
SYNPO2L-201ENST00000372873 HSP90B2PQ58FF3 399 aa13.42□□□□□ -0.26
SYNPO2L-201ENST00000372873 TMEM57Q8N5G2 664 aa13.42□□□□□ -0.26
SYNPO2L-201ENST00000372873 UBXN4Q92575 508 aa13.42□□□□□ -0.26
SYNPO2L-201ENST00000372873 STK26Q9P289 416 aa13.42□□□□□ -0.26
SYNPO2L-201ENST00000372873 PAXBP1Q9Y5B6 917 aa13.42□□□□□ -0.26
SYNPO2L-201ENST00000372873 SAMD9Q5K651 1589 aa13.42□□□□□ -0.26
SYNPO2L-201ENST00000372873 FBXW7Q969H0 707 aa13.42□□□□□ -0.26
SYNPO2L-201ENST00000372873 LMBRD1Q9NUN5 540 aa13.42□□□□□ -0.26
SYNPO2L-201ENST00000372873 TRAK1Q9UPV9 953 aa13.42□□□□□ -0.26
SYNPO2L-201ENST00000372873 TCOF1Q13428 1488 aaKnown RBP13.42□□□□□ -0.26
SYNPO2L-201ENST00000372873 PARD3Q8TEW0 1356 aa13.42□□□□□ -0.26
SYNPO2L-201ENST00000372873 WDR62O43379 1518 aa13.41□□□□□ -0.26
SYNPO2L-201ENST00000372873 AEBP2Q6ZN18 517 aaPredicted RBP13.41□□□□□ -0.26
SYNPO2L-201ENST00000372873 KIF18AQ8NI77 898 aa13.41□□□□□ -0.26
SYNPO2L-201ENST00000372873 ADAMTS12P58397 1594 aa13.41□□□□□ -0.26
SYNPO2L-201ENST00000372873 TRMT1Q9NXH9 659 aaKnown RBP13.41□□□□□ -0.26
SYNPO2L-201ENST00000372873 TMEM63CQ9P1W3 806 aa13.41□□□□□ -0.26
SYNPO2L-201ENST00000372873 ESF1Q9H501 851 aaKnown RBP13.41□□□□□ -0.26
SYNPO2L-201ENST00000372873 RSPH14Q9UHP6 348 aa13.4□□□□□ -0.26
SYNPO2L-201ENST00000372873 OS9Q13438 667 aaPredicted RBP13.4□□□□□ -0.26
SYNPO2L-201ENST00000372873 WDR63Q8IWG1 891 aa13.4□□□□□ -0.26
SYNPO2L-201ENST00000372873 ZGPATQ8N5A5 531 aaKnown RBP13.4□□□□□ -0.26
SYNPO2L-201ENST00000372873 CEP135Q66GS9 1140 aa13.4□□□□□ -0.26
SYNPO2L-201ENST00000372873 KDM6BO15054 1643 aa13.39□□□□□ -0.27
SYNPO2L-201ENST00000372873 SLC4A10Q6U841 1118 aa13.39□□□□□ -0.27
SYNPO2L-201ENST00000372873 ZNF397Q8NF99 534 aaPredicted RBP13.39□□□□□ -0.27
SYNPO2L-201ENST00000372873 CCDC186Q7Z3E2 898 aa13.39□□□□□ -0.27
SYNPO2L-201ENST00000372873 RNF20Q5VTR2 975 aa13.39□□□□□ -0.27
SYNPO2L-201ENST00000372873 ERC2O15083 957 aa13.38□□□□□ -0.27
SYNPO2L-201ENST00000372873 TMEM51Q9NW97 253 aa13.38□□□□□ -0.27
SYNPO2L-201ENST00000372873 RAPGEF6Q8TEU7 1601 aa13.38□□□□□ -0.27
SYNPO2L-201ENST00000372873 CALRP27797 417 aaKnown RBP13.38□□□□□ -0.27
SYNPO2L-201ENST00000372873 GIMAP6Q6P9H5 292 aa13.38□□□□□ -0.27
SYNPO2L-201ENST00000372873 TXLNBQ8N3L3 684 aa13.38□□□□□ -0.27
SYNPO2L-201ENST00000372873 ZBTB9Q96C00 473 aa13.38□□□□□ -0.27
SYNPO2L-201ENST00000372873 SMTNL1A8MU46 457 aa13.38□□□□□ -0.27
SYNPO2L-201ENST00000372873 H0YHG0 523 aa13.38□□□□□ -0.27
SYNPO2L-201ENST00000372873 GTF3C6Q969F1 213 aa13.38□□□□□ -0.27
SYNPO2L-201ENST00000372873 TNMDQ9H2S6 317 aa13.38□□□□□ -0.27
SYNPO2L-201ENST00000372873 IRX5P78411 483 aaPredicted RBP13.37□□□□□ -0.27
SYNPO2L-201ENST00000372873 CAMK4Q16566 473 aa13.37□□□□□ -0.27
SYNPO2L-201ENST00000372873 DISP1Q96F81 1524 aa13.37□□□□□ -0.27
SYNPO2L-201ENST00000372873 TRIM27P14373 513 aa13.37□□□□□ -0.27
SYNPO2L-201ENST00000372873 LMAN1P49257 510 aa13.37□□□□□ -0.27
SYNPO2L-201ENST00000372873 MTHFSP49914 203 aa13.37□□□□□ -0.27
SYNPO2L-201ENST00000372873 CCDC191Q8NCU4 936 aa13.37□□□□□ -0.27
SYNPO2L-201ENST00000372873 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.37□□□□□ -0.27
SYNPO2L-201ENST00000372873 KDM5BQ9UGL1 1544 aa13.37□□□□□ -0.27
SYNPO2L-201ENST00000372873 CTR9Q6PD62 1173 aa13.37□□□□□ -0.27
SYNPO2L-201ENST00000372873 LMOD3Q0VAK6 560 aa13.36□□□□□ -0.27
SYNPO2L-201ENST00000372873 HDAC1Q13547 482 aaPredicted RBP13.36□□□□□ -0.27
SYNPO2L-201ENST00000372873 SSH1Q8WYL5 1049 aa13.36□□□□□ -0.27
SYNPO2L-201ENST00000372873 UPF3BQ9BZI7 483 aaKnown RBP13.36□□□□□ -0.27
SYNPO2L-201ENST00000372873 KIAA0556O60303 1618 aa13.36□□□□□ -0.27
SYNPO2L-201ENST00000372873 PTGS1P23219 599 aa13.36□□□□□ -0.27
SYNPO2L-201ENST00000372873 KDM4AO75164 1064 aa13.36□□□□□ -0.27
SYNPO2L-201ENST00000372873 CFAP70Q5T0N1 1121 aa13.36□□□□□ -0.27
SYNPO2L-201ENST00000372873 CLIP2Q9UDT6 1046 aa13.36□□□□□ -0.27
SYNPO2L-201ENST00000372873 ATP10BO94823 1461 aa13.35□□□□□ -0.27
SYNPO2L-201ENST00000372873 HSP90B1P14625 803 aaKnown RBP13.35□□□□□ -0.27
SYNPO2L-201ENST00000372873 NUP62CLQ9H1M0 184 aa13.35□□□□□ -0.27
SYNPO2L-201ENST00000372873 PER1O15534 1290 aaPredicted RBP13.35□□□□□ -0.27
SYNPO2L-201ENST00000372873 MAP3K11Q16584 847 aa13.35□□□□□ -0.27
SYNPO2L-201ENST00000372873 FAM177A1Q8N128 213 aaPredicted RBP13.35□□□□□ -0.27
SYNPO2L-201ENST00000372873 RDXP35241 583 aaKnown RBP13.35□□□□□ -0.27
SYNPO2L-201ENST00000372873 MLECQ14165 292 aa13.35□□□□□ -0.27
SYNPO2L-201ENST00000372873 HDAC5Q9UQL6 1122 aa13.35□□□□□ -0.27
SYNPO2L-201ENST00000372873 NUCB1Q02818 461 aa13.34□□□□□ -0.27
SYNPO2L-201ENST00000372873 C14orf37Q86TY3 774 aa13.34□□□□□ -0.27
SYNPO2L-201ENST00000372873 H3BQV1 296 aa13.34□□□□□ -0.27
SYNPO2L-201ENST00000372873 IFFO2Q5TF58 517 aa13.34□□□□□ -0.27
SYNPO2L-201ENST00000372873 USP48Q86UV5 1035 aa13.34□□□□□ -0.27
SYNPO2L-201ENST00000372873 IBTKQ9P2D0 1353 aaPredicted RBP13.34□□□□□ -0.27
SYNPO2L-201ENST00000372873 TARBP1Q13395 1621 aaKnown RBP13.34□□□□□ -0.27
SYNPO2L-201ENST00000372873 KRBA2Q6ZNG9 492 aa13.34□□□□□ -0.27
SYNPO2L-201ENST00000372873 API5Q9BZZ5 524 aaKnown RBP13.34□□□□□ -0.27
SYNPO2L-201ENST00000372873 LRRFIP2Q9Y608 721 aaKnown RBP13.34□□□□□ -0.27
SYNPO2L-201ENST00000372873 PDLIM2Q96JY6 352 aa13.33□□□□□ -0.27
SYNPO2L-201ENST00000372873 PKP1Q13835 747 aa13.33□□□□□ -0.28
SYNPO2L-201ENST00000372873 ERBINQ96RT1 1412 aa13.33□□□□□ -0.28
SYNPO2L-201ENST00000372873 CLGNO14967 610 aa13.33□□□□□ -0.28
SYNPO2L-201ENST00000372873 FKBP5Q13451 457 aaPredicted RBP13.33□□□□□ -0.28
SYNPO2L-201ENST00000372873 CKAP2LQ8IYA6 745 aa13.33□□□□□ -0.28
SYNPO2L-201ENST00000372873 GPT2Q8TD30 523 aa13.33□□□□□ -0.28
SYNPO2L-201ENST00000372873 CHAMP1Q96JM3 812 aa13.33□□□□□ -0.28
SYNPO2L-201ENST00000372873 FMNL2Q96PY5 1086 aa13.33□□□□□ -0.28
SYNPO2L-201ENST00000372873 CCDC141Q6ZP82 1450 aa13.33□□□□□ -0.28
SYNPO2L-201ENST00000372873 KIF2AO00139 706 aaPredicted RBP13.32□□□□□ -0.28
SYNPO2L-201ENST00000372873 CT47B1P0C2W7 299 aaPredicted RBP13.32□□□□□ -0.28
SYNPO2L-201ENST00000372873 MX1P20591 662 aa13.32□□□□□ -0.28
SYNPO2L-201ENST00000372873 SF3A1Q15459 793 aaKnown RBP13.32□□□□□ -0.28
SYNPO2L-201ENST00000372873 SPATA31E1Q6ZUB1 1445 aa13.32□□□□□ -0.28
SYNPO2L-201ENST00000372873 PBRM1Q86U86 1689 aa13.32□□□□□ -0.28
SYNPO2L-201ENST00000372873 SMC2O95347 1197 aa13.32□□□□□ -0.28
SYNPO2L-201ENST00000372873 HSP90AB3PQ58FF7 597 aa13.32□□□□□ -0.28
SYNPO2L-201ENST00000372873 TMX3Q96JJ7 454 aa13.32□□□□□ -0.28
SYNPO2L-201ENST00000372873 USP8P40818 1118 aa13.32□□□□□ -0.28
SYNPO2L-201ENST00000372873 ACBD3Q9H3P7 528 aa13.32□□□□□ -0.28
SYNPO2L-201ENST00000372873 TTLL5Q6EMB2 1281 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms