RNA–Protein interactions for RNA: ENSMUST00000199571.4

Csde1-216, Transcript of Cold shock domain-containing protein E1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Csde1, Length 3,123 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Csde1-216ENSMUST00000199571 Gm16486A0A1D5RMD1 1434 aa10.01□□□□□ -0.81
Csde1-216ENSMUST00000199571 Adgrl1Q80TR1 1466 aa10.01□□□□□ -0.81
Csde1-216ENSMUST00000199571 SkilQ60665 675 aa10□□□□□ -0.81
Csde1-216ENSMUST00000199571 U2surpQ6NV83 1029 aaKnown RBP10□□□□□ -0.81
Csde1-216ENSMUST00000199571 Smarca5Q91ZW3 1051 aaKnown RBP10□□□□□ -0.81
Csde1-216ENSMUST00000199571 Ush1cQ9ES64 910 aa10□□□□□ -0.81
Csde1-216ENSMUST00000199571 Ttc41Q692V3 1318 aa10□□□□□ -0.81
Csde1-216ENSMUST00000199571 Ssh2Q5SW75 1423 aa10□□□□□ -0.81
Csde1-216ENSMUST00000199571 Atp2b2Q9R0K7 1198 aa10□□□□□ -0.81
Csde1-216ENSMUST00000199571 Tubgcp6G5E8P0 1769 aa10□□□□□ -0.81
Csde1-216ENSMUST00000199571 Atl3Q91YH5 541 aa10□□□□□ -0.81
Csde1-216ENSMUST00000199571 Dot1lQ6XZL8 1540 aa9.99□□□□□ -0.81
Csde1-216ENSMUST00000199571 Iqgap1Q9JKF1 1657 aaKnown RBP9.99□□□□□ -0.81
Csde1-216ENSMUST00000199571 KnstrnQ9D9Z1 312 aaKnown RBP9.99□□□□□ -0.81
Csde1-216ENSMUST00000199571 Rbm25B2RY56 838 aaKnown RBP9.99□□□□□ -0.81
Csde1-216ENSMUST00000199571 Babam1Q3UI43 333 aa9.99□□□□□ -0.81
Csde1-216ENSMUST00000199571 Dmrt2Q8BG36 561 aa9.99□□□□□ -0.81
Csde1-216ENSMUST00000199571 Spag9Q58A65 1321 aaKnown RBP9.98□□□□□ -0.81
Csde1-216ENSMUST00000199571 Casq1O09165 405 aa9.98□□□□□ -0.81
Csde1-216ENSMUST00000199571 G3bp1P97855 465 aaKnown RBP9.98□□□□□ -0.81
Csde1-216ENSMUST00000199571 Abcc6Q9R1S7 1498 aa9.98□□□□□ -0.81
Csde1-216ENSMUST00000199571 Sema6bO54951 886 aa9.98□□□□□ -0.81
Csde1-216ENSMUST00000199571 Gm32742A0A1B0GT42 1604 aa9.98□□□□□ -0.81
Csde1-216ENSMUST00000199571 Becn1O88597 448 aa9.97□□□□□ -0.81
Csde1-216ENSMUST00000199571 Pcmtd1P59913 357 aa9.97□□□□□ -0.81
Csde1-216ENSMUST00000199571 Amigo3Q8C2S7 508 aa9.97□□□□□ -0.81
Csde1-216ENSMUST00000199571 Naa30Q8CES0 364 aa9.97□□□□□ -0.81
Csde1-216ENSMUST00000199571 Znf518aB2RRF6 1478 aaKnown RBP9.97□□□□□ -0.81
Csde1-216ENSMUST00000199571 Plcd3Q8K2J0 785 aa9.97□□□□□ -0.81
Csde1-216ENSMUST00000199571 Triml2E9PW10 424 aa9.96□□□□□ -0.81
Csde1-216ENSMUST00000199571 Kif3bQ61771 747 aa9.96□□□□□ -0.81
Csde1-216ENSMUST00000199571 Pdcd11Q6NS46 1862 aaKnown RBP9.96□□□□□ -0.81
Csde1-216ENSMUST00000199571 KdrP35918 1367 aa9.96□□□□□ -0.81
Csde1-216ENSMUST00000199571 Brd1E9PZ26 1189 aaKnown RBP9.96□□□□□ -0.82
Csde1-216ENSMUST00000199571 4931400O07RikQ9D4M5 137 aa9.96□□□□□ -0.82
Csde1-216ENSMUST00000199571 Atf7ipQ7TT18 1306 aa9.96□□□□□ -0.82
Csde1-216ENSMUST00000199571 Pnma3Q8JZW8 466 aa9.96□□□□□ -0.82
Csde1-216ENSMUST00000199571 Nos1Q9Z0J4 1429 aa9.95□□□□□ -0.82
Csde1-216ENSMUST00000199571 Gm10093D3YYI8 482 aa9.95□□□□□ -0.82
Csde1-216ENSMUST00000199571 Hdac1O09106 482 aaKnown RBP9.95□□□□□ -0.82
Csde1-216ENSMUST00000199571 Gse1Q3U3C9 1213 aa9.95□□□□□ -0.82
Csde1-216ENSMUST00000199571 Chd1lQ9CXF7 900 aa9.95□□□□□ -0.82
Csde1-216ENSMUST00000199571 Exosc9Q9JHI7 438 aaKnown RBP9.95□□□□□ -0.82
Csde1-216ENSMUST00000199571 Phactr2B1AVP0 632 aa9.95□□□□□ -0.82
Csde1-216ENSMUST00000199571 Zscan25B2RX31 543 aa9.95□□□□□ -0.82
Csde1-216ENSMUST00000199571 Wdr63B2RY71 923 aa9.95□□□□□ -0.82
Csde1-216ENSMUST00000199571 Dnajc14Q921R4 703 aa9.95□□□□□ -0.82
Csde1-216ENSMUST00000199571 Irx6Q9ER75 438 aa9.94□□□□□ -0.82
Csde1-216ENSMUST00000199571 Rcan3Q9JKK0 239 aa9.94□□□□□ -0.82
Csde1-216ENSMUST00000199571 Qtrt2B8ZXI1 415 aa9.94□□□□□ -0.82
Csde1-216ENSMUST00000199571 CastP51125 788 aa9.94□□□□□ -0.82
Csde1-216ENSMUST00000199571 Klhdc4Q921I2 584 aa9.94□□□□□ -0.82
Csde1-216ENSMUST00000199571 Cntnap1O54991 1385 aa9.94□□□□□ -0.82
Csde1-216ENSMUST00000199571 Ppip5k1A2ARP1 1436 aa9.94□□□□□ -0.82
Csde1-216ENSMUST00000199571 Pik3c2aQ61194 1686 aa9.94□□□□□ -0.82
Csde1-216ENSMUST00000199571 Q3UPC7 1272 aa9.93□□□□□ -0.82
Csde1-216ENSMUST00000199571 Brinp3Q499E0 766 aa9.93□□□□□ -0.82
Csde1-216ENSMUST00000199571 Znf316Q6PGE4 1016 aa9.93□□□□□ -0.82
Csde1-216ENSMUST00000199571 Olfml1Q8BSH2 233 aa9.93□□□□□ -0.82
Csde1-216ENSMUST00000199571 Tshz3Q8CGV9 1081 aa9.93□□□□□ -0.82
Csde1-216ENSMUST00000199571 FanclQ9CR14 375 aa9.93□□□□□ -0.82
Csde1-216ENSMUST00000199571 Rgs17Q9QZB0 210 aa9.93□□□□□ -0.82
Csde1-216ENSMUST00000199571 Lamc1P02468 1607 aaKnown RBP9.93□□□□□ -0.82
Csde1-216ENSMUST00000199571 Cald1E9QA15 768 aaKnown RBP9.93□□□□□ -0.82
Csde1-216ENSMUST00000199571 Frmd3Q8BHD4 595 aa9.93□□□□□ -0.82
Csde1-216ENSMUST00000199571 Cdc42bpbQ7TT50 1713 aa9.92□□□□□ -0.82
Csde1-216ENSMUST00000199571 Mcm10Q0VBD2 885 aa9.92□□□□□ -0.82
Csde1-216ENSMUST00000199571 Puf60Q3UEB3 564 aaKnown RBP9.92□□□□□ -0.82
Csde1-216ENSMUST00000199571 Zbtb22Q9Z0G7 638 aa9.92□□□□□ -0.82
Csde1-216ENSMUST00000199571 PtprvP70289 1705 aa9.92□□□□□ -0.82
Csde1-216ENSMUST00000199571 Birc3O08863 600 aa9.92□□□□□ -0.82
Csde1-216ENSMUST00000199571 MsnP26041 577 aaKnown RBP9.92□□□□□ -0.82
Csde1-216ENSMUST00000199571 Q9D2X8 372 aa9.92□□□□□ -0.82
Csde1-216ENSMUST00000199571 CarsQ9ER72 831 aaKnown RBP9.92□□□□□ -0.82
Csde1-216ENSMUST00000199571 Map4k4P97820 1233 aaKnown RBP9.91□□□□□ -0.82
Csde1-216ENSMUST00000199571 PtprgQ05909 1442 aa9.91□□□□□ -0.82
Csde1-216ENSMUST00000199571 AU022751B1B0V2 589 aa9.91□□□□□ -0.82
Csde1-216ENSMUST00000199571 Cavin1O54724 392 aa9.91□□□□□ -0.82
Csde1-216ENSMUST00000199571 Ppip5k2Q6ZQB6 1129 aa9.91□□□□□ -0.82
Csde1-216ENSMUST00000199571 Zdhhc9P59268 364 aa9.9□□□□□ -0.82
Csde1-216ENSMUST00000199571 Kank4Q6P9J5 1016 aa9.9□□□□□ -0.82
Csde1-216ENSMUST00000199571 Plekhm2Q80TQ5 1018 aa9.9□□□□□ -0.82
Csde1-216ENSMUST00000199571 Rbm42Q91V81 474 aaKnown RBP9.9□□□□□ -0.82
Csde1-216ENSMUST00000199571 Aifm3Q3TY86 605 aa9.9□□□□□ -0.82
Csde1-216ENSMUST00000199571 Nom1Q3UFM5 854 aaKnown RBP9.9□□□□□ -0.82
Csde1-216ENSMUST00000199571 EappQ5BU09 281 aa9.9□□□□□ -0.82
Csde1-216ENSMUST00000199571 Fez1Q8K0X8 392 aa9.9□□□□□ -0.82
Csde1-216ENSMUST00000199571 Polr3gQ6NXY9 223 aa9.89□□□□□ -0.83
Csde1-216ENSMUST00000199571 Prune1Q8BIW1 454 aa9.89□□□□□ -0.83
Csde1-216ENSMUST00000199571 Nhsl1Q8CAF4 1587 aa9.89□□□□□ -0.83
Csde1-216ENSMUST00000199571 Atp2b3Q0VF55 1220 aa9.89□□□□□ -0.83
Csde1-216ENSMUST00000199571 E4f1Q8CCE9 783 aa9.89□□□□□ -0.83
Csde1-216ENSMUST00000199571 Gtf3c5Q8R2T8 520 aa9.89□□□□□ -0.83
Csde1-216ENSMUST00000199571 MypopQ8R4U1 393 aa9.89□□□□□ -0.83
Csde1-216ENSMUST00000199571 Caskin1Q6P9K8 1431 aa9.89□□□□□ -0.83
Csde1-216ENSMUST00000199571 Scaf1Q5U4C3 1256 aaKnown RBP9.89□□□□□ -0.83
Csde1-216ENSMUST00000199571 Zpr1Q62384 459 aa9.89□□□□□ -0.83
Csde1-216ENSMUST00000199571 Zkscan1Q8BGS3 561 aaKnown RBP9.89□□□□□ -0.83
Csde1-216ENSMUST00000199571 Gripap1Q8VD04 806 aa9.89□□□□□ -0.83
Csde1-216ENSMUST00000199571 Adamts13Q769J6 1426 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms