RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 NRXN1Q9ULB1 1477 aa18.65■□□□□ 0.58
UBAP1-202ENST00000359544 TOM1O60784 492 aa18.65■□□□□ 0.58
UBAP1-202ENST00000359544 POLR3AO14802 1390 aaPredicted RBP18.64■□□□□ 0.58
UBAP1-202ENST00000359544 XRN1Q8IZH2 1706 aaKnown RBP18.64■□□□□ 0.57
UBAP1-202ENST00000359544 MSNP26038 577 aaKnown RBP18.64■□□□□ 0.57
UBAP1-202ENST00000359544 RAB3GAP1Q15042 981 aa18.64■□□□□ 0.57
UBAP1-202ENST00000359544 MVPQ14764 893 aaKnown RBP18.63■□□□□ 0.57
UBAP1-202ENST00000359544 RBM25P49756 843 aaKnown RBP18.63■□□□□ 0.57
UBAP1-202ENST00000359544 TRAK1Q9UPV9 953 aa18.63■□□□□ 0.57
UBAP1-202ENST00000359544 IBTKQ9P2D0 1353 aaPredicted RBP18.63■□□□□ 0.57
UBAP1-202ENST00000359544 NASPP49321 788 aaPredicted RBP18.62■□□□□ 0.57
UBAP1-202ENST00000359544 WDR63Q8IWG1 891 aa18.62■□□□□ 0.57
UBAP1-202ENST00000359544 IQSEC2Q5JU85 1478 aa18.62■□□□□ 0.57
UBAP1-202ENST00000359544 SLC24A1O60721 1099 aa18.62■□□□□ 0.57
UBAP1-202ENST00000359544 MSH6P52701 1360 aa18.62■□□□□ 0.57
UBAP1-202ENST00000359544 HSP90AB1P08238 724 aaKnown RBP18.61■□□□□ 0.57
UBAP1-202ENST00000359544 STAC3Q96MF2 364 aa18.61■□□□□ 0.57
UBAP1-202ENST00000359544 YTHDC2Q9H6S0 1430 aaKnown RBP18.61■□□□□ 0.57
UBAP1-202ENST00000359544 NUTM2FA1L443 756 aa18.6■□□□□ 0.57
UBAP1-202ENST00000359544 GOLGA6L22H0YM25 854 aa18.6■□□□□ 0.57
UBAP1-202ENST00000359544 RUNDC1Q96C34 613 aa18.6■□□□□ 0.57
UBAP1-202ENST00000359544 HDAC1Q13547 482 aaPredicted RBP18.59■□□□□ 0.57
UBAP1-202ENST00000359544 HS1BP3Q53T59 392 aa18.59■□□□□ 0.57
UBAP1-202ENST00000359544 C19orf44Q9H6X5 657 aa18.59■□□□□ 0.57
UBAP1-202ENST00000359544 TNNQ9UQP3 1299 aa18.59■□□□□ 0.57
UBAP1-202ENST00000359544 HSPA1LP34931 641 aa18.58■□□□□ 0.56
UBAP1-202ENST00000359544 FTSJ3Q8IY81 847 aaKnown RBP18.58■□□□□ 0.56
UBAP1-202ENST00000359544 PRAM1Q96QH2 718 aa18.58■□□□□ 0.56
UBAP1-202ENST00000359544 ATF3P18847 181 aa18.57■□□□□ 0.56
UBAP1-202ENST00000359544 ZKSCAN2Q63HK3 967 aa18.57■□□□□ 0.56
UBAP1-202ENST00000359544 PHF23Q9BUL5 403 aaPredicted RBP18.57■□□□□ 0.56
UBAP1-202ENST00000359544 SLAIN2Q9P270 581 aa18.57■□□□□ 0.56
UBAP1-202ENST00000359544 MTERF4Q7Z6M4 381 aaKnown RBP18.57■□□□□ 0.56
UBAP1-202ENST00000359544 PODXL2Q9NZ53 605 aa18.57■□□□□ 0.56
UBAP1-202ENST00000359544 DZIP1LQ8IYY4 767 aaKnown RBP18.56■□□□□ 0.56
UBAP1-202ENST00000359544 SHPRHQ149N8 1683 aa18.56■□□□□ 0.56
UBAP1-202ENST00000359544 RIPK4P57078 832 aa18.56■□□□□ 0.56
UBAP1-202ENST00000359544 CCDC27Q2M243 656 aa18.56■□□□□ 0.56
UBAP1-202ENST00000359544 PRDM4Q9UKN5 801 aa18.56■□□□□ 0.56
UBAP1-202ENST00000359544 ADGRB1O14514 1584 aa18.55■□□□□ 0.56
UBAP1-202ENST00000359544 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.55■□□□□ 0.56
UBAP1-202ENST00000359544 BCL2L13Q9BXK5 485 aa18.55■□□□□ 0.56
UBAP1-202ENST00000359544 PTCH1Q13635 1447 aa18.54■□□□□ 0.56
UBAP1-202ENST00000359544 KLHL40Q2TBA0 621 aa18.54■□□□□ 0.56
UBAP1-202ENST00000359544 ABCC11Q96J66 1382 aa18.54■□□□□ 0.56
UBAP1-202ENST00000359544 NALCNQ8IZF0 1738 aa18.54■□□□□ 0.56
UBAP1-202ENST00000359544 CT47B1P0C2W7 299 aaPredicted RBP18.54■□□□□ 0.56
UBAP1-202ENST00000359544 NCBP3Q53F19 620 aaKnown RBP18.54■□□□□ 0.56
UBAP1-202ENST00000359544 NEUROD2Q15784 382 aa18.53■□□□□ 0.56
UBAP1-202ENST00000359544 CLEC17AQ6ZS10 378 aa18.53■□□□□ 0.56
UBAP1-202ENST00000359544 TCP11L2Q8N4U5 519 aa18.53■□□□□ 0.56
UBAP1-202ENST00000359544 DDX17Q92841 729 aaKnown RBP18.53■□□□□ 0.56
UBAP1-202ENST00000359544 KIAA1210Q9ULL0 1709 aa18.53■□□□□ 0.56
UBAP1-202ENST00000359544 DDX19BQ9UMR2 479 aa18.52■□□□□ 0.56
UBAP1-202ENST00000359544 ADGRL3Q9HAR2 1447 aa18.52■□□□□ 0.56
UBAP1-202ENST00000359544 RBM10P98175 930 aaKnown RBP18.52■□□□□ 0.55
UBAP1-202ENST00000359544 CADPS2Q86UW7 1296 aa18.52■□□□□ 0.55
UBAP1-202ENST00000359544 MINK1Q8N4C8 1332 aaPredicted RBP18.51■□□□□ 0.55
UBAP1-202ENST00000359544 ZNF500O60304 480 aaPredicted RBP18.51■□□□□ 0.55
UBAP1-202ENST00000359544 RRP7AQ9Y3A4 280 aaKnown RBP18.51■□□□□ 0.55
UBAP1-202ENST00000359544 K7ELQ4 463 aaPredicted RBP18.5■□□□□ 0.55
UBAP1-202ENST00000359544 SMAP1Q8IYB5 467 aaPredicted RBP18.5■□□□□ 0.55
UBAP1-202ENST00000359544 FAM13BQ9NYF5 915 aa18.5■□□□□ 0.55
UBAP1-202ENST00000359544 R3HCC1Q9Y3T6 440 aaKnown RBP18.5■□□□□ 0.55
UBAP1-202ENST00000359544 DDX49Q9Y6V7 483 aaKnown RBP18.5■□□□□ 0.55
UBAP1-202ENST00000359544 TECPR2O15040 1411 aa18.5■□□□□ 0.55
UBAP1-202ENST00000359544 ZNF445P59923 1031 aa18.5■□□□□ 0.55
UBAP1-202ENST00000359544 NOL7Q9UMY1 257 aaKnown RBP18.5■□□□□ 0.55
UBAP1-202ENST00000359544 CSPP1Q1MSJ5 1256 aa18.49■□□□□ 0.55
UBAP1-202ENST00000359544 ORAI2Q96SN7 254 aa18.49■□□□□ 0.55
UBAP1-202ENST00000359544 CARD14Q9BXL6 1004 aa18.49■□□□□ 0.55
UBAP1-202ENST00000359544 ROBO1Q9Y6N7 1651 aa18.48■□□□□ 0.55
UBAP1-202ENST00000359544 DYNC1I1O14576 645 aa18.47■□□□□ 0.55
UBAP1-202ENST00000359544 BRINP3Q76B58 766 aa18.47■□□□□ 0.55
UBAP1-202ENST00000359544 MST1RQ04912 1400 aa18.47■□□□□ 0.55
UBAP1-202ENST00000359544 UQCRHLA0A096LP55 91 aa18.47■□□□□ 0.55
UBAP1-202ENST00000359544 UQCRHP07919 91 aa18.47■□□□□ 0.55
UBAP1-202ENST00000359544 KIF16BQ96L93 1317 aa18.46■□□□□ 0.55
UBAP1-202ENST00000359544 MCM5P33992 734 aa18.46■□□□□ 0.55
UBAP1-202ENST00000359544 NUCB1Q02818 461 aa18.46■□□□□ 0.55
UBAP1-202ENST00000359544 BAG4O95429 457 aaKnown RBP18.45■□□□□ 0.54
UBAP1-202ENST00000359544 SSFA2P28290 1259 aa18.45■□□□□ 0.54
UBAP1-202ENST00000359544 ITPRIPQ8IWB1 547 aa18.45■□□□□ 0.54
UBAP1-202ENST00000359544 BMP2KLQ5H9B9 411 aa18.45■□□□□ 0.54
UBAP1-202ENST00000359544 MORC1Q86VD1 984 aa18.45■□□□□ 0.54
UBAP1-202ENST00000359544 PDLIM2Q96JY6 352 aa18.45■□□□□ 0.54
UBAP1-202ENST00000359544 SMC4Q9NTJ3 1288 aa18.45■□□□□ 0.54
UBAP1-202ENST00000359544 KNDC1Q76NI1 1749 aa18.44■□□□□ 0.54
UBAP1-202ENST00000359544 KIF2CQ99661 725 aa18.44■□□□□ 0.54
UBAP1-202ENST00000359544 ESCO1Q5FWF5 840 aa18.44■□□□□ 0.54
UBAP1-202ENST00000359544 CFAP53Q96M91 514 aa18.44■□□□□ 0.54
UBAP1-202ENST00000359544 FAM135BQ49AJ0 1406 aa18.43■□□□□ 0.54
UBAP1-202ENST00000359544 TRIM27P14373 513 aa18.43■□□□□ 0.54
UBAP1-202ENST00000359544 XPCQ01831 940 aaPredicted RBP18.43■□□□□ 0.54
UBAP1-202ENST00000359544 ATF7IPQ6VMQ6 1270 aa18.42■□□□□ 0.54
UBAP1-202ENST00000359544 FOXD4L1Q9NU39 408 aa18.42■□□□□ 0.54
UBAP1-202ENST00000359544 C1orf167Q5SNV9 1468 aa18.42■□□□□ 0.54
UBAP1-202ENST00000359544 SIRT1Q96EB6 747 aa18.42■□□□□ 0.54
UBAP1-202ENST00000359544 ZKSCAN5Q9Y2L8 839 aa18.41■□□□□ 0.54
UBAP1-202ENST00000359544 DCCP43146 1447 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms