RNA–Protein interactions for RNA: ENST00000303904.7

COPS6-201, Transcript of COP9 signalosome subunit 6, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COPS6, Length 1,432 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-201ENST00000303904 GLI3P10071 1580 aa39.33■■■■□ 3.89
COPS6-201ENST00000303904 COL5A2P05997 1499 aaPredicted RBP39.32■■■■□ 3.89
COPS6-201ENST00000303904 CCDC7Q96M83 1385 aa39.32■■■■□ 3.88
COPS6-201ENST00000303904 KNSTRNQ9Y448 316 aa39.3■■■■□ 3.88
COPS6-201ENST00000303904 SPATA31A1Q5TZJ5 1347 aa39.28■■■■□ 3.88
COPS6-201ENST00000303904 A0A0G2JS52 829 aa39.27■■■■□ 3.88
COPS6-201ENST00000303904 MYT1Q01538 1121 aa39.27■■■■□ 3.88
COPS6-201ENST00000303904 COL18A1P39060 1754 aa39.26■■■■□ 3.88
COPS6-201ENST00000303904 LARP1Q6PKG0 1096 aaKnown RBP39.26■■■■□ 3.88
COPS6-201ENST00000303904 WASHC2AQ641Q2 1341 aa39.26■■■■□ 3.88
COPS6-201ENST00000303904 ONECUT3O60422 494 aaPredicted RBP39.25■■■■□ 3.87
COPS6-201ENST00000303904 CSB-PGBD3P0DP91 1061 aa39.25■■■■□ 3.87
COPS6-201ENST00000303904 AXIN2Q9Y2T1 843 aa39.25■■■■□ 3.87
COPS6-201ENST00000303904 LTN1O94822 1766 aa39.25■■■■□ 3.87
COPS6-201ENST00000303904 NSD2O96028 1365 aa39.24■■■■□ 3.87
COPS6-201ENST00000303904 CRB1P82279 1406 aa39.24■■■■□ 3.87
COPS6-201ENST00000303904 FAM98CQ17RN3 349 aaKnown RBP39.24■■■■□ 3.87
COPS6-201ENST00000303904 WDR17Q8IZU2 1322 aa39.23■■■■□ 3.87
COPS6-201ENST00000303904 TOM1L2Q6ZVM7 507 aa39.23■■■■□ 3.87
COPS6-201ENST00000303904 USP35Q9P2H5 1018 aa39.23■■■■□ 3.87
COPS6-201ENST00000303904 THRAP3Q9Y2W1 955 aaKnown RBP39.23■■■■□ 3.87
COPS6-201ENST00000303904 AMPHP49418 695 aa39.23■■■■□ 3.87
COPS6-201ENST00000303904 SEPT12Q8IYM1 358 aa39.23■■■■□ 3.87
COPS6-201ENST00000303904 BLMP54132 1417 aaPredicted RBP39.22■■■■□ 3.87
COPS6-201ENST00000303904 TCP11L2Q8N4U5 519 aa39.21■■■■□ 3.87
COPS6-201ENST00000303904 MAP3K19Q56UN5 1328 aa39.2■■■■□ 3.87
COPS6-201ENST00000303904 IP6K1Q92551 441 aa39.2■■■■□ 3.87
COPS6-201ENST00000303904 RTL1A6NKG5 1358 aa39.18■■■■□ 3.86
COPS6-201ENST00000303904 BARGINQ6ZT62 677 aa39.17■■■■□ 3.86
COPS6-201ENST00000303904 KIF24Q5T7B8 1368 aa39.15■■■■□ 3.86
COPS6-201ENST00000303904 ERBB3P21860 1342 aa39.15■■■■□ 3.86
COPS6-201ENST00000303904 RRS1Q15050 365 aaKnown RBP39.14■■■■□ 3.86
COPS6-201ENST00000303904 RGPD5Q99666 1765 aa39.12■■■■□ 3.85
COPS6-201ENST00000303904 HOXC9P31274 260 aa39.12■■■■□ 3.85
COPS6-201ENST00000303904 ANKRD24Q8TF21 1146 aa39.12■■■■□ 3.85
COPS6-201ENST00000303904 CARD10Q9BWT7 1032 aa39.12■■■■□ 3.85
COPS6-201ENST00000303904 ANKRD26Q9UPS8 1709 aa39.11■■■■□ 3.85
COPS6-201ENST00000303904 FBLN1P23142 703 aa39.11■■■■□ 3.85
COPS6-201ENST00000303904 KRT27Q7Z3Y8 459 aa39.08■■■■□ 3.85
COPS6-201ENST00000303904 MORC1Q86VD1 984 aa39.08■■■■□ 3.85
COPS6-201ENST00000303904 FLT4P35916 1363 aa39.08■■■■□ 3.85
COPS6-201ENST00000303904 CDCA7Q9BWT1 371 aaPredicted RBP39.07■■■■□ 3.85
COPS6-201ENST00000303904 NLRP2Q9NX02 1062 aa39.07■■■■□ 3.85
COPS6-201ENST00000303904 SMG6Q86US8 1419 aaKnown RBP39.07■■■■□ 3.84
COPS6-201ENST00000303904 THSD7AQ9UPZ6 1657 aa39.05■■■■□ 3.84
COPS6-201ENST00000303904 PER1O15534 1290 aaPredicted RBP39.04■■■■□ 3.84
COPS6-201ENST00000303904 AMER1Q5JTC6 1135 aaPredicted RBP39.04■■■■□ 3.84
COPS6-201ENST00000303904 TNNT2P45379 298 aaPredicted RBP39.03■■■■□ 3.84
COPS6-201ENST00000303904 LTV1Q96GA3 475 aaPredicted RBP39.03■■■■□ 3.84
COPS6-201ENST00000303904 PPM1GO15355 546 aaPredicted RBP39.02■■■■□ 3.84
COPS6-201ENST00000303904 FAM208AQ9UK61 1670 aaKnown RBP39■■■■□ 3.83
COPS6-201ENST00000303904 INSRP06213 1382 aa39■■■■□ 3.83
COPS6-201ENST00000303904 PDE3BQ13370 1112 aa39■■■■□ 3.83
COPS6-201ENST00000303904 BRWD3Q6RI45 1802 aa38.99■■■■□ 3.83
COPS6-201ENST00000303904 EMILIN1Q9Y6C2 1016 aa38.99■■■■□ 3.83
COPS6-201ENST00000303904 NPC1L1Q9UHC9 1359 aa38.97■■■■□ 3.83
COPS6-201ENST00000303904 UPF1Q92900 1129 aaKnown RBP eCLIP38.96■■■■□ 3.83
COPS6-201ENST00000303904 POLKQ9UBT6 870 aa38.96■■■■□ 3.83
COPS6-201ENST00000303904 HSP90AB2PQ58FF8 381 aa38.95■■■■□ 3.83
COPS6-201ENST00000303904 DDB1Q16531 1140 aa38.94■■■■□ 3.82
COPS6-201ENST00000303904 MAP2P11137 1827 aaKnown RBP38.93■■■■□ 3.82
COPS6-201ENST00000303904 CC2D1BQ5T0F9 858 aaKnown RBP38.92■■■■□ 3.82
COPS6-201ENST00000303904 PARP4Q9UKK3 1724 aaKnown RBP38.92■■■■□ 3.82
COPS6-201ENST00000303904 CCDC125Q86Z20 511 aa38.9■■■■□ 3.82
COPS6-201ENST00000303904 PEAK1Q9H792 1746 aa38.9■■■■□ 3.82
COPS6-201ENST00000303904 IL2RBP14784 551 aa38.89■■■■□ 3.82
COPS6-201ENST00000303904 WNK3Q9BYP7 1800 aa38.87■■■■□ 3.81
COPS6-201ENST00000303904 EXOC5O00471 708 aa38.87■■■■□ 3.81
COPS6-201ENST00000303904 DISP2A7MBM2 1401 aa38.86■■■■□ 3.81
COPS6-201ENST00000303904 FAM196AQ6ZSG2 479 aa38.86■■■■□ 3.81
COPS6-201ENST00000303904 SF3B2Q13435 895 aaKnown RBP38.83■■■■□ 3.81
COPS6-201ENST00000303904 LRRC37A3O60309 1634 aa38.81■■■■□ 3.8
COPS6-201ENST00000303904 EP400Q96L91 3159 aa38.8■■■■□ 3.8
COPS6-201ENST00000303904 CNGB1Q14028 1251 aaPredicted RBP38.8■■■■□ 3.8
COPS6-201ENST00000303904 NBPF6Q5VWK0 638 aa38.8■■■■□ 3.8
COPS6-201ENST00000303904 NBPF4Q96M43 638 aa38.8■■■■□ 3.8
COPS6-201ENST00000303904 TNS2Q63HR2 1409 aa38.78■■■■□ 3.8
COPS6-201ENST00000303904 RAPGEF4Q8WZA2 1011 aa38.78■■■■□ 3.8
COPS6-201ENST00000303904 OVOS2A0A0G2JMS6 1433 aa38.77■■■■□ 3.8
COPS6-201ENST00000303904 FAM182BQ5T319 152 aa38.77■■■■□ 3.8
COPS6-201ENST00000303904 EIF4A2Q14240 407 aaKnown RBP38.72■■■■□ 3.79
COPS6-201ENST00000303904 RGPD2P0DJD1 1756 aa38.72■■■■□ 3.79
COPS6-201ENST00000303904 MTHFSP49914 203 aa38.72■■■■□ 3.79
COPS6-201ENST00000303904 USHBP1Q8N6Y0 703 aa38.72■■■■□ 3.79
COPS6-201ENST00000303904 TATP17735 454 aaPredicted RBP38.71■■■■□ 3.79
COPS6-201ENST00000303904 DDX10Q13206 875 aaKnown RBP38.69■■■■□ 3.78
COPS6-201ENST00000303904 EYA1Q99502 592 aa38.68■■■■□ 3.78
COPS6-201ENST00000303904 MARCH10Q8NA82 808 aaPredicted RBP38.67■■■■□ 3.78
COPS6-201ENST00000303904 ZCRB1Q8TBF4 217 aaKnown RBP38.64■■■■□ 3.78
COPS6-201ENST00000303904 BCL9O00512 1426 aa38.63■■■■□ 3.78
COPS6-201ENST00000303904 RGPD1P0DJD0 1748 aa38.63■■■■□ 3.78
COPS6-201ENST00000303904 BAG6P46379 1132 aa38.63■■■■□ 3.78
COPS6-201ENST00000303904 MEGF6O75095 1541 aa38.63■■■■□ 3.77
COPS6-201ENST00000303904 NCAPD2Q15021 1401 aa38.63■■■■□ 3.77
COPS6-201ENST00000303904 TRIM37O94972 964 aa38.63■■■■□ 3.77
COPS6-201ENST00000303904 DDX54Q8TDD1 881 aaKnown RBP38.6■■■■□ 3.77
COPS6-201ENST00000303904 IGSF1Q8N6C5 1336 aa38.6■■■■□ 3.77
COPS6-201ENST00000303904 CFAP53Q96M91 514 aa38.59■■■■□ 3.77
COPS6-201ENST00000303904 DIAPH1O60610 1272 aaKnown RBP38.56■■■■□ 3.76
COPS6-201ENST00000303904 PLEKHG2Q9H7P9 1386 aa38.56■■■■□ 3.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms