RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 TAF4BQ92750 862 aa16.33■□□□□ 0.21
TARDBP-201ENST00000240185 DNAJC2Q99543 621 aaKnown RBP16.33■□□□□ 0.21
TARDBP-201ENST00000240185 ABCC8Q09428 1581 aa16.33■□□□□ 0.2
TARDBP-201ENST00000240185 KIAA1328Q86T90 577 aa16.33■□□□□ 0.2
TARDBP-201ENST00000240185 WASHC2CQ9Y4E1 1318 aa16.33■□□□□ 0.2
TARDBP-201ENST00000240185 ANKRD1Q15327 319 aa16.33■□□□□ 0.2
TARDBP-201ENST00000240185 MAP9Q49MG5 647 aa16.33■□□□□ 0.2
TARDBP-201ENST00000240185 URI1O94763 535 aaPredicted RBP16.32■□□□□ 0.2
TARDBP-201ENST00000240185 SFPQP23246 707 aaKnown RBP eCLIP16.32■□□□□ 0.2
TARDBP-201ENST00000240185 CFAP100Q494V2 611 aa16.32■□□□□ 0.2
TARDBP-201ENST00000240185 SMTNL1A8MU46 457 aa16.32■□□□□ 0.2
TARDBP-201ENST00000240185 AIMP1Q12904 312 aaKnown RBP16.32■□□□□ 0.2
TARDBP-201ENST00000240185 MICALCLQ6ZW33 695 aa16.32■□□□□ 0.2
TARDBP-201ENST00000240185 JAKMIP3Q5VZ66 844 aa16.31■□□□□ 0.2
TARDBP-201ENST00000240185 CCDC113Q9H0I3 377 aa16.31■□□□□ 0.2
TARDBP-201ENST00000240185 HMOX1P09601 288 aa16.31■□□□□ 0.2
TARDBP-201ENST00000240185 IKQ13123 557 aaPredicted RBP16.31■□□□□ 0.2
TARDBP-201ENST00000240185 TBC1D2BQ9UPU7 963 aa16.31■□□□□ 0.2
TARDBP-201ENST00000240185 MINK1Q8N4C8 1332 aaPredicted RBP16.31■□□□□ 0.2
TARDBP-201ENST00000240185 MAP3K11Q16584 847 aa16.31■□□□□ 0.2
TARDBP-201ENST00000240185 PDE3AQ14432 1141 aa16.3■□□□□ 0.2
TARDBP-201ENST00000240185 ADAMTS8Q9UP79 889 aa16.3■□□□□ 0.2
TARDBP-201ENST00000240185 PPP4R3BQ5MIZ7 849 aa16.3■□□□□ 0.2
TARDBP-201ENST00000240185 ZSCAN12O43309 604 aa16.3■□□□□ 0.2
TARDBP-201ENST00000240185 ZHX3Q9H4I2 956 aa16.3■□□□□ 0.2
TARDBP-201ENST00000240185 C1orf115Q9H7X2 142 aa16.3■□□□□ 0.2
TARDBP-201ENST00000240185 TMEM132AQ24JP5 1023 aa16.3■□□□□ 0.2
TARDBP-201ENST00000240185 CCDC91Q7Z6B0 441 aa16.3■□□□□ 0.2
TARDBP-201ENST00000240185 CCDC7Q96M83 1385 aa16.29■□□□□ 0.2
TARDBP-201ENST00000240185 SEPT11Q9NVA2 429 aaKnown RBP16.29■□□□□ 0.2
TARDBP-201ENST00000240185 EIF5P55010 431 aaKnown RBP16.29■□□□□ 0.2
TARDBP-201ENST00000240185 TRIM22Q8IYM9 498 aa16.29■□□□□ 0.2
TARDBP-201ENST00000240185 TNNT1P13805 278 aa16.28■□□□□ 0.2
TARDBP-201ENST00000240185 MNAT1P51948 309 aa16.28■□□□□ 0.2
TARDBP-201ENST00000240185 KIF4BQ2VIQ3 1234 aa16.28■□□□□ 0.2
TARDBP-201ENST00000240185 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
TARDBP-201ENST00000240185 TIGD1Q96MW7 591 aa16.27■□□□□ 0.2
TARDBP-201ENST00000240185 MCM3P25205 808 aa16.27■□□□□ 0.2
TARDBP-201ENST00000240185 SPDYE4A6NLX3 237 aa16.27■□□□□ 0.19
TARDBP-201ENST00000240185 KIF5CO60282 957 aa16.27■□□□□ 0.19
TARDBP-201ENST00000240185 BBXQ8WY36 941 aaPredicted RBP16.27■□□□□ 0.19
TARDBP-201ENST00000240185 CASQ1P31415 396 aa16.26■□□□□ 0.19
TARDBP-201ENST00000240185 IMMTQ16891 758 aaKnown RBP16.26■□□□□ 0.19
TARDBP-201ENST00000240185 UACAQ9BZF9 1416 aa16.26■□□□□ 0.19
TARDBP-201ENST00000240185 MSH5O43196 834 aa16.26■□□□□ 0.19
TARDBP-201ENST00000240185 SMC1AQ14683 1233 aaKnown RBP16.26■□□□□ 0.19
TARDBP-201ENST00000240185 CNTLNQ9NXG0 1405 aa16.26■□□□□ 0.19
TARDBP-201ENST00000240185 BRD4O60885 1362 aaPredicted RBP16.26■□□□□ 0.19
TARDBP-201ENST00000240185 VGFO15240 615 aaPredicted RBP16.26■□□□□ 0.19
TARDBP-201ENST00000240185 SMARCA2P51531 1590 aa16.26■□□□□ 0.19
TARDBP-201ENST00000240185 EVA1CP58658 441 aa16.26■□□□□ 0.19
TARDBP-201ENST00000240185 TCP11L2Q8N4U5 519 aa16.26■□□□□ 0.19
TARDBP-201ENST00000240185 CAMK4Q16566 473 aa16.25■□□□□ 0.19
TARDBP-201ENST00000240185 PPP6R1Q9UPN7 881 aa16.25■□□□□ 0.19
TARDBP-201ENST00000240185 CCDC175P0C221 793 aa16.25■□□□□ 0.19
TARDBP-201ENST00000240185 GTF2A1P52655 376 aaPredicted RBP16.25■□□□□ 0.19
TARDBP-201ENST00000240185 DNAAF4Q8WXU2 420 aa16.25■□□□□ 0.19
TARDBP-201ENST00000240185 CEP63Q96MT8 703 aa16.25■□□□□ 0.19
TARDBP-201ENST00000240185 LMAN1P49257 510 aa16.25■□□□□ 0.19
TARDBP-201ENST00000240185 IFFO1Q0D2I5 559 aa16.25■□□□□ 0.19
TARDBP-201ENST00000240185 C16orf45Q96MC5 204 aaPredicted RBP16.25■□□□□ 0.19
TARDBP-201ENST00000240185 EXOSC9Q06265 439 aaKnown RBP16.24■□□□□ 0.19
TARDBP-201ENST00000240185 BLOC1S2Q6QNY1 142 aa16.24■□□□□ 0.19
TARDBP-201ENST00000240185 ZSCAN31Q96LW9 406 aaPredicted RBP16.24■□□□□ 0.19
TARDBP-201ENST00000240185 ERC1Q8IUD2 1116 aa16.23■□□□□ 0.19
TARDBP-201ENST00000240185 GNAI2P04899 355 aa16.23■□□□□ 0.19
TARDBP-201ENST00000240185 LUZP1Q86V48 1076 aa16.23■□□□□ 0.19
TARDBP-201ENST00000240185 SYTL4Q96C24 671 aaPredicted RBP16.23■□□□□ 0.19
TARDBP-201ENST00000240185 CARMIL2Q6F5E8 1435 aa16.23■□□□□ 0.19
TARDBP-201ENST00000240185 SLC3A2P08195 630 aaKnown RBP16.23■□□□□ 0.19
TARDBP-201ENST00000240185 NOL7Q9UMY1 257 aaKnown RBP16.23■□□□□ 0.19
TARDBP-201ENST00000240185 SPA17Q15506 151 aa16.23■□□□□ 0.19
TARDBP-201ENST00000240185 PDRG1Q9NUG6 133 aa16.23■□□□□ 0.19
TARDBP-201ENST00000240185 BCAR3O75815 825 aa16.23■□□□□ 0.19
TARDBP-201ENST00000240185 WWC2Q6AWC2 1192 aa16.23■□□□□ 0.19
TARDBP-201ENST00000240185 DYNC1I1O14576 645 aa16.22■□□□□ 0.19
TARDBP-201ENST00000240185 ZNF397Q8NF99 534 aaPredicted RBP16.22■□□□□ 0.19
TARDBP-201ENST00000240185 BCCIPQ9P287 314 aaKnown RBP eCLIP16.22■□□□□ 0.19
TARDBP-201ENST00000240185 AKNAQ7Z591 1439 aa16.22■□□□□ 0.19
TARDBP-201ENST00000240185 TRMT1Q9NXH9 659 aaKnown RBP16.22■□□□□ 0.19
TARDBP-201ENST00000240185 SPECC1Q5M775 1068 aa16.22■□□□□ 0.19
TARDBP-201ENST00000240185 RAI14Q9P0K7 980 aa16.22■□□□□ 0.19
TARDBP-201ENST00000240185 CLIP2Q9UDT6 1046 aa16.22■□□□□ 0.19
TARDBP-201ENST00000240185 BMS1Q14692 1282 aaKnown RBP16.22■□□□□ 0.19
TARDBP-201ENST00000240185 CCDC30Q5VVM6 783 aa16.22■□□□□ 0.19
TARDBP-201ENST00000240185 NOB1Q9ULX3 412 aaKnown RBP16.21■□□□□ 0.19
TARDBP-201ENST00000240185 TRHP20396 242 aaPredicted RBP16.21■□□□□ 0.19
TARDBP-201ENST00000240185 BMP2KQ9NSY1 1161 aaPredicted RBP16.21■□□□□ 0.19
TARDBP-201ENST00000240185 USP25Q9UHP3 1055 aa16.21■□□□□ 0.19
TARDBP-201ENST00000240185 STAMBPO95630 424 aa16.21■□□□□ 0.18
TARDBP-201ENST00000240185 UBE4AQ14139 1066 aa16.21■□□□□ 0.18
TARDBP-201ENST00000240185 ZFP91Q96JP5 570 aaPredicted RBP16.21■□□□□ 0.18
TARDBP-201ENST00000240185 SSBP05455 408 aaKnown RBP eCLIP16.2■□□□□ 0.18
TARDBP-201ENST00000240185 PDIA4P13667 645 aaKnown RBP16.2■□□□□ 0.18
TARDBP-201ENST00000240185 CCDC183Q5T5S1 534 aa16.2■□□□□ 0.18
TARDBP-201ENST00000240185 JAKMIP1Q96N16 626 aaKnown RBP16.2■□□□□ 0.18
TARDBP-201ENST00000240185 SPATA24Q86W54 205 aa16.2■□□□□ 0.18
TARDBP-201ENST00000240185 SSR1P43307 286 aaKnown RBP16.2■□□□□ 0.18
TARDBP-201ENST00000240185 CHD1LQ86WJ1 897 aa16.2■□□□□ 0.18
TARDBP-201ENST00000240185 CCDC69A6NI79 296 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms