RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Larp1bA0A0A6YXJ7 370 aaKnown RBP11□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Syce3B5KM66 88 aa11□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Kcnj4P52189 445 aa11□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Ppip5k2Q6ZQB6 1129 aa11□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Q8C5K5 320 aa11□□□□□ -0.65
Scn8a-213ENSMUST00000201549 IkQ9Z1M8 557 aaKnown RBP11□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Znf428Q8C1M2 176 aa10.99□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Tex13c2A0A0G2JGA3 530 aa10.99□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Chmp7Q8R1T1 451 aa10.99□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Cdk13Q69ZA1 1511 aaKnown RBP10.99□□□□□ -0.65
Scn8a-213ENSMUST00000201549 EzrP26040 586 aaKnown RBP10.99□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Fkbp4P30416 458 aa10.99□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Ssr1Q9CY50 286 aaKnown RBP10.98□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Gm14025A2AP89 1413 aa10.98□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Duxf3A0A0N4SV92 674 aa10.98□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Secisbp2lQ6A098 1086 aaKnown RBP10.98□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Adgrb2Q8CGM1 1561 aa10.98□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Serpina10Q8R121 448 aa10.98□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Fyb1O35601 819 aa10.98□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Pdia4P08003 638 aaKnown RBP10.97□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Rec8Q8C5S7 591 aa10.97□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Hmgn5Q9JL35 406 aa10.97□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Ttc21bQ0HA38 1315 aa10.97□□□□□ -0.65
Scn8a-213ENSMUST00000201549 TprnA2AI08 749 aaKnown RBP10.97□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Aplp1Q03157 653 aa10.97□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Map3k13Q1HKZ5 959 aa10.97□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Gsdma3Q5Y4Y6 464 aa10.97□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Cplx1P63040 134 aa10.97□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Gpatch3Q8BIY1 525 aa10.97□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Ccar2Q8VDP4 922 aaKnown RBP10.97□□□□□ -0.65
Scn8a-213ENSMUST00000201549 PhaxQ9JJT9 385 aaKnown RBP10.97□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Rapgef6Q5NCJ1 1609 aa10.97□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Plekhm2Q80TQ5 1018 aa10.97□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Cchcr1Q8K2I2 770 aa10.97□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Fgd6Q69ZL1 1399 aa10.96□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Prex2Q3LAC4 1598 aa10.96□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Pabpn1Q8CCS6 302 aaKnown RBP10.96□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Mug2P28666 1451 aa10.96□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Atp7aQ64430 1491 aa10.96□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Cep89Q9CZX2 791 aa10.96□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Cnnm3Q32NY4 713 aa10.96□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Samm50Q8BGH2 469 aa10.96□□□□□ -0.65
Scn8a-213ENSMUST00000201549 Terf2O35144 541 aa10.96□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Fez1Q8K0X8 392 aa10.96□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Srek1Q8BZX4 494 aaKnown RBP10.96□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Adcy10Q8C0T9 1614 aa10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Atf3Q60765 181 aa10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Nbr1P97432 988 aa10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Cfap65Q3V0B4 1847 aa10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Tmx4Q8C0L0 335 aa10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Dusp9Q7TNL7 452 aa10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Dmrt2Q8BG36 561 aa10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Aldh1l1Q8R0Y6 902 aa10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Sirt1Q923E4 737 aa10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Ca8P28651 291 aa10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Mcm10Q0VBD2 885 aa10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Fchsd2Q3USJ8 740 aa10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Tbc1d9Q3UYK3 1264 aa10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Zranb1Q7M760 708 aa10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Afap1Q80YS6 731 aa10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 L1td1Q587J6 782 aaKnown RBP10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Q9D9S1 216 aa10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Psma5Q9Z2U1 241 aaKnown RBP10.95□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Frmd3Q8BHD4 595 aa10.94□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Smc4Q8CG47 1286 aa10.94□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Rbm5Q91YE7 815 aaKnown RBP10.94□□□□□ -0.66
Scn8a-213ENSMUST00000201549 CastP51125 788 aa10.94□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Ptpdc1Q6NZK8 747 aa10.94□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Rufy1Q8BIJ7 712 aa10.94□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Exoc6bA6H5Z3 810 aa10.94□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Kif3aP28741 701 aa10.94□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Gas2l2Q5SSG4 860 aa10.94□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Dennd6aQ8BH65 605 aa10.94□□□□□ -0.66
Scn8a-213ENSMUST00000201549 RalgapbQ8BQZ4 1484 aa10.94□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Caskin1Q6P9K8 1431 aa10.94□□□□□ -0.66
Scn8a-213ENSMUST00000201549 IbtkQ6ZPR6 1352 aaKnown RBP10.93□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Mlh3A0A1Y7VMP7 1443 aa10.93□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Tbc1d32Q3URV1 1296 aa10.93□□□□□ -0.66
Scn8a-213ENSMUST00000201549 HypkQ9CR41 129 aa10.93□□□□□ -0.66
Scn8a-213ENSMUST00000201549 PdcQ9QW08 244 aa10.93□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Wdr7Q920I9 1489 aa10.93□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Q3UPC7 1272 aa10.93□□□□□ -0.66
Scn8a-213ENSMUST00000201549 TatQ8QZR1 454 aa10.93□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Peg3Q3URU2 1571 aa10.93□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Uspl1Q3ULM6 1089 aa10.93□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Tmc1Q8R4P5 757 aa10.93□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Slc12a5Q91V14 1138 aa10.93□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Gigyf1Q99MR1 1044 aaKnown RBP10.93□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Phlpp2Q8BXA7 1320 aa10.93□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Gm10471E9Q1C7 252 aa10.92□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Kif20aP97329 887 aa10.92□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Tpm1P58771 284 aa10.92□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Sparcl1P70663 650 aa10.92□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Nol8Q3UHX0 1147 aaKnown RBP10.92□□□□□ -0.66
Scn8a-213ENSMUST00000201549 NaspQ99MD9 773 aaKnown RBP10.92□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Ubxn4Q8VCH8 506 aa10.92□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Trerf1Q8BXJ2 1205 aa10.92□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Pof1bQ8K4L4 587 aa10.92□□□□□ -0.66
Scn8a-213ENSMUST00000201549 Lmo7E9PYF4 1699 aaKnown RBP10.92□□□□□ -0.66
Scn8a-213ENSMUST00000201549 TnmdQ9EP64 317 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 167.9 ms