RNA–Protein interactions for RNA: ENSMUST00000227819.1

Ldb3-207, Transcript of LIM domain-binding protein 3, mousemouse

BASIC

Gene Ldb3, Length 1,499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-207ENSMUST00000227819 Slc4a1apE9PX68 744 aa19.25■□□□□ 0.67
Ldb3-207ENSMUST00000227819 Ddb1Q3U1J4 1140 aaKnown RBP19.25■□□□□ 0.67
Ldb3-207ENSMUST00000227819 FocadA2AKG8 1798 aa19.24■□□□□ 0.67
Ldb3-207ENSMUST00000227819 Vps33bP59016 617 aa19.24■□□□□ 0.67
Ldb3-207ENSMUST00000227819 Lrit1Q8K099 624 aa19.24■□□□□ 0.67
Ldb3-207ENSMUST00000227819 Slit1Q80TR4 1531 aa19.24■□□□□ 0.67
Ldb3-207ENSMUST00000227819 GalcP54818 684 aa19.22■□□□□ 0.67
Ldb3-207ENSMUST00000227819 Zpr1Q62384 459 aa19.22■□□□□ 0.67
Ldb3-207ENSMUST00000227819 Zcrb1Q9CZ96 217 aaKnown RBP19.22■□□□□ 0.67
Ldb3-207ENSMUST00000227819 Ppfibp2O35711 882 aa19.21■□□□□ 0.67
Ldb3-207ENSMUST00000227819 Ezh2Q61188 746 aaKnown RBP19.21■□□□□ 0.67
Ldb3-207ENSMUST00000227819 Birc3O08863 600 aa19.2■□□□□ 0.66
Ldb3-207ENSMUST00000227819 Ginm1Q91WR6 327 aa19.2■□□□□ 0.66
Ldb3-207ENSMUST00000227819 Plekhd1B2RPU2 505 aa19.19■□□□□ 0.66
Ldb3-207ENSMUST00000227819 Sik1Q60670 779 aa19.19■□□□□ 0.66
Ldb3-207ENSMUST00000227819 Mst1rQ62190 1378 aa19.19■□□□□ 0.66
Ldb3-207ENSMUST00000227819 Zranb3Q6NZP1 1069 aa19.18■□□□□ 0.66
Ldb3-207ENSMUST00000227819 Hoxc9P09633 260 aa19.17■□□□□ 0.66
Ldb3-207ENSMUST00000227819 Vars2Q3U2A8 1060 aa19.17■□□□□ 0.66
Ldb3-207ENSMUST00000227819 Erbb3Q61526 1339 aa19.16■□□□□ 0.66
Ldb3-207ENSMUST00000227819 Exoc5Q3TPX4 708 aa19.16■□□□□ 0.66
Ldb3-207ENSMUST00000227819 Bsdc1Q80Y55 427 aa19.16■□□□□ 0.66
Ldb3-207ENSMUST00000227819 Rab3gap2Q8BMG7 1366 aa19.16■□□□□ 0.66
Ldb3-207ENSMUST00000227819 Snapc4Q8BP86 1333 aa19.16■□□□□ 0.66
Ldb3-207ENSMUST00000227819 Scaf1Q5U4C3 1256 aaKnown RBP19.13■□□□□ 0.65
Ldb3-207ENSMUST00000227819 Sin3aQ60520 1274 aaKnown RBP19.13■□□□□ 0.65
Ldb3-207ENSMUST00000227819 Col15a1O35206 1367 aa19.12■□□□□ 0.65
Ldb3-207ENSMUST00000227819 Fam184bQ0KK56 942 aa19.12■□□□□ 0.65
Ldb3-207ENSMUST00000227819 Pnpla7A2AJ88 1352 aa19.12■□□□□ 0.65
Ldb3-207ENSMUST00000227819 Cwc22Q8C5N3 908 aaKnown RBP19.11■□□□□ 0.65
Ldb3-207ENSMUST00000227819 TkfcQ8VC30 578 aa19.11■□□□□ 0.65
Ldb3-207ENSMUST00000227819 Gm10471E9Q1C7 252 aa19.1■□□□□ 0.65
Ldb3-207ENSMUST00000227819 PsdQ5DTT2 1024 aa19.1■□□□□ 0.65
Ldb3-207ENSMUST00000227819 Cc2d1aQ8K1A6 943 aa19.1■□□□□ 0.65
Ldb3-207ENSMUST00000227819 Arhgap33Q80YF9 1305 aa19.1■□□□□ 0.65
Ldb3-207ENSMUST00000227819 Kcnh4A2A5F7 1018 aa19.09■□□□□ 0.65
Ldb3-207ENSMUST00000227819 Ccne1Q61457 408 aa19.09■□□□□ 0.65
Ldb3-207ENSMUST00000227819 Ahnak2E9PYB0 1738 aaKnown RBP19.09■□□□□ 0.65
Ldb3-207ENSMUST00000227819 Ptpn23Q6PB44 1692 aa19.09■□□□□ 0.65
Ldb3-207ENSMUST00000227819 Arfgef2A2A5R2 1792 aa19.07■□□□□ 0.64
Ldb3-207ENSMUST00000227819 Nsd3Q6P2L6 1439 aa19.07■□□□□ 0.64
Ldb3-207ENSMUST00000227819 Pim2Q62070 370 aa19.07■□□□□ 0.64
Ldb3-207ENSMUST00000227819 Fam50bQ9WTJ8 334 aa19.07■□□□□ 0.64
Ldb3-207ENSMUST00000227819 IbtkQ6ZPR6 1352 aaKnown RBP19.07■□□□□ 0.64
Ldb3-207ENSMUST00000227819 Adgrb1Q3UHD1 1582 aa19.06■□□□□ 0.64
Ldb3-207ENSMUST00000227819 PrxO55103 1391 aa19.06■□□□□ 0.64
Ldb3-207ENSMUST00000227819 Ccdc85cE9Q6B2 420 aa19.05■□□□□ 0.64
Ldb3-207ENSMUST00000227819 Elp1Q7TT37 1333 aaKnown RBP19.05■□□□□ 0.64
Ldb3-207ENSMUST00000227819 Hoxb7P09024 217 aa19.04■□□□□ 0.64
Ldb3-207ENSMUST00000227819 Q8BT18 775 aa19.04■□□□□ 0.64
Ldb3-207ENSMUST00000227819 Afg3l2Q8JZQ2 802 aaKnown RBP19.04■□□□□ 0.64
Ldb3-207ENSMUST00000227819 Pank3Q8R2W9 370 aa19.04■□□□□ 0.64
Ldb3-207ENSMUST00000227819 Smg6P61406 1418 aaKnown RBP19.04■□□□□ 0.64
Ldb3-207ENSMUST00000227819 Parp14Q2EMV9 1817 aa19.04■□□□□ 0.64
Ldb3-207ENSMUST00000227819 Ciz1Q8VEH2 845 aa19.03■□□□□ 0.64
Ldb3-207ENSMUST00000227819 Dcaf11Q91VU6 549 aa19.03■□□□□ 0.64
Ldb3-207ENSMUST00000227819 Tmf1B9EKI3 1091 aa19.03■□□□□ 0.64
Ldb3-207ENSMUST00000227819 Gm21680A0A0G2JGR8 267 aa19.02■□□□□ 0.63
Ldb3-207ENSMUST00000227819 Inpp5dQ9ES52 1191 aa19.02■□□□□ 0.63
Ldb3-207ENSMUST00000227819 Aplp2Q06335 707 aa19.01■□□□□ 0.63
Ldb3-207ENSMUST00000227819 En2P09066 324 aa19■□□□□ 0.63
Ldb3-207ENSMUST00000227819 Speer4bQ9D9F7 267 aa18.98■□□□□ 0.63
Ldb3-207ENSMUST00000227819 Abca3Q8R420 1704 aa18.98■□□□□ 0.63
Ldb3-207ENSMUST00000227819 Magea1O89006 320 aa18.97■□□□□ 0.63
Ldb3-207ENSMUST00000227819 Magea5O89009 320 aa18.97■□□□□ 0.63
Ldb3-207ENSMUST00000227819 Magea2Q9R2A2 320 aa18.97■□□□□ 0.63
Ldb3-207ENSMUST00000227819 Simc1E9Q6E9 1354 aa18.97■□□□□ 0.63
Ldb3-207ENSMUST00000227819 Rad17Q6NXW6 688 aa18.97■□□□□ 0.63
Ldb3-207ENSMUST00000227819 Ankrd13dQ6PD24 605 aa18.97■□□□□ 0.63
Ldb3-207ENSMUST00000227819 Gpr150Q8BL07 427 aa18.97■□□□□ 0.63
Ldb3-207ENSMUST00000227819 Kdm6aO70546 1401 aa18.96■□□□□ 0.63
Ldb3-207ENSMUST00000227819 NefmP08553 848 aa18.96■□□□□ 0.63
Ldb3-207ENSMUST00000227819 Sos2Q02384 1333 aa18.95■□□□□ 0.62
Ldb3-207ENSMUST00000227819 Ppp1r37Q8BKR5 712 aa18.95■□□□□ 0.62
Ldb3-207ENSMUST00000227819 Shank3Q4ACU6 1730 aa18.93■□□□□ 0.62
Ldb3-207ENSMUST00000227819 Kif23E9Q5G3 953 aa18.93■□□□□ 0.62
Ldb3-207ENSMUST00000227819 4930572O03RikQ8C5Y0 211 aa18.92■□□□□ 0.62
Ldb3-207ENSMUST00000227819 Eya1P97767 591 aa18.91■□□□□ 0.62
Ldb3-207ENSMUST00000227819 Larp1Q6ZQ58 1072 aaKnown RBP18.91■□□□□ 0.62
Ldb3-207ENSMUST00000227819 ThemisQ8BGW0 636 aa18.91■□□□□ 0.62
Ldb3-207ENSMUST00000227819 Eif4a2P10630 407 aa18.9■□□□□ 0.62
Ldb3-207ENSMUST00000227819 Zscan10Q3URR7 782 aa18.9■□□□□ 0.62
Ldb3-207ENSMUST00000227819 Rps6ka4Q9Z2B9 773 aa18.9■□□□□ 0.62
Ldb3-207ENSMUST00000227819 Fam198bQ3UPI1 517 aa18.89■□□□□ 0.61
Ldb3-207ENSMUST00000227819 Ubxn2bQ0KL01 331 aa18.88■□□□□ 0.61
Ldb3-207ENSMUST00000227819 Kiaa0319lQ8K135 1048 aa18.88■□□□□ 0.61
Ldb3-207ENSMUST00000227819 ApobrQ8VBT6 942 aa18.88■□□□□ 0.61
Ldb3-207ENSMUST00000227819 Gprasp1Q5U4C1 1347 aa18.87■□□□□ 0.61
Ldb3-207ENSMUST00000227819 AtrnQ9WU60 1428 aa18.86■□□□□ 0.61
Ldb3-207ENSMUST00000227819 Klc3Q91W40 508 aa18.86■□□□□ 0.61
Ldb3-207ENSMUST00000227819 Akt1s1Q9D1F4 257 aa18.86■□□□□ 0.61
Ldb3-207ENSMUST00000227819 PappaQ8R4K8 1624 aa18.85■□□□□ 0.61
Ldb3-207ENSMUST00000227819 Kcna3P16390 528 aa18.85■□□□□ 0.61
Ldb3-207ENSMUST00000227819 Kcnq2Q9Z351 759 aa18.85■□□□□ 0.61
Ldb3-207ENSMUST00000227819 MpripP97434 1024 aa18.84■□□□□ 0.61
Ldb3-207ENSMUST00000227819 Trpc5Q9QX29 975 aa18.84■□□□□ 0.61
Ldb3-207ENSMUST00000227819 Ccnl1Q52KE7 532 aaKnown RBP18.84■□□□□ 0.61
Ldb3-207ENSMUST00000227819 ClspnQ80YR7 1315 aa18.83■□□□□ 0.61
Ldb3-207ENSMUST00000227819 Gm21663A0A0G2JE01 267 aa18.82■□□□□ 0.6
Ldb3-207ENSMUST00000227819 PnisrA2AJT4 805 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms