RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 UNC5CLQ8IV45 518 aa21.04■□□□□ 0.96
TRIM13-201ENST00000356017 AXIN2Q9Y2T1 843 aa21.04■□□□□ 0.96
TRIM13-201ENST00000356017 FLT4P35916 1363 aa21.03■□□□□ 0.96
TRIM13-201ENST00000356017 BLMP54132 1417 aaPredicted RBP21.03■□□□□ 0.96
TRIM13-201ENST00000356017 HOXC9P31274 260 aa21.03■□□□□ 0.96
TRIM13-201ENST00000356017 EVA1CP58658 441 aa21.03■□□□□ 0.96
TRIM13-201ENST00000356017 BCL9LQ86UU0 1499 aa21.01■□□□□ 0.95
TRIM13-201ENST00000356017 LMO7Q8WWI1 1683 aa21.01■□□□□ 0.95
TRIM13-201ENST00000356017 CAMTA1Q9Y6Y1 1673 aa21.01■□□□□ 0.95
TRIM13-201ENST00000356017 LTN1O94822 1766 aa21.01■□□□□ 0.95
TRIM13-201ENST00000356017 NWD2Q9ULI1 1742 aa21.01■□□□□ 0.95
TRIM13-201ENST00000356017 SMG6Q86US8 1419 aaKnown RBP21■□□□□ 0.95
TRIM13-201ENST00000356017 PRKRIP1Q9H875 184 aaPredicted RBP21■□□□□ 0.95
TRIM13-201ENST00000356017 INSRP06213 1382 aa21■□□□□ 0.95
TRIM13-201ENST00000356017 MTHFSP49914 203 aa21■□□□□ 0.95
TRIM13-201ENST00000356017 STRN4Q9NRL3 753 aa21■□□□□ 0.95
TRIM13-201ENST00000356017 COL18A1P39060 1754 aa20.99■□□□□ 0.95
TRIM13-201ENST00000356017 PLCH1Q4KWH8 1693 aa20.99■□□□□ 0.95
TRIM13-201ENST00000356017 ANP32CO43423 234 aa20.99■□□□□ 0.95
TRIM13-201ENST00000356017 PPP2R1AP30153 589 aa20.99■□□□□ 0.95
TRIM13-201ENST00000356017 TRPC5Q9UL62 973 aaPredicted RBP20.99■□□□□ 0.95
TRIM13-201ENST00000356017 COL5A2P05997 1499 aaPredicted RBP20.98■□□□□ 0.95
TRIM13-201ENST00000356017 HSP90AB2PQ58FF8 381 aa20.98■□□□□ 0.95
TRIM13-201ENST00000356017 MAP2P11137 1827 aaKnown RBP20.98■□□□□ 0.95
TRIM13-201ENST00000356017 ERBB3P21860 1342 aa20.97■□□□□ 0.95
TRIM13-201ENST00000356017 VPS72Q15906 364 aa20.97■□□□□ 0.95
TRIM13-201ENST00000356017 ANKRD24Q8TF21 1146 aa20.97■□□□□ 0.95
TRIM13-201ENST00000356017 WDR17Q8IZU2 1322 aa20.97■□□□□ 0.95
TRIM13-201ENST00000356017 CSB-PGBD3P0DP91 1061 aa20.96■□□□□ 0.95
TRIM13-201ENST00000356017 QTRT2Q9H974 415 aaKnown RBP20.96■□□□□ 0.95
TRIM13-201ENST00000356017 CDK12Q9NYV4 1490 aaPredicted RBP20.96■□□□□ 0.95
TRIM13-201ENST00000356017 MYBBP1AQ9BQG0 1328 aaKnown RBP20.96■□□□□ 0.95
TRIM13-201ENST00000356017 CFAP53Q96M91 514 aa20.95■□□□□ 0.94
TRIM13-201ENST00000356017 RGS17Q9UGC6 210 aaPredicted RBP20.95■□□□□ 0.94
TRIM13-201ENST00000356017 TOM1L2Q6ZVM7 507 aa20.94■□□□□ 0.94
TRIM13-201ENST00000356017 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.94■□□□□ 0.94
TRIM13-201ENST00000356017 PEAK1Q9H792 1746 aa20.94■□□□□ 0.94
TRIM13-201ENST00000356017 CCDC9Q9Y3X0 531 aaKnown RBP20.94■□□□□ 0.94
TRIM13-201ENST00000356017 LARP1Q6PKG0 1096 aaKnown RBP20.93■□□□□ 0.94
TRIM13-201ENST00000356017 LTV1Q96GA3 475 aaPredicted RBP20.93■□□□□ 0.94
TRIM13-201ENST00000356017 ATRNO75882 1429 aa20.93■□□□□ 0.94
TRIM13-201ENST00000356017 CRB1P82279 1406 aa20.93■□□□□ 0.94
TRIM13-201ENST00000356017 NRAPQ86VF7 1730 aa20.92■□□□□ 0.94
TRIM13-201ENST00000356017 GJD4Q96KN9 370 aaPredicted RBP20.92■□□□□ 0.94
TRIM13-201ENST00000356017 SPATA31A5Q5VU36 1347 aa20.91■□□□□ 0.94
TRIM13-201ENST00000356017 SPATA31A7Q8IWB4 1347 aa20.91■□□□□ 0.94
TRIM13-201ENST00000356017 DIEXFQ68CQ4 756 aaKnown RBP20.91■□□□□ 0.94
TRIM13-201ENST00000356017 CARD10Q9BWT7 1032 aa20.91■□□□□ 0.94
TRIM13-201ENST00000356017 NLRP2Q9NX02 1062 aa20.91■□□□□ 0.94
TRIM13-201ENST00000356017 SPATA31A1Q5TZJ5 1347 aa20.9■□□□□ 0.94
TRIM13-201ENST00000356017 EIF4A2Q14240 407 aaKnown RBP20.89■□□□□ 0.94
TRIM13-201ENST00000356017 THRAP3Q9Y2W1 955 aaKnown RBP20.89■□□□□ 0.94
TRIM13-201ENST00000356017 RGPD5Q99666 1765 aa20.89■□□□□ 0.94
TRIM13-201ENST00000356017 DIAPH1O60610 1272 aaKnown RBP20.89■□□□□ 0.93
TRIM13-201ENST00000356017 RBM6P78332 1123 aaKnown RBP20.89■□□□□ 0.93
TRIM13-201ENST00000356017 RXRBP28702 533 aa20.88■□□□□ 0.93
TRIM13-201ENST00000356017 TCP11L2Q8N4U5 519 aa20.88■□□□□ 0.93
TRIM13-201ENST00000356017 USP35Q9P2H5 1018 aa20.88■□□□□ 0.93
TRIM13-201ENST00000356017 POTEAQ6S8J7 498 aa20.87■□□□□ 0.93
TRIM13-201ENST00000356017 IL13P35225 146 aa20.86■□□□□ 0.93
TRIM13-201ENST00000356017 FAM208AQ9UK61 1670 aaKnown RBP20.86■□□□□ 0.93
TRIM13-201ENST00000356017 NBPF6Q5VWK0 638 aa20.86■□□□□ 0.93
TRIM13-201ENST00000356017 NBPF4Q96M43 638 aa20.86■□□□□ 0.93
TRIM13-201ENST00000356017 NUDCQ9Y266 331 aa20.86■□□□□ 0.93
TRIM13-201ENST00000356017 BARGINQ6ZT62 677 aa20.85■□□□□ 0.93
TRIM13-201ENST00000356017 EYA1Q99502 592 aa20.84■□□□□ 0.93
TRIM13-201ENST00000356017 CDCA7Q9BWT1 371 aaPredicted RBP20.83■□□□□ 0.93
TRIM13-201ENST00000356017 COL3A1P02461 1466 aaPredicted RBP20.83■□□□□ 0.92
TRIM13-201ENST00000356017 ONECUT3O60422 494 aaPredicted RBP20.82■□□□□ 0.92
TRIM13-201ENST00000356017 IGSF1Q8N6C5 1336 aa20.82■□□□□ 0.92
TRIM13-201ENST00000356017 FAM98CQ17RN3 349 aaKnown RBP20.82■□□□□ 0.92
TRIM13-201ENST00000356017 GLI3P10071 1580 aa20.8■□□□□ 0.92
TRIM13-201ENST00000356017 U2SURPO15042 1029 aaKnown RBP20.79■□□□□ 0.92
TRIM13-201ENST00000356017 IL2RBP14784 551 aa20.79■□□□□ 0.92
TRIM13-201ENST00000356017 USHBP1Q8N6Y0 703 aa20.79■□□□□ 0.92
TRIM13-201ENST00000356017 NCAPD2Q15021 1401 aa20.79■□□□□ 0.92
TRIM13-201ENST00000356017 RAPGEF4Q8WZA2 1011 aa20.78■□□□□ 0.92
TRIM13-201ENST00000356017 A0A0G2JS52 829 aa20.78■□□□□ 0.92
TRIM13-201ENST00000356017 MYT1Q01538 1121 aa20.78■□□□□ 0.92
TRIM13-201ENST00000356017 SULT6B1Q6IMI4 303 aa20.77■□□□□ 0.92
TRIM13-201ENST00000356017 SEPT12Q8IYM1 358 aa20.76■□□□□ 0.91
TRIM13-201ENST00000356017 KDRP35968 1356 aa20.76■□□□□ 0.91
TRIM13-201ENST00000356017 U2AF1L5P0DN76 240 aaPredicted RBP20.75■□□□□ 0.91
TRIM13-201ENST00000356017 TATP17735 454 aaPredicted RBP20.75■□□□□ 0.91
TRIM13-201ENST00000356017 U2AF1Q01081 240 aaKnown RBP eCLIP20.75■□□□□ 0.91
TRIM13-201ENST00000356017 DISP2A7MBM2 1401 aa20.74■□□□□ 0.91
TRIM13-201ENST00000356017 RGPD2P0DJD1 1756 aa20.74■□□□□ 0.91
TRIM13-201ENST00000356017 RGPD1P0DJD0 1748 aa20.74■□□□□ 0.91
TRIM13-201ENST00000356017 MRS2Q9HD23 443 aa20.74■□□□□ 0.91
TRIM13-201ENST00000356017 PLEKHG2Q9H7P9 1386 aa20.74■□□□□ 0.91
TRIM13-201ENST00000356017 EXOC5O00471 708 aa20.73■□□□□ 0.91
TRIM13-201ENST00000356017 WDR43Q15061 677 aaKnown RBP eCLIP20.73■□□□□ 0.91
TRIM13-201ENST00000356017 DDB1Q16531 1140 aa20.73■□□□□ 0.91
TRIM13-201ENST00000356017 FCHSD2O94868 740 aa20.72■□□□□ 0.91
TRIM13-201ENST00000356017 HMOX1P09601 288 aa20.72■□□□□ 0.91
TRIM13-201ENST00000356017 AEBP1Q8IUX7 1158 aa20.72■□□□□ 0.91
TRIM13-201ENST00000356017 CCER2I3L3R5 266 aa20.71■□□□□ 0.91
TRIM13-201ENST00000356017 PNNQ9H307 717 aaKnown RBP20.71■□□□□ 0.91
TRIM13-201ENST00000356017 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.71■□□□□ 0.912e-6■■□□□ 13.2
TRIM13-201ENST00000356017 MEGF6O75095 1541 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms