RNA–Protein interactions for RNA: ENST00000264254.10

PDCL3-201, Transcript of phosducin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCL3, Length 1,337 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCL3-201ENST00000264254 FBLN1P23142 703 aa23.24■■□□□ 1.31
PDCL3-201ENST00000264254 CNGB1Q14028 1251 aaPredicted RBP23.24■■□□□ 1.31
PDCL3-201ENST00000264254 TRPC5Q9UL62 973 aaPredicted RBP23.24■■□□□ 1.31
PDCL3-201ENST00000264254 ANKRD26Q9UPS8 1709 aa23.24■■□□□ 1.31
PDCL3-201ENST00000264254 BCL9LQ86UU0 1499 aa23.23■■□□□ 1.31
PDCL3-201ENST00000264254 PPM1GO15355 546 aaPredicted RBP23.23■■□□□ 1.31
PDCL3-201ENST00000264254 EMILIN1Q9Y6C2 1016 aa23.23■■□□□ 1.31
PDCL3-201ENST00000264254 PARD3Q8TEW0 1356 aa23.23■■□□□ 1.31
PDCL3-201ENST00000264254 AXIN2Q9Y2T1 843 aa23.22■■□□□ 1.31
PDCL3-201ENST00000264254 VPS72Q15906 364 aa23.21■■□□□ 1.31
PDCL3-201ENST00000264254 INSRP06213 1382 aa23.21■■□□□ 1.31
PDCL3-201ENST00000264254 SMG6Q86US8 1419 aaKnown RBP23.2■■□□□ 1.31
PDCL3-201ENST00000264254 QTRT2Q9H974 415 aaKnown RBP23.2■■□□□ 1.3
PDCL3-201ENST00000264254 STRN4Q9NRL3 753 aa23.2■■□□□ 1.3
PDCL3-201ENST00000264254 CAMTA1Q9Y6Y1 1673 aa23.2■■□□□ 1.3
PDCL3-201ENST00000264254 CSB-PGBD3P0DP91 1061 aa23.19■■□□□ 1.3
PDCL3-201ENST00000264254 COL5A2P05997 1499 aaPredicted RBP23.19■■□□□ 1.3
PDCL3-201ENST00000264254 ERBB3P21860 1342 aa23.19■■□□□ 1.3
PDCL3-201ENST00000264254 WDR17Q8IZU2 1322 aa23.19■■□□□ 1.3
PDCL3-201ENST00000264254 LMO7Q8WWI1 1683 aa23.18■■□□□ 1.3
PDCL3-201ENST00000264254 MTHFSP49914 203 aa23.18■■□□□ 1.3
PDCL3-201ENST00000264254 ANKRD24Q8TF21 1146 aa23.18■■□□□ 1.3
PDCL3-201ENST00000264254 NWD2Q9ULI1 1742 aa23.18■■□□□ 1.3
PDCL3-201ENST00000264254 ANP32CO43423 234 aa23.17■■□□□ 1.3
PDCL3-201ENST00000264254 PPP2R1AP30153 589 aa23.17■■□□□ 1.3
PDCL3-201ENST00000264254 HSP90AB2PQ58FF8 381 aa23.17■■□□□ 1.3
PDCL3-201ENST00000264254 PRKRIP1Q9H875 184 aaPredicted RBP23.17■■□□□ 1.3
PDCL3-201ENST00000264254 RGS17Q9UGC6 210 aaPredicted RBP23.17■■□□□ 1.3
PDCL3-201ENST00000264254 CFAP53Q96M91 514 aa23.16■■□□□ 1.3
PDCL3-201ENST00000264254 CCDC9Q9Y3X0 531 aaKnown RBP23.16■■□□□ 1.3
PDCL3-201ENST00000264254 ATRNO75882 1429 aa23.16■■□□□ 1.3
PDCL3-201ENST00000264254 TOM1L2Q6ZVM7 507 aa23.15■■□□□ 1.3
PDCL3-201ENST00000264254 GJD4Q96KN9 370 aaPredicted RBP23.15■■□□□ 1.3
PDCL3-201ENST00000264254 CDK12Q9NYV4 1490 aaPredicted RBP23.15■■□□□ 1.3
PDCL3-201ENST00000264254 CRB1P82279 1406 aa23.14■■□□□ 1.3
PDCL3-201ENST00000264254 LARP1Q6PKG0 1096 aaKnown RBP23.14■■□□□ 1.3
PDCL3-201ENST00000264254 THRAP3Q9Y2W1 955 aaKnown RBP23.14■■□□□ 1.3
PDCL3-201ENST00000264254 MYBBP1AQ9BQG0 1328 aaKnown RBP23.14■■□□□ 1.29
PDCL3-201ENST00000264254 PLCH1Q4KWH8 1693 aa23.14■■□□□ 1.29
PDCL3-201ENST00000264254 COL18A1P39060 1754 aa23.13■■□□□ 1.29
PDCL3-201ENST00000264254 RBM6P78332 1123 aaKnown RBP23.13■■□□□ 1.29
PDCL3-201ENST00000264254 CARD10Q9BWT7 1032 aa23.13■■□□□ 1.29
PDCL3-201ENST00000264254 SPATA31A5Q5VU36 1347 aa23.13■■□□□ 1.29
PDCL3-201ENST00000264254 SPATA31A7Q8IWB4 1347 aa23.13■■□□□ 1.29
PDCL3-201ENST00000264254 RXRBP28702 533 aa23.12■■□□□ 1.29
PDCL3-201ENST00000264254 LTV1Q96GA3 475 aaPredicted RBP23.12■■□□□ 1.29
PDCL3-201ENST00000264254 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.12■■□□□ 1.29
PDCL3-201ENST00000264254 NLRP2Q9NX02 1062 aa23.11■■□□□ 1.29
PDCL3-201ENST00000264254 SPATA31A1Q5TZJ5 1347 aa23.11■■□□□ 1.29
PDCL3-201ENST00000264254 LTN1O94822 1766 aa23.11■■□□□ 1.29
PDCL3-201ENST00000264254 TCP11L2Q8N4U5 519 aa23.1■■□□□ 1.29
PDCL3-201ENST00000264254 DIAPH1O60610 1272 aaKnown RBP23.08■■□□□ 1.29
PDCL3-201ENST00000264254 EIF4A2Q14240 407 aaKnown RBP23.08■■□□□ 1.29
PDCL3-201ENST00000264254 POTEAQ6S8J7 498 aa23.08■■□□□ 1.29
PDCL3-201ENST00000264254 CDCA7Q9BWT1 371 aaPredicted RBP23.08■■□□□ 1.29
PDCL3-201ENST00000264254 NRAPQ86VF7 1730 aa23.08■■□□□ 1.29
PDCL3-201ENST00000264254 BARGINQ6ZT62 677 aa23.08■■□□□ 1.28
PDCL3-201ENST00000264254 PEAK1Q9H792 1746 aa23.07■■□□□ 1.28
PDCL3-201ENST00000264254 USP35Q9P2H5 1018 aa23.07■■□□□ 1.28
PDCL3-201ENST00000264254 NUDCQ9Y266 331 aa23.07■■□□□ 1.28
PDCL3-201ENST00000264254 MSH5O43196 834 aa23.06■■□□□ 1.28
PDCL3-201ENST00000264254 ONECUT3O60422 494 aaPredicted RBP23.06■■□□□ 1.28
PDCL3-201ENST00000264254 IL13P35225 146 aa23.05■■□□□ 1.28
PDCL3-201ENST00000264254 NBPF6Q5VWK0 638 aa23.04■■□□□ 1.28
PDCL3-201ENST00000264254 DIEXFQ68CQ4 756 aaKnown RBP23.04■■□□□ 1.28
PDCL3-201ENST00000264254 NBPF4Q96M43 638 aa23.04■■□□□ 1.28
PDCL3-201ENST00000264254 MAP2P11137 1827 aaKnown RBP23.03■■□□□ 1.28
PDCL3-201ENST00000264254 EYA1Q99502 592 aa23.02■■□□□ 1.28
PDCL3-201ENST00000264254 IGSF1Q8N6C5 1336 aa23.01■■□□□ 1.27
PDCL3-201ENST00000264254 FAM98CQ17RN3 349 aaKnown RBP23.01■■□□□ 1.27
PDCL3-201ENST00000264254 FAM208AQ9UK61 1670 aaKnown RBP23■■□□□ 1.27
PDCL3-201ENST00000264254 IL2RBP14784 551 aa23■■□□□ 1.27
PDCL3-201ENST00000264254 RAPGEF4Q8WZA2 1011 aa23■■□□□ 1.27
PDCL3-201ENST00000264254 PLEKHG2Q9H7P9 1386 aa22.99■■□□□ 1.27
PDCL3-201ENST00000264254 COL3A1P02461 1466 aaPredicted RBP22.98■■□□□ 1.27
PDCL3-201ENST00000264254 A0A0G2JS52 829 aa22.98■■□□□ 1.27
PDCL3-201ENST00000264254 MYT1Q01538 1121 aa22.98■■□□□ 1.27
PDCL3-201ENST00000264254 GLI3P10071 1580 aa22.97■■□□□ 1.27
PDCL3-201ENST00000264254 NCAPD2Q15021 1401 aa22.97■■□□□ 1.27
PDCL3-201ENST00000264254 SEPT12Q8IYM1 358 aa22.97■■□□□ 1.27
PDCL3-201ENST00000264254 U2SURPO15042 1029 aaKnown RBP22.96■■□□□ 1.27
PDCL3-201ENST00000264254 TATP17735 454 aaPredicted RBP22.96■■□□□ 1.27
PDCL3-201ENST00000264254 RGPD5Q99666 1765 aa22.94■■□□□ 1.26
PDCL3-201ENST00000264254 KDRP35968 1356 aa22.94■■□□□ 1.26
PDCL3-201ENST00000264254 SULT6B1Q6IMI4 303 aa22.94■■□□□ 1.26
PDCL3-201ENST00000264254 USHBP1Q8N6Y0 703 aa22.94■■□□□ 1.26
PDCL3-201ENST00000264254 DISP2A7MBM2 1401 aa22.94■■□□□ 1.26
PDCL3-201ENST00000264254 EXOC5O00471 708 aa22.93■■□□□ 1.26
PDCL3-201ENST00000264254 DDB1Q16531 1140 aa22.93■■□□□ 1.26
PDCL3-201ENST00000264254 PNNQ9H307 717 aaKnown RBP22.93■■□□□ 1.26
PDCL3-201ENST00000264254 U2AF1L5P0DN76 240 aaPredicted RBP22.92■■□□□ 1.26
PDCL3-201ENST00000264254 U2AF1Q01081 240 aaKnown RBP eCLIP22.92■■□□□ 1.26
PDCL3-201ENST00000264254 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.92■■□□□ 1.26
PDCL3-201ENST00000264254 PDE3BQ13370 1112 aa22.91■■□□□ 1.26
PDCL3-201ENST00000264254 FCHSD2O94868 740 aa22.9■■□□□ 1.26
PDCL3-201ENST00000264254 WDR43Q15061 677 aaKnown RBP eCLIP22.9■■□□□ 1.26
PDCL3-201ENST00000264254 OVOS2A0A0G2JMS6 1433 aa22.89■■□□□ 1.26
PDCL3-201ENST00000264254 RGS12O14924 1447 aa22.89■■□□□ 1.26
PDCL3-201ENST00000264254 SPG7Q9UQ90 795 aa22.89■■□□□ 1.26
PDCL3-201ENST00000264254 AMOTQ4VCS5 1084 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms