RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Ppp2r3aB2RXC8 1150 aa12.95□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Mcm10Q0VBD2 885 aa12.95□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Tet3Q8BG87 1668 aa12.95□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 4930407I10RikD3Z5T8 1512 aa12.94□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Camta1A2A891 1682 aa12.94□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Slit2Q9R1B9 1521 aa12.93□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Aldh1l1Q8R0Y6 902 aa12.93□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Cabp2Q9JLK4 216 aa12.93□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Trim30dE9PWL0 497 aa12.93□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 CanxP35564 591 aaKnown RBP12.93□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Q3UPC7 1272 aa12.93□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Ppm1gQ61074 542 aa12.93□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Cavin2Q63918 418 aaKnown RBP12.93□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Sos1Q62245 1319 aa12.92□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 AU019823E9PUQ3 292 aa12.92□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Adgrb1Q3UHD1 1582 aa12.91□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 4930567H17RikQ3V0K5 233 aa12.91□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Dnai1Q8C0M8 701 aa12.91□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 KarsQ99MN1 595 aaKnown RBP12.91□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Armcx1Q9CX83 456 aa12.91□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Idi1P58044 227 aa12.91□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Phlpp2Q8BXA7 1320 aa12.9□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 MarsQ68FL6 902 aaKnown RBP12.9□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 PtprvP70289 1705 aa12.9□□□□□ -0.34
Cpsf3-211ENSMUST00000222968 Parp14Q2EMV9 1817 aa12.89□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Gm6268A2A3U9 297 aa12.89□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Pnmal2G3X9N3 661 aa12.89□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Ecm2Q5FW85 670 aa12.89□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Znf330Q922H9 316 aa12.89□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Stk31Q99MW1 1018 aa12.89□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Ankrd44B2RXR6 993 aa12.89□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Nectin2P32507 530 aa12.89□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 MvpQ9EQK5 861 aa12.89□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 MpripP97434 1024 aa12.88□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Cluap1Q8R3P7 413 aa12.88□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Usp16Q99LG0 825 aa12.88□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Sart3Q9JLI8 962 aaKnown RBP12.88□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Ptpn23Q6PB44 1692 aa12.88□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Ppp1r9bQ6R891 817 aaKnown RBP12.87□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 MlecQ6ZQI3 291 aaKnown RBP12.87□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Tmco5bQ80X59 307 aa12.87□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Nutm1Q8BHP2 1126 aa12.87□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Eif2s2Q99L45 331 aaKnown RBP12.87□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Trpm3Q5F4S9 1721 aa12.87□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Brwd3A2AHJ4 1799 aa12.87□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Nlgn1Q99K10 843 aa12.87□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 FancaQ9JL70 1439 aa12.86□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Gm10563F6WIE4 79 aa12.86□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Tbc1d32Q3URV1 1296 aa12.86□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Mre11Q61216 706 aa12.86□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Klhdc4Q921I2 584 aa12.86□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Hsp90ab1P11499 724 aaKnown RBP12.85□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 SkilQ60665 675 aa12.85□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Rad17Q6NXW6 688 aa12.85□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Dennd6aQ8BH65 605 aa12.85□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 GphnQ8BUV3 769 aaKnown RBP12.85□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Topaz1E5FYH1 1653 aa12.85□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 C3P01027 1663 aa12.85□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Zfp777B9EKF4 885 aa12.85□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Wwc1Q5SXA9 1104 aa12.85□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Scaf1Q5U4C3 1256 aaKnown RBP12.85□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 NgefQ8CHT1 710 aa12.85□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Brd1E9PZ26 1189 aaKnown RBP12.84□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 TmpoQ61033 693 aaKnown RBP12.84□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Frmpd2A0A140LI67 1392 aa12.84□□□□□ -0.35
Cpsf3-211ENSMUST00000222968 Rangap1P46061 589 aaKnown RBP12.83□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Chl1P70232 1209 aa12.83□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Kif24Q6NWW5 1356 aa12.83□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Plin1Q8CGN5 517 aa12.83□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Chmp4bQ9D8B3 224 aaKnown RBP12.83□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 U2surpQ6NV83 1029 aaKnown RBP12.82□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Thsd7aQ69ZU6 1645 aa12.82□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Nckap5lQ6GQX2 1323 aa12.82□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Eya1P97767 591 aa12.82□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Sox12Q04890 314 aa12.82□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Kif18aQ91WD7 886 aa12.82□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Tmem94Q7TSH8 1360 aa12.81□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Map7O88735 730 aa12.81□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 LifrP42703 1092 aa12.81□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Ano8Q6PB70 1060 aa12.81□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Phf23Q8BSN5 401 aa12.81□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Aldh1l2Q8K009 923 aa12.81□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Ap3b2Q9JME5 1082 aa12.81□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Rimbp3Q3V0F0 1606 aa12.81□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Col14a1Q80X19 1797 aa12.81□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Sipa1l2Q80TE4 1722 aa12.81□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Senp3Q9EP97 568 aaKnown RBP12.8□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Robo1O89026 1612 aa12.8□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Ahnak2E9PYB0 1738 aaKnown RBP12.79□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Gm21190A0A0G2JGJ6 266 aa12.79□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Sptbn5F6UCX4 1208 aa12.79□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Rabep1O35551 862 aa12.79□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Hoxc9P09633 260 aa12.79□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Ric3Q8BPM6 367 aa12.79□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Cabp4Q8VHC5 271 aa12.79□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Igsf1Q7TQA1 1317 aa12.79□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Trim27Q62158 513 aa12.78□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Cetn4Q8K4K1 168 aa12.78□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Arfgef2A2A5R2 1792 aa12.78□□□□□ -0.36
Cpsf3-211ENSMUST00000222968 Msh6P54276 1358 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms