RNA–Protein interactions for RNA: ENST00000364313.1

RNVU1-3-201, Transcript of RNA, variant U1 small nuclear 3, humanhuman

BASIC

Gene RNVU1-3, Length 161 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-3-201ENST00000364313 CLDN10P78369 228 aa6.19□□□□□ -1.42
RNVU1-3-201ENST00000364313 OCLNQ16625 522 aa6.19□□□□□ -1.42
RNVU1-3-201ENST00000364313 PUS10Q3MIT2 529 aaKnown RBP6.19□□□□□ -1.42
RNVU1-3-201ENST00000364313 NBPF14Q5TI25 921 aa6.19□□□□□ -1.42
RNVU1-3-201ENST00000364313 CCDC125Q86Z20 511 aa6.19□□□□□ -1.42
RNVU1-3-201ENST00000364313 DNAAF2Q9NVR5 837 aaKnown RBP6.19□□□□□ -1.42
RNVU1-3-201ENST00000364313 MAP10Q9P2G4 905 aa6.19□□□□□ -1.42
RNVU1-3-201ENST00000364313 POTEB2H3BUK9 544 aa6.18□□□□□ -1.42
RNVU1-3-201ENST00000364313 ICMTO60725 284 aa6.18□□□□□ -1.42
RNVU1-3-201ENST00000364313 KCNH2Q12809 1159 aa6.18□□□□□ -1.42
RNVU1-3-201ENST00000364313 DMRTA1Q5VZB9 504 aa6.18□□□□□ -1.42
RNVU1-3-201ENST00000364313 POTEHQ6S545 545 aa6.18□□□□□ -1.42
RNVU1-3-201ENST00000364313 FBXO33Q7Z6M2 555 aa6.18□□□□□ -1.42
RNVU1-3-201ENST00000364313 SCUBE3Q8IX30 993 aa6.18□□□□□ -1.42
RNVU1-3-201ENST00000364313 CXXC1Q9P0U4 656 aaPredicted RBP6.18□□□□□ -1.42
RNVU1-3-201ENST00000364313 USP35Q9P2H5 1018 aa6.18□□□□□ -1.42
RNVU1-3-201ENST00000364313 NOD1Q9Y239 953 aa6.18□□□□□ -1.42
RNVU1-3-201ENST00000364313 DXOO77932 396 aaKnown RBP6.17□□□□□ -1.42
RNVU1-3-201ENST00000364313 CCNYL3P0C7X3 344 aa6.17□□□□□ -1.42
RNVU1-3-201ENST00000364313 MMP16P51512 607 aa6.17□□□□□ -1.42
RNVU1-3-201ENST00000364313 SEC13P55735 322 aa6.17□□□□□ -1.42
RNVU1-3-201ENST00000364313 ECM1Q16610 540 aa6.17□□□□□ -1.42
RNVU1-3-201ENST00000364313 GIPC2Q8TF65 315 aa6.17□□□□□ -1.42
RNVU1-3-201ENST00000364313 PUS7Q96PZ0 661 aaKnown RBP6.17□□□□□ -1.42
RNVU1-3-201ENST00000364313 M0R2N6 131 aa6.16□□□□□ -1.42
RNVU1-3-201ENST00000364313 NR1I2O75469 434 aa6.16□□□□□ -1.42
RNVU1-3-201ENST00000364313 LRCH3Q96II8 777 aa6.16□□□□□ -1.42
RNVU1-3-201ENST00000364313 ASB16Q96NS5 453 aa6.16□□□□□ -1.42
RNVU1-3-201ENST00000364313 SF3B2Q13435 895 aaKnown RBP6.15□□□□□ -1.42
RNVU1-3-201ENST00000364313 SH3BP5LQ7L8J4 393 aa6.15□□□□□ -1.42
RNVU1-3-201ENST00000364313 ADAM32Q8TC27 787 aa6.15□□□□□ -1.42
RNVU1-3-201ENST00000364313 COL26A1Q96A83 441 aa6.15□□□□□ -1.42
RNVU1-3-201ENST00000364313 PCDHB9Q9Y5E1 797 aa6.15□□□□□ -1.42
RNVU1-3-201ENST00000364313 C21orf2O43822 256 aa6.14□□□□□ -1.43
RNVU1-3-201ENST00000364313 SH3RF1Q7Z6J0 888 aa6.14□□□□□ -1.43
RNVU1-3-201ENST00000364313 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.14□□□□□ -1.43
RNVU1-3-201ENST00000364313 BIN2Q9UBW5 565 aaPredicted RBP6.14□□□□□ -1.43
RNVU1-3-201ENST00000364313 DCTN4Q9UJW0 460 aa6.14□□□□□ -1.43
RNVU1-3-201ENST00000364313 HSP90B1P14625 803 aaKnown RBP6.13□□□□□ -1.43
RNVU1-3-201ENST00000364313 NPR3P17342 541 aa6.13□□□□□ -1.43
RNVU1-3-201ENST00000364313 WEE1P30291 646 aa6.13□□□□□ -1.43
RNVU1-3-201ENST00000364313 CTHP32929 405 aa6.13□□□□□ -1.43
RNVU1-3-201ENST00000364313 FKBP4Q02790 459 aaKnown RBP eCLIP6.13□□□□□ -1.43
RNVU1-3-201ENST00000364313 TSGA10IPQ3SY00 556 aa6.13□□□□□ -1.43
RNVU1-3-201ENST00000364313 RNF20Q5VTR2 975 aa6.13□□□□□ -1.43
RNVU1-3-201ENST00000364313 CCDC102BQ68D86 513 aa6.13□□□□□ -1.43
RNVU1-3-201ENST00000364313 ZSCAN29Q8IWY8 852 aaPredicted RBP6.13□□□□□ -1.43
RNVU1-3-201ENST00000364313 NUDT12Q9BQG2 462 aa6.13□□□□□ -1.43
RNVU1-3-201ENST00000364313 ARHGAP9Q9BRR9 750 aa6.13□□□□□ -1.43
RNVU1-3-201ENST00000364313 KIAA1024Q9UPX6 916 aa6.13□□□□□ -1.43
RNVU1-3-201ENST00000364313 PCDHGA11Q9Y5H2 935 aa6.13□□□□□ -1.43
RNVU1-3-201ENST00000364313 PTCD1O75127 700 aaKnown RBP6.12□□□□□ -1.43
RNVU1-3-201ENST00000364313 RNF40O75150 1001 aa6.12□□□□□ -1.43
RNVU1-3-201ENST00000364313 GTF2IP78347 998 aa6.12□□□□□ -1.43
RNVU1-3-201ENST00000364313 ARHGAP4P98171 946 aa6.12□□□□□ -1.43
RNVU1-3-201ENST00000364313 ZNF687Q8N1G0 1237 aa6.12□□□□□ -1.43
RNVU1-3-201ENST00000364313 MRPL50Q8N5N7 158 aaKnown RBP6.12□□□□□ -1.43
RNVU1-3-201ENST00000364313 FAM160A2Q8N612 972 aaPredicted RBP6.12□□□□□ -1.43
RNVU1-3-201ENST00000364313 SP7Q8TDD2 431 aaPredicted RBP6.12□□□□□ -1.43
RNVU1-3-201ENST00000364313 ZNF594Q96JF6 807 aaPredicted RBP6.12□□□□□ -1.43
RNVU1-3-201ENST00000364313 DRC1Q96MC2 740 aa6.12□□□□□ -1.43
RNVU1-3-201ENST00000364313 CCDC85AQ96PX6 553 aaPredicted RBP6.12□□□□□ -1.43
RNVU1-3-201ENST00000364313 DOLKQ9UPQ8 538 aa6.12□□□□□ -1.43
RNVU1-3-201ENST00000364313 RECKO95980 971 aa6.11□□□□□ -1.43
RNVU1-3-201ENST00000364313 CANXP27824 592 aaKnown RBP6.11□□□□□ -1.43
RNVU1-3-201ENST00000364313 ZC3H6P61129 1189 aaKnown RBP6.11□□□□□ -1.43
RNVU1-3-201ENST00000364313 SEPT12Q8IYM1 358 aa6.11□□□□□ -1.43
RNVU1-3-201ENST00000364313 RGL4Q8IZJ4 473 aa6.11□□□□□ -1.43
RNVU1-3-201ENST00000364313 SREK1Q8WXA9 508 aaKnown RBP6.11□□□□□ -1.43
RNVU1-3-201ENST00000364313 PCDHB3Q9Y5E6 796 aa6.11□□□□□ -1.43
RNVU1-3-201ENST00000364313 SOWAHBA6NEL2 793 aa6.1□□□□□ -1.43
RNVU1-3-201ENST00000364313 ESPNB1AK53 854 aa6.1□□□□□ -1.43
RNVU1-3-201ENST00000364313 H3BRB1 525 aa6.1□□□□□ -1.43
RNVU1-3-201ENST00000364313 PRMT3O60678 531 aa6.1□□□□□ -1.43
RNVU1-3-201ENST00000364313 SCNN1AP37088 669 aa6.1□□□□□ -1.43
RNVU1-3-201ENST00000364313 APLP1P51693 650 aa6.1□□□□□ -1.43
RNVU1-3-201ENST00000364313 USP4Q13107 963 aa6.1□□□□□ -1.43
RNVU1-3-201ENST00000364313 ZBTB33Q86T24 672 aa6.1□□□□□ -1.43
RNVU1-3-201ENST00000364313 GLYCTKQ8IVS8 523 aa6.1□□□□□ -1.43
RNVU1-3-201ENST00000364313 BCL11AQ9H165 835 aa6.1□□□□□ -1.43
RNVU1-3-201ENST00000364313 TUT1Q9H6E5 874 aaKnown RBP6.1□□□□□ -1.43
RNVU1-3-201ENST00000364313 RBM19Q9Y4C8 960 aaKnown RBP6.1□□□□□ -1.43
RNVU1-3-201ENST00000364313 ERBB3P21860 1342 aa6.09□□□□□ -1.43
RNVU1-3-201ENST00000364313 HRO43593 1189 aa6.09□□□□□ -1.43
RNVU1-3-201ENST00000364313 PPP4CP60510 307 aa6.09□□□□□ -1.43
RNVU1-3-201ENST00000364313 MRPL58Q14197 206 aaKnown RBP6.09□□□□□ -1.43
RNVU1-3-201ENST00000364313 VARS2Q5ST30 1063 aaKnown RBP6.09□□□□□ -1.43
RNVU1-3-201ENST00000364313 DZIP3Q86Y13 1208 aaKnown RBP6.09□□□□□ -1.43
RNVU1-3-201ENST00000364313 TPCN2Q8NHX9 752 aa6.09□□□□□ -1.43
RNVU1-3-201ENST00000364313 GTF3C2Q8WUA4 911 aaPredicted RBP6.09□□□□□ -1.43
RNVU1-3-201ENST00000364313 RBCK1Q9BYM8 510 aa6.09□□□□□ -1.43
RNVU1-3-201ENST00000364313 PCDH10Q9P2E7 1040 aa6.09□□□□□ -1.43
RNVU1-3-201ENST00000364313 TSR3Q9UJK0 312 aaKnown RBP6.09□□□□□ -1.43
RNVU1-3-201ENST00000364313 AXIN2Q9Y2T1 843 aa6.09□□□□□ -1.43
RNVU1-3-201ENST00000364313 GIGYF1O75420 1035 aaPredicted RBP6.08□□□□□ -1.44
RNVU1-3-201ENST00000364313 MAPK1P28482 360 aa6.08□□□□□ -1.44
RNVU1-3-201ENST00000364313 FGD1P98174 961 aa6.08□□□□□ -1.44
RNVU1-3-201ENST00000364313 PRIMPOLQ96LW4 560 aa6.08□□□□□ -1.44
RNVU1-3-201ENST00000364313 CITED4Q96RK1 184 aa6.08□□□□□ -1.44
RNVU1-3-201ENST00000364313 SPSB2Q99619 263 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms